RNA–Protein interactions for RNA: ENST00000565995.5

RNF40-208, Transcript of ring finger protein 40, humanhuman

TSL 4

Gene RNF40, Length 586 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-208ENST00000565995 Q6ZUG5 572 aa14.29□□□□□ -0.12
RNF40-208ENST00000565995 SMG8Q8ND04 991 aaKnown RBP14.29□□□□□ -0.12
RNF40-208ENST00000565995 TBCKQ8TEA7 893 aa14.29□□□□□ -0.12
RNF40-208ENST00000565995 PHKBQ93100 1093 aa14.29□□□□□ -0.12
RNF40-208ENST00000565995 SH2D3AQ9BRG2 576 aa14.29□□□□□ -0.12
RNF40-208ENST00000565995 MINDY3Q9H8M7 445 aa14.29□□□□□ -0.12
RNF40-208ENST00000565995 FNIP2Q9P278 1114 aa14.29□□□□□ -0.12
RNF40-208ENST00000565995 ZFP37Q9Y6Q3 630 aaPredicted RBP14.29□□□□□ -0.12
RNF40-208ENST00000565995 ASAP2O43150 1006 aa14.28□□□□□ -0.12
RNF40-208ENST00000565995 GLUD1P00367 558 aa14.28□□□□□ -0.12
RNF40-208ENST00000565995 POMCP01189 267 aa14.28□□□□□ -0.12
RNF40-208ENST00000565995 SP9P0CG40 484 aa14.28□□□□□ -0.12
RNF40-208ENST00000565995 LAMP2P13473 410 aa14.28□□□□□ -0.12
RNF40-208ENST00000565995 GBP2P32456 591 aaPredicted RBP14.28□□□□□ -0.12
RNF40-208ENST00000565995 GLUD2P49448 558 aa14.28□□□□□ -0.12
RNF40-208ENST00000565995 STARD6P59095 220 aa14.28□□□□□ -0.12
RNF40-208ENST00000565995 AKAP17AQ02040 695 aaKnown RBP14.28□□□□□ -0.12
RNF40-208ENST00000565995 PUM1Q14671 1186 aaKnown RBP eCLIP14.28□□□□□ -0.12
RNF40-208ENST00000565995 PDCD11Q14690 1871 aaKnown RBP14.28□□□□□ -0.12
RNF40-208ENST00000565995 ZC3H14Q6PJT7 736 aaKnown RBP14.28□□□□□ -0.12
RNF40-208ENST00000565995 POTEGQ6S5H5 508 aa14.28□□□□□ -0.12
RNF40-208ENST00000565995 FAM177A1Q8N128 213 aaPredicted RBP14.28□□□□□ -0.12
RNF40-208ENST00000565995 PRPF31Q8WWY3 499 aaKnown RBP14.28□□□□□ -0.12
RNF40-208ENST00000565995 NLRP4Q96MN2 994 aa14.28□□□□□ -0.12
RNF40-208ENST00000565995 NT5C3AQ9H0P0 336 aa14.28□□□□□ -0.12
RNF40-208ENST00000565995 TBC1D17Q9HA65 648 aa14.28□□□□□ -0.12
RNF40-208ENST00000565995 ZDHHC7Q9NXF8 308 aa14.28□□□□□ -0.12
RNF40-208ENST00000565995 DLL3Q9NYJ7 618 aa14.28□□□□□ -0.12
RNF40-208ENST00000565995 SIT1Q9Y3P8 196 aa14.28□□□□□ -0.12
RNF40-208ENST00000565995 NCOR2Q9Y618 2525 aa14.28□□□□□ -0.12
RNF40-208ENST00000565995 EPG5Q9HCE0 2579 aa14.27□□□□□ -0.13
RNF40-208ENST00000565995 DKC1O60832 514 aaKnown RBP eCLIP14.27□□□□□ -0.13
RNF40-208ENST00000565995 RFPL2O75678 378 aa14.27□□□□□ -0.13
RNF40-208ENST00000565995 AXLP30530 894 aa14.27□□□□□ -0.13
RNF40-208ENST00000565995 QARSP47897 775 aaKnown RBP14.27□□□□□ -0.13
RNF40-208ENST00000565995 AK2P54819 239 aa14.27□□□□□ -0.13
RNF40-208ENST00000565995 PPP2R5CQ13362 524 aa14.27□□□□□ -0.13
RNF40-208ENST00000565995 HTR4Q13639 388 aa14.27□□□□□ -0.13
RNF40-208ENST00000565995 ZNF528Q3MIS6 628 aa14.27□□□□□ -0.13
RNF40-208ENST00000565995 C1orf210Q8IVY1 113 aa14.27□□□□□ -0.13
RNF40-208ENST00000565995 SUMF1Q8NBK3 374 aa14.27□□□□□ -0.13
RNF40-208ENST00000565995 GPR152Q8TDT2 470 aa14.27□□□□□ -0.13
RNF40-208ENST00000565995 SMG7Q92540 1137 aaKnown RBP14.27□□□□□ -0.13
RNF40-208ENST00000565995 BRF1Q92994 677 aa14.27□□□□□ -0.13
RNF40-208ENST00000565995 PRKD2Q9BZL6 878 aa14.27□□□□□ -0.13
RNF40-208ENST00000565995 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP14.27□□□□□ -0.13
RNF40-208ENST00000565995 VPS54Q9P1Q0 977 aa14.27□□□□□ -0.13
RNF40-208ENST00000565995 CA14Q9ULX7 337 aa14.27□□□□□ -0.13
RNF40-208ENST00000565995 PCDHA4Q9UN74 947 aa14.27□□□□□ -0.13
RNF40-208ENST00000565995 R4GN57 208 aa14.27□□□□□ -0.13
RNF40-208ENST00000565995 TPRP12270 2363 aaKnown RBP14.26□□□□□ -0.13
RNF40-208ENST00000565995 ZMYM2Q9UBW7 1377 aa14.26□□□□□ -0.13
RNF40-208ENST00000565995 MED19A0JLT2 244 aaPredicted RBP14.26□□□□□ -0.13
RNF40-208ENST00000565995 ARL5CA6NH57 179 aa14.26□□□□□ -0.13
RNF40-208ENST00000565995 STK25O00506 426 aa14.26□□□□□ -0.13
RNF40-208ENST00000565995 C2CD2LO14523 706 aa14.26□□□□□ -0.13
RNF40-208ENST00000565995 GAS2O43903 313 aaKnown RBP14.26□□□□□ -0.13
RNF40-208ENST00000565995 TDP2O95551 362 aa14.26□□□□□ -0.13
RNF40-208ENST00000565995 CPA1P15085 419 aa14.26□□□□□ -0.13
RNF40-208ENST00000565995 RFC5P40937 340 aa14.26□□□□□ -0.13
RNF40-208ENST00000565995 FGD1P98174 961 aa14.26□□□□□ -0.13
RNF40-208ENST00000565995 POU5F1BQ06416 359 aa14.26□□□□□ -0.13
RNF40-208ENST00000565995 LAMTOR4Q0VGL1 99 aa14.26□□□□□ -0.13
RNF40-208ENST00000565995 DGLUCYQ7Z3D6 616 aa14.26□□□□□ -0.13
RNF40-208ENST00000565995 IFNLR1Q8IU57 520 aaPredicted RBP14.26□□□□□ -0.13
RNF40-208ENST00000565995 KIAA2013Q8IYS2 634 aa14.26□□□□□ -0.13
RNF40-208ENST00000565995 MAML2Q8IZL2 1156 aaPredicted RBP14.26□□□□□ -0.13
RNF40-208ENST00000565995 ZNF579Q8NAF0 562 aaKnown RBP14.26□□□□□ -0.13
RNF40-208ENST00000565995 DAGLBQ8NCG7 672 aa14.26□□□□□ -0.13
RNF40-208ENST00000565995 KCNG4Q8TDN1 519 aa14.26□□□□□ -0.13
RNF40-208ENST00000565995 PSPC1Q8WXF1 523 aaKnown RBP14.26□□□□□ -0.13
RNF40-208ENST00000565995 SLC7A3Q8WY07 619 aa14.26□□□□□ -0.13
RNF40-208ENST00000565995 RUBCNQ92622 972 aa14.26□□□□□ -0.13
RNF40-208ENST00000565995 DDX23Q9BUQ8 820 aaKnown RBP14.26□□□□□ -0.13
RNF40-208ENST00000565995 ARHGEF3Q9NR81 526 aa14.26□□□□□ -0.13
RNF40-208ENST00000565995 MIOSQ9NXC5 875 aa14.26□□□□□ -0.13
RNF40-208ENST00000565995 NAP1L2Q9ULW6 460 aaPredicted RBP14.26□□□□□ -0.13
RNF40-208ENST00000565995 IPPQ9Y573 584 aa14.26□□□□□ -0.13
RNF40-208ENST00000565995 EML1O00423 815 aa14.25□□□□□ -0.13
RNF40-208ENST00000565995 TGM5O43548 720 aa14.25□□□□□ -0.13
RNF40-208ENST00000565995 P4HBP07237 508 aaKnown RBP14.25□□□□□ -0.13
RNF40-208ENST00000565995 SRGAP2CP0DJJ0 459 aa14.25□□□□□ -0.13
RNF40-208ENST00000565995 ITGA4P13612 1032 aa14.25□□□□□ -0.13
RNF40-208ENST00000565995 GLULP15104 373 aa14.25□□□□□ -0.13
RNF40-208ENST00000565995 PDIA3P30101 505 aaKnown RBP14.25□□□□□ -0.13
RNF40-208ENST00000565995 NPEPPSP55786 919 aa14.25□□□□□ -0.13
RNF40-208ENST00000565995 NLRP5P59047 1200 aa14.25□□□□□ -0.13
RNF40-208ENST00000565995 NPY5RQ15761 445 aa14.25□□□□□ -0.13
RNF40-208ENST00000565995 PLA2G4FQ68DD2 849 aa14.25□□□□□ -0.13
RNF40-208ENST00000565995 GALNT17Q6IS24 598 aa14.25□□□□□ -0.13
RNF40-208ENST00000565995 DCLRE1AQ6PJP8 1040 aa14.25□□□□□ -0.13
RNF40-208ENST00000565995 FERMT3Q86UX7 667 aa14.25□□□□□ -0.13
RNF40-208ENST00000565995 C4orf19Q8IY42 314 aa14.25□□□□□ -0.13
RNF40-208ENST00000565995 GSTCDQ8NEC7 633 aa14.25□□□□□ -0.13
RNF40-208ENST00000565995 PJA1Q8NG27 643 aa14.25□□□□□ -0.13
RNF40-208ENST00000565995 TCP11Q8WWU5 503 aa14.25□□□□□ -0.13
RNF40-208ENST00000565995 CCDC51Q96ER9 411 aa14.25□□□□□ -0.13
RNF40-208ENST00000565995 FAM20AQ96MK3 541 aa14.25□□□□□ -0.13
RNF40-208ENST00000565995 COLEC11Q9BWP8 271 aa14.25□□□□□ -0.13
RNF40-208ENST00000565995 SLC26A6Q9BXS9 759 aa14.25□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms