RNA–Protein interactions for RNA: ENST00000565224.5

SMG1-210, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5 BASIC

Gene SMG1, Length 2,372 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-210ENST00000565224 MDM1Q8TC05 714 aa7.82□□□□□ -1.16
SMG1-210ENST00000565224 MORC4Q8TE76 937 aa7.82□□□□□ -1.16
SMG1-210ENST00000565224 TMEM174Q8WUU8 243 aa7.82□□□□□ -1.16
SMG1-210ENST00000565224 RNF25Q96BH1 459 aaPredicted RBP7.82□□□□□ -1.16
SMG1-210ENST00000565224 CCDC114Q96M63 670 aa7.82□□□□□ -1.16
SMG1-210ENST00000565224 ACCSQ96QU6 501 aa7.82□□□□□ -1.16
SMG1-210ENST00000565224 CSRNP1Q96S65 589 aa7.82□□□□□ -1.16
SMG1-210ENST00000565224 OSBPL7Q9BZF2 842 aa7.82□□□□□ -1.16
SMG1-210ENST00000565224 RANBP17Q9H2T7 1088 aaKnown RBP7.82□□□□□ -1.16
SMG1-210ENST00000565224 YY1AP1Q9H869 796 aa7.82□□□□□ -1.16
SMG1-210ENST00000565224 CNOT7Q9UIV1 285 aaKnown RBP7.82□□□□□ -1.16
SMG1-210ENST00000565224 RPTORQ8N122 1335 aa7.82□□□□□ -1.16
SMG1-210ENST00000565224 COL2A1P02458 1487 aaPredicted RBP7.82□□□□□ -1.16
SMG1-210ENST00000565224 IPO5O00410 1097 aaKnown RBP7.82□□□□□ -1.16
SMG1-210ENST00000565224 CTNND1O60716 968 aaKnown RBP7.82□□□□□ -1.16
SMG1-210ENST00000565224 RTN2O75298 545 aa7.82□□□□□ -1.16
SMG1-210ENST00000565224 MTA2O94776 668 aa7.82□□□□□ -1.16
SMG1-210ENST00000565224 MAPTP10636 758 aaKnown RBP7.82□□□□□ -1.16
SMG1-210ENST00000565224 ALAS1P13196 640 aa7.82□□□□□ -1.16
SMG1-210ENST00000565224 CHN1P15882 459 aa7.82□□□□□ -1.16
SMG1-210ENST00000565224 COMTP21964 271 aa7.82□□□□□ -1.16
SMG1-210ENST00000565224 MMP13P45452 471 aa7.82□□□□□ -1.16
SMG1-210ENST00000565224 GCLMP48507 274 aa7.82□□□□□ -1.16
SMG1-210ENST00000565224 PEX5P50542 639 aa7.82□□□□□ -1.16
SMG1-210ENST00000565224 PPP3CAQ08209 521 aa7.82□□□□□ -1.16
SMG1-210ENST00000565224 LACTB2Q53H82 288 aaPredicted RBP7.82□□□□□ -1.16
SMG1-210ENST00000565224 TTC27Q6P3X3 843 aa7.82□□□□□ -1.16
SMG1-210ENST00000565224 C12orf56Q8IXR9 622 aa7.82□□□□□ -1.16
SMG1-210ENST00000565224 RUNDC3BQ96NL0 473 aa7.82□□□□□ -1.16
SMG1-210ENST00000565224 RIT2Q99578 217 aa7.82□□□□□ -1.16
SMG1-210ENST00000565224 SELENOSQ9BQE4 189 aa7.82□□□□□ -1.16
SMG1-210ENST00000565224 WNT8AQ9H1J5 351 aa7.82□□□□□ -1.16
SMG1-210ENST00000565224 PCIF1Q9H4Z3 704 aa7.82□□□□□ -1.16
SMG1-210ENST00000565224 AZI2Q9H6S1 392 aa7.82□□□□□ -1.16
SMG1-210ENST00000565224 XPO5Q9HAV4 1204 aaKnown RBP eCLIP7.82□□□□□ -1.16
SMG1-210ENST00000565224 SLC40A1Q9NP59 571 aa7.82□□□□□ -1.16
SMG1-210ENST00000565224 KLC4Q9NSK0 619 aa7.82□□□□□ -1.16
SMG1-210ENST00000565224 LARSQ9P2J5 1176 aaKnown RBP7.82□□□□□ -1.16
SMG1-210ENST00000565224 TMX2Q9Y320 296 aa7.82□□□□□ -1.16
SMG1-210ENST00000565224 RGS16O15492 202 aaPredicted RBP7.81□□□□□ -1.16
SMG1-210ENST00000565224 AGTP01019 485 aa7.81□□□□□ -1.16
SMG1-210ENST00000565224 MMEP08473 750 aa7.81□□□□□ -1.16
SMG1-210ENST00000565224 RPL21P46778 160 aaKnown RBP7.81□□□□□ -1.16
SMG1-210ENST00000565224 ADCY2Q08462 1091 aa7.81□□□□□ -1.16
SMG1-210ENST00000565224 SLC29A2Q14542 456 aa7.81□□□□□ -1.16
SMG1-210ENST00000565224 MESDQ14696 234 aa7.81□□□□□ -1.16
SMG1-210ENST00000565224 SLMAPQ14BN4 828 aa7.81□□□□□ -1.16
SMG1-210ENST00000565224 C6orf118Q5T5N4 469 aa7.81□□□□□ -1.16
SMG1-210ENST00000565224 CC2D2BQ6DHV5 1058 aa7.81□□□□□ -1.16
SMG1-210ENST00000565224 ZNF746Q6NUN9 644 aaPredicted RBP7.81□□□□□ -1.16
SMG1-210ENST00000565224 CCDC137Q6PK04 289 aaKnown RBP7.81□□□□□ -1.16
SMG1-210ENST00000565224 TAX1BP1Q86VP1 789 aa7.81□□□□□ -1.16
SMG1-210ENST00000565224 COL23A1Q86Y22 540 aaPredicted RBP7.81□□□□□ -1.16
SMG1-210ENST00000565224 XXYLT1Q8NBI6 393 aa7.81□□□□□ -1.16
SMG1-210ENST00000565224 ACER1Q8TDN7 264 aa7.81□□□□□ -1.16
SMG1-210ENST00000565224 CHURC1Q8WUH1 139 aa7.81□□□□□ -1.16
SMG1-210ENST00000565224 CD101Q93033 1021 aa7.81□□□□□ -1.16
SMG1-210ENST00000565224 ZNF622Q969S3 477 aaKnown RBP eCLIP7.81□□□□□ -1.16
SMG1-210ENST00000565224 PCDHB18PQ96TA0 734 aa7.81□□□□□ -1.16
SMG1-210ENST00000565224 CBWD1Q9BRT8 395 aa7.81□□□□□ -1.16
SMG1-210ENST00000565224 TMEM109Q9BVC6 243 aa7.81□□□□□ -1.16
SMG1-210ENST00000565224 STMN4Q9H169 189 aaPredicted RBP7.81□□□□□ -1.16
SMG1-210ENST00000565224 TAOK3Q9H2K8 898 aa7.81□□□□□ -1.16
SMG1-210ENST00000565224 A1CFQ9NQ94 594 aaKnown RBP7.81□□□□□ -1.16
SMG1-210ENST00000565224 HERC5Q9UII4 1024 aaKnown RBP7.81□□□□□ -1.16
SMG1-210ENST00000565224 MTUS1Q9ULD2 1270 aa7.81□□□□□ -1.16
SMG1-210ENST00000565224 BCS1LQ9Y276 419 aa7.81□□□□□ -1.16
SMG1-210ENST00000565224 PCDHA3Q9Y5H8 950 aa7.81□□□□□ -1.16
SMG1-210ENST00000565224 TLDC2A0PJX2 215 aa7.81□□□□□ -1.16
SMG1-210ENST00000565224 TISP43B9A030 160 aa7.81□□□□□ -1.16
SMG1-210ENST00000565224 DDX39AO00148 427 aaKnown RBP7.81□□□□□ -1.16
SMG1-210ENST00000565224 DNM1LO00429 736 aa7.81□□□□□ -1.16
SMG1-210ENST00000565224 MAPK13O15264 365 aa7.81□□□□□ -1.16
SMG1-210ENST00000565224 PMM2O15305 246 aa7.81□□□□□ -1.16
SMG1-210ENST00000565224 SGPL1O95470 568 aa7.81□□□□□ -1.16
SMG1-210ENST00000565224 GZMAP12544 262 aa7.81□□□□□ -1.16
SMG1-210ENST00000565224 PLS3P13797 630 aa7.81□□□□□ -1.16
SMG1-210ENST00000565224 CHRNB2P17787 502 aa7.81□□□□□ -1.16
SMG1-210ENST00000565224 SCTRP47872 440 aa7.81□□□□□ -1.16
SMG1-210ENST00000565224 MXI1P50539 228 aa7.81□□□□□ -1.16
SMG1-210ENST00000565224 CYP1B1Q16678 543 aa7.81□□□□□ -1.16
SMG1-210ENST00000565224 SPRED3Q2MJR0 410 aa7.81□□□□□ -1.16
SMG1-210ENST00000565224 C1orf220Q5T0J3 134 aa7.81□□□□□ -1.16
SMG1-210ENST00000565224 CYFIP1Q7L576 1253 aa7.81□□□□□ -1.16
SMG1-210ENST00000565224 MAEAQ7L5Y9 396 aa7.81□□□□□ -1.16
SMG1-210ENST00000565224 MIER3Q7Z3K6 550 aa7.81□□□□□ -1.16
SMG1-210ENST00000565224 CCDC91Q7Z6B0 441 aa7.81□□□□□ -1.16
SMG1-210ENST00000565224 NOP9Q86U38 636 aaKnown RBP7.81□□□□□ -1.16
SMG1-210ENST00000565224 SLC13A5Q86YT5 568 aaPredicted RBP7.81□□□□□ -1.16
SMG1-210ENST00000565224 FAM71AQ8IYT1 594 aa7.81□□□□□ -1.16
SMG1-210ENST00000565224 ZDHHC14Q8IZN3 488 aa7.81□□□□□ -1.16
SMG1-210ENST00000565224 CCDC197Q8NCU1 140 aa7.81□□□□□ -1.16
SMG1-210ENST00000565224 EPS8L1Q8TE68 723 aa7.81□□□□□ -1.16
SMG1-210ENST00000565224 ATXN2LQ8WWM7 1075 aaKnown RBP7.81□□□□□ -1.16
SMG1-210ENST00000565224 CCT6BQ92526 530 aa7.81□□□□□ -1.16
SMG1-210ENST00000565224 KAT5Q92993 513 aa7.81□□□□□ -1.16
SMG1-210ENST00000565224 ZNF317Q96PQ6 595 aaPredicted RBP7.81□□□□□ -1.16
SMG1-210ENST00000565224 MXRA8Q9BRK3 442 aa7.81□□□□□ -1.16
SMG1-210ENST00000565224 KDM4CQ9H3R0 1056 aa7.81□□□□□ -1.16
SMG1-210ENST00000565224 SEMA4AQ9H3S1 761 aa7.81□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms