RNA–Protein interactions for RNA: ENST00000565559.5

CAPN3-215, Transcript of calpain 3, humanhuman

TSL 3

Gene CAPN3, Length 711 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-215ENST00000565559 HIP1O00291 1037 aa12.6□□□□□ -0.39
CAPN3-215ENST00000565559 C1QTNF9P0C862 333 aa12.6□□□□□ -0.39
CAPN3-215ENST00000565559 CD72P21854 359 aa12.6□□□□□ -0.39
CAPN3-215ENST00000565559 KIF5BP33176 963 aa12.6□□□□□ -0.39
CAPN3-215ENST00000565559 SLC11A1P49279 550 aa12.6□□□□□ -0.39
CAPN3-215ENST00000565559 SIM2Q14190 667 aaPredicted RBP12.6□□□□□ -0.39
CAPN3-215ENST00000565559 AASDHQ4L235 1098 aaPredicted RBP12.6□□□□□ -0.39
CAPN3-215ENST00000565559 PARM1Q6UWI2 310 aa12.6□□□□□ -0.39
CAPN3-215ENST00000565559 ZNF852Q6ZMS4 543 aa12.6□□□□□ -0.39
CAPN3-215ENST00000565559 TPRG1Q6ZUI0 275 aa12.6□□□□□ -0.39
CAPN3-215ENST00000565559 KDF1Q8NAX2 398 aaPredicted RBP12.6□□□□□ -0.39
CAPN3-215ENST00000565559 URGCPQ8TCY9 931 aa12.6□□□□□ -0.39
CAPN3-215ENST00000565559 FGF14Q92915 247 aa12.6□□□□□ -0.39
CAPN3-215ENST00000565559 ZNF707Q96C28 371 aaPredicted RBP12.6□□□□□ -0.39
CAPN3-215ENST00000565559 RPS6KC1Q96S38 1066 aa12.6□□□□□ -0.39
CAPN3-215ENST00000565559 PLEKHA4Q9H4M7 779 aa12.6□□□□□ -0.39
CAPN3-215ENST00000565559 PSTPIP2Q9H939 334 aa12.6□□□□□ -0.39
CAPN3-215ENST00000565559 ZNF302Q9NR11 478 aa12.6□□□□□ -0.39
CAPN3-215ENST00000565559 FAM217BQ9NTX9 383 aaPredicted RBP12.6□□□□□ -0.39
CAPN3-215ENST00000565559 ZDHHC7Q9NXF8 308 aa12.6□□□□□ -0.39
CAPN3-215ENST00000565559 CEP131Q9UPN4 1083 aa12.6□□□□□ -0.39
CAPN3-215ENST00000565559 ASPMQ8IZT6 3477 aa12.6□□□□□ -0.39
CAPN3-215ENST00000565559 IGKV6D-21A0A0A0MT36 114 aa12.59□□□□□ -0.39
CAPN3-215ENST00000565559 ERICH2A1L162 156 aa12.59□□□□□ -0.39
CAPN3-215ENST00000565559 MAGEB2O15479 319 aa12.59□□□□□ -0.39
CAPN3-215ENST00000565559 TEX28O15482 410 aa12.59□□□□□ -0.39
CAPN3-215ENST00000565559 LILRB3O75022 631 aa12.59□□□□□ -0.39
CAPN3-215ENST00000565559 ATG7O95352 703 aa12.59□□□□□ -0.39
CAPN3-215ENST00000565559 SOD2P04179 222 aa12.59□□□□□ -0.39
CAPN3-215ENST00000565559 MYBP10242 640 aa12.59□□□□□ -0.39
CAPN3-215ENST00000565559 GSPT1P15170 499 aaKnown RBP12.59□□□□□ -0.39
CAPN3-215ENST00000565559 SDSP20132 328 aa12.59□□□□□ -0.39
CAPN3-215ENST00000565559 FSHRP23945 695 aa12.59□□□□□ -0.39
CAPN3-215ENST00000565559 PHKA2P46019 1235 aa12.59□□□□□ -0.39
CAPN3-215ENST00000565559 LIMK1P53667 647 aa12.59□□□□□ -0.39
CAPN3-215ENST00000565559 MTAPQ13126 283 aa12.59□□□□□ -0.39
CAPN3-215ENST00000565559 SEC23AQ15436 765 aa12.59□□□□□ -0.39
CAPN3-215ENST00000565559 MIS18BP1Q6P0N0 1132 aa12.59□□□□□ -0.39
CAPN3-215ENST00000565559 LRSAM1Q6UWE0 723 aa12.59□□□□□ -0.39
CAPN3-215ENST00000565559 FAM193BQ96PV7 902 aaPredicted RBP12.59□□□□□ -0.39
CAPN3-215ENST00000565559 IER2Q9BTL4 223 aa12.59□□□□□ -0.39
CAPN3-215ENST00000565559 RPP25Q9BUL9 199 aaKnown RBP12.59□□□□□ -0.39
CAPN3-215ENST00000565559 NT5C3AQ9H0P0 336 aa12.59□□□□□ -0.39
CAPN3-215ENST00000565559 ADAMTS10Q9H324 1103 aa12.59□□□□□ -0.39
CAPN3-215ENST00000565559 CHST12Q9NRB3 414 aa12.59□□□□□ -0.39
CAPN3-215ENST00000565559 DNAJB4Q9UDY4 337 aa12.59□□□□□ -0.39
CAPN3-215ENST00000565559 CDH7Q9ULB5 785 aa12.59□□□□□ -0.39
CAPN3-215ENST00000565559 FRYQ5TBA9 3013 aa12.59□□□□□ -0.39
CAPN3-215ENST00000565559 PATJQ8NI35 1801 aa12.59□□□□□ -0.39
CAPN3-215ENST00000565559 FLNBO75369 2602 aaKnown RBP12.58□□□□□ -0.39
CAPN3-215ENST00000565559 LAMA4Q16363 1823 aa12.58□□□□□ -0.4
CAPN3-215ENST00000565559 ZBTB42B2RXF5 422 aa12.58□□□□□ -0.4
CAPN3-215ENST00000565559 ALDH2P05091 517 aa12.58□□□□□ -0.4
CAPN3-215ENST00000565559 IGF2RP11717 2491 aa12.58□□□□□ -0.4
CAPN3-215ENST00000565559 DARSP14868 501 aaKnown RBP12.58□□□□□ -0.4
CAPN3-215ENST00000565559 TARSP26639 723 aaKnown RBP12.58□□□□□ -0.4
CAPN3-215ENST00000565559 GLUD2P49448 558 aa12.58□□□□□ -0.4
CAPN3-215ENST00000565559 CLCN3P51790 818 aa12.58□□□□□ -0.4
CAPN3-215ENST00000565559 ADCY1Q08828 1119 aa12.58□□□□□ -0.4
CAPN3-215ENST00000565559 C12orf50Q8NA57 414 aaPredicted RBP12.58□□□□□ -0.4
CAPN3-215ENST00000565559 MXRA8Q9BRK3 442 aa12.58□□□□□ -0.4
CAPN3-215ENST00000565559 PRKD2Q9BZL6 878 aa12.58□□□□□ -0.4
CAPN3-215ENST00000565559 TMEM134Q9H6X4 195 aa12.58□□□□□ -0.4
CAPN3-215ENST00000565559 FAN1Q9Y2M0 1017 aa12.58□□□□□ -0.4
CAPN3-215ENST00000565559 ZZEF1O43149 2961 aa12.57□□□□□ -0.4
CAPN3-215ENST00000565559 GAS2O43903 313 aaKnown RBP12.57□□□□□ -0.4
CAPN3-215ENST00000565559 C1RP00736 705 aa12.57□□□□□ -0.4
CAPN3-215ENST00000565559 SPATA31D3P0C874 917 aa12.57□□□□□ -0.4
CAPN3-215ENST00000565559 RAB27AP51159 221 aa12.57□□□□□ -0.4
CAPN3-215ENST00000565559 CCR3P51677 355 aa12.57□□□□□ -0.4
CAPN3-215ENST00000565559 ITGB3BPQ13352 177 aaPredicted RBP12.57□□□□□ -0.4
CAPN3-215ENST00000565559 LONRF3Q496Y0 759 aa12.57□□□□□ -0.4
CAPN3-215ENST00000565559 TWF2Q6IBS0 349 aaKnown RBP12.57□□□□□ -0.4
CAPN3-215ENST00000565559 SWSAP1Q6NVH7 229 aa12.57□□□□□ -0.4
CAPN3-215ENST00000565559 ABHD15Q6UXT9 468 aa12.57□□□□□ -0.4
CAPN3-215ENST00000565559 SPATA31D4Q6ZUB0 917 aa12.57□□□□□ -0.4
CAPN3-215ENST00000565559 CCDC60Q8IWA6 550 aaPredicted RBP12.57□□□□□ -0.4
CAPN3-215ENST00000565559 LPPQ93052 612 aa12.57□□□□□ -0.4
CAPN3-215ENST00000565559 PGBD4Q96DM1 585 aa12.57□□□□□ -0.4
CAPN3-215ENST00000565559 TMEM175Q9BSA9 504 aa12.57□□□□□ -0.4
CAPN3-215ENST00000565559 PHF20Q9BVI0 1012 aa12.57□□□□□ -0.4
CAPN3-215ENST00000565559 HERC2P3Q9BVR0 1158 aa12.57□□□□□ -0.4
CAPN3-215ENST00000565559 TRAIPQ9BWF2 469 aa12.57□□□□□ -0.4
CAPN3-215ENST00000565559 DIAPH3Q9NSV4 1193 aa12.57□□□□□ -0.4
CAPN3-215ENST00000565559 TSR3Q9UJK0 312 aaKnown RBP12.57□□□□□ -0.4
CAPN3-215ENST00000565559 PCDHA6Q9UN73 950 aa12.57□□□□□ -0.4
CAPN3-215ENST00000565559 PCDHA8Q9Y5H6 950 aa12.57□□□□□ -0.4
CAPN3-215ENST00000565559 DDX39AO00148 427 aaKnown RBP12.56□□□□□ -0.4
CAPN3-215ENST00000565559 OFD1O75665 1012 aa12.56□□□□□ -0.4
CAPN3-215ENST00000565559 PAPLNO95428 1278 aa12.56□□□□□ -0.4
CAPN3-215ENST00000565559 TDGF1P13385 188 aa12.56□□□□□ -0.4
CAPN3-215ENST00000565559 FGFR4P22455 802 aa12.56□□□□□ -0.4
CAPN3-215ENST00000565559 SFPQP23246 707 aaKnown RBP eCLIP12.56□□□□□ -0.4
CAPN3-215ENST00000565559 CNR2P34972 360 aa12.56□□□□□ -0.4
CAPN3-215ENST00000565559 TRDNQ13061 729 aa12.56□□□□□ -0.4
CAPN3-215ENST00000565559 SART3Q15020 963 aaKnown RBP12.56□□□□□ -0.4
CAPN3-215ENST00000565559 UBE2SQ16763 222 aa12.56□□□□□ -0.4
CAPN3-215ENST00000565559 BMP2KLQ5H9B9 411 aa12.56□□□□□ -0.4
CAPN3-215ENST00000565559 EFCAB12Q6NXP0 572 aa12.56□□□□□ -0.4
CAPN3-215ENST00000565559 TRMT1LQ7Z2T5 733 aaKnown RBP12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms