RNA–Protein interactions for RNA: ENST00000564703.1

RAB40C-208, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB40C, Length 921 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-208ENST00000564703 SEMA6BQ9H3T3 888 aa17.55■□□□□ 0.4
RAB40C-208ENST00000564703 TBC1D7Q9P0N9 293 aa17.55■□□□□ 0.4
RAB40C-208ENST00000564703 TNFSF13BQ9Y275 285 aa17.55■□□□□ 0.4
RAB40C-208ENST00000564703 PCDHB13Q9Y5F0 798 aa17.55■□□□□ 0.4
RAB40C-208ENST00000564703 PVALEFA0A1B0GWK0 134 aa17.54■□□□□ 0.4
RAB40C-208ENST00000564703 ACTN4O43707 911 aaKnown RBP17.54■□□□□ 0.4
RAB40C-208ENST00000564703 MYL1P05976 194 aa17.54■□□□□ 0.4
RAB40C-208ENST00000564703 FGFR1P11362 822 aa17.54■□□□□ 0.4
RAB40C-208ENST00000564703 NMT1P30419 496 aaKnown RBP17.54■□□□□ 0.4
RAB40C-208ENST00000564703 MATR3P43243 847 aaKnown RBP eCLIP17.54■□□□□ 0.4
RAB40C-208ENST00000564703 PAN2Q504Q3 1202 aaKnown RBP17.54■□□□□ 0.4
RAB40C-208ENST00000564703 UBXN11Q5T124 520 aa17.54■□□□□ 0.4
RAB40C-208ENST00000564703 NT5DC1Q5TFE4 455 aa17.54■□□□□ 0.4
RAB40C-208ENST00000564703 CNNM4Q6P4Q7 775 aa17.54■□□□□ 0.4
RAB40C-208ENST00000564703 GLB1LQ6UWU2 654 aa17.54■□□□□ 0.4
RAB40C-208ENST00000564703 ZNF720Q7Z2F6 126 aa17.54■□□□□ 0.4
RAB40C-208ENST00000564703 ZNF598Q86UK7 904 aaKnown RBP17.54■□□□□ 0.4
RAB40C-208ENST00000564703 DEFB123Q8N688 67 aa17.54■□□□□ 0.4
RAB40C-208ENST00000564703 TGS1Q96RS0 853 aaKnown RBP17.54■□□□□ 0.4
RAB40C-208ENST00000564703 ACO2Q99798 780 aaKnown RBP17.54■□□□□ 0.4
RAB40C-208ENST00000564703 TARS2Q9BW92 718 aaKnown RBP17.54■□□□□ 0.4
RAB40C-208ENST00000564703 EIF2AQ9BY44 585 aaKnown RBP17.54■□□□□ 0.4
RAB40C-208ENST00000564703 BLZF1Q9H2G9 400 aa17.54■□□□□ 0.4
RAB40C-208ENST00000564703 PARP2Q9UGN5 583 aa17.54■□□□□ 0.4
RAB40C-208ENST00000564703 TBX20Q9UMR3 447 aa17.54■□□□□ 0.4
RAB40C-208ENST00000564703 EXOC7Q9UPT5 735 aa17.54■□□□□ 0.4
RAB40C-208ENST00000564703 USP20Q9Y2K6 914 aa17.54■□□□□ 0.4
RAB40C-208ENST00000564703 RWDD3Q9Y3V2 267 aa17.54■□□□□ 0.4
RAB40C-208ENST00000564703 LCHNA4D1U4 455 aa17.53■□□□□ 0.4
RAB40C-208ENST00000564703 LINC01553A4QN01 128 aa17.53■□□□□ 0.4
RAB40C-208ENST00000564703 GCNT3O95395 438 aa17.53■□□□□ 0.4
RAB40C-208ENST00000564703 LIG4P49917 911 aa17.53■□□□□ 0.4
RAB40C-208ENST00000564703 GTF2BQ00403 316 aa17.53■□□□□ 0.4
RAB40C-208ENST00000564703 TAP1Q03518 808 aa17.53■□□□□ 0.4
RAB40C-208ENST00000564703 ALCAMQ13740 583 aa17.53■□□□□ 0.4
RAB40C-208ENST00000564703 DCAF4L1Q3SXM0 396 aa17.53■□□□□ 0.4
RAB40C-208ENST00000564703 ZPBP2Q6X784 338 aa17.53■□□□□ 0.4
RAB40C-208ENST00000564703 KRBA2Q6ZNG9 492 aa17.53■□□□□ 0.4
RAB40C-208ENST00000564703 UNC13DQ70J99 1090 aa17.53■□□□□ 0.4
RAB40C-208ENST00000564703 URGCPQ8TCY9 931 aa17.53■□□□□ 0.4
RAB40C-208ENST00000564703 SP7Q8TDD2 431 aaPredicted RBP17.53■□□□□ 0.4
RAB40C-208ENST00000564703 HELQQ8TDG4 1101 aa17.53■□□□□ 0.4
RAB40C-208ENST00000564703 LPPQ93052 612 aa17.53■□□□□ 0.4
RAB40C-208ENST00000564703 FAM161BQ96MY7 647 aa17.53■□□□□ 0.4
RAB40C-208ENST00000564703 SAMD11Q96NU1 681 aa17.53■□□□□ 0.4
RAB40C-208ENST00000564703 APOL6Q9BWW8 343 aa17.53■□□□□ 0.4
RAB40C-208ENST00000564703 GOLPH3LQ9H4A5 285 aa17.53■□□□□ 0.4
RAB40C-208ENST00000564703 ST6GALNAC4Q9H4F1 302 aa17.53■□□□□ 0.4
RAB40C-208ENST00000564703 PDZD7Q9H5P4 517 aa17.53■□□□□ 0.4
RAB40C-208ENST00000564703 AAASQ9NRG9 546 aa17.53■□□□□ 0.4
RAB40C-208ENST00000564703 OLFML3Q9NRN5 406 aa17.53■□□□□ 0.4
RAB40C-208ENST00000564703 KANSL3Q9P2N6 904 aa17.53■□□□□ 0.4
RAB40C-208ENST00000564703 HOOK1Q9UJC3 728 aaKnown RBP17.53■□□□□ 0.4
RAB40C-208ENST00000564703 IPPQ9Y573 584 aa17.53■□□□□ 0.4
RAB40C-208ENST00000564703 MYO9BQ13459 2157 aa17.53■□□□□ 0.4
RAB40C-208ENST00000564703 GBF1Q92538 1859 aa17.52■□□□□ 0.4
RAB40C-208ENST00000564703 TTLL13PA6NNM8 815 aa17.52■□□□□ 0.4
RAB40C-208ENST00000564703 CLDN3O15551 220 aa17.52■□□□□ 0.4
RAB40C-208ENST00000564703 GTPBP6O43824 516 aaPredicted RBP17.52■□□□□ 0.4
RAB40C-208ENST00000564703 PRPF40AO75400 957 aaKnown RBP17.52■□□□□ 0.4
RAB40C-208ENST00000564703 TOM1L1O75674 476 aa17.52■□□□□ 0.4
RAB40C-208ENST00000564703 RNASELQ05823 741 aaKnown RBP17.52■□□□□ 0.4
RAB40C-208ENST00000564703 FAM160A1Q05DH4 1040 aa17.52■□□□□ 0.4
RAB40C-208ENST00000564703 COASYQ13057 564 aa17.52■□□□□ 0.4
RAB40C-208ENST00000564703 CUL4BQ13620 913 aa17.52■□□□□ 0.4
RAB40C-208ENST00000564703 ZC2HC1CQ53FD0 456 aaPredicted RBP17.52■□□□□ 0.4
RAB40C-208ENST00000564703 TAS1R3Q7RTX0 852 aa17.52■□□□□ 0.4
RAB40C-208ENST00000564703 ZBTB33Q86T24 672 aa17.52■□□□□ 0.4
RAB40C-208ENST00000564703 GRAMD1CQ8IYS0 662 aa17.52■□□□□ 0.4
RAB40C-208ENST00000564703 SYCP3Q8IZU3 236 aa17.52■□□□□ 0.4
RAB40C-208ENST00000564703 HVCN1Q96D96 273 aa17.52■□□□□ 0.4
RAB40C-208ENST00000564703 CASD1Q96PB1 797 aa17.52■□□□□ 0.4
RAB40C-208ENST00000564703 GBP4Q96PP9 640 aa17.52■□□□□ 0.4
RAB40C-208ENST00000564703 ACCSQ96QU6 501 aa17.52■□□□□ 0.4
RAB40C-208ENST00000564703 MRPL9Q9BYD2 267 aaKnown RBP17.52■□□□□ 0.4
RAB40C-208ENST00000564703 CERS4Q9HA82 394 aa17.52■□□□□ 0.4
RAB40C-208ENST00000564703 RSAD1Q9HA92 442 aa17.52■□□□□ 0.4
RAB40C-208ENST00000564703 INPP5FQ9Y2H2 1132 aa17.52■□□□□ 0.4
RAB40C-208ENST00000564703 PTPRSQ13332 1948 aa17.52■□□□□ 0.4
RAB40C-208ENST00000564703 FRMD3A2A2Y4 597 aa17.51■□□□□ 0.39
RAB40C-208ENST00000564703 HNRNPDLO14979 420 aaKnown RBP17.51■□□□□ 0.39
RAB40C-208ENST00000564703 ATF7P17544 494 aaPredicted RBP17.51■□□□□ 0.39
RAB40C-208ENST00000564703 RANBP2P49792 3224 aaKnown RBP17.51■□□□□ 0.39
RAB40C-208ENST00000564703 GATMP50440 423 aa17.51■□□□□ 0.39
RAB40C-208ENST00000564703 ERVK-21P61565 698 aa17.51■□□□□ 0.39
RAB40C-208ENST00000564703 ZNF568Q3ZCX4 644 aa17.51■□□□□ 0.39
RAB40C-208ENST00000564703 NOMO2Q5JPE7 1267 aa17.51■□□□□ 0.39
RAB40C-208ENST00000564703 EEF1DP3Q658K8 133 aa17.51■□□□□ 0.39
RAB40C-208ENST00000564703 SLFN12LQ6IEE8 588 aa17.51■□□□□ 0.39
RAB40C-208ENST00000564703 MPZL3Q6UWV2 235 aa17.51■□□□□ 0.39
RAB40C-208ENST00000564703 FMR1NBQ8N0W7 255 aaPredicted RBP17.51■□□□□ 0.39
RAB40C-208ENST00000564703 SMG8Q8ND04 991 aaKnown RBP17.51■□□□□ 0.39
RAB40C-208ENST00000564703 ARNTL2Q8WYA1 636 aa17.51■□□□□ 0.39
RAB40C-208ENST00000564703 KCNN1Q92952 543 aa17.51■□□□□ 0.39
RAB40C-208ENST00000564703 FAM193BQ96PV7 902 aaPredicted RBP17.51■□□□□ 0.39
RAB40C-208ENST00000564703 CCDC94Q9BW85 323 aaPredicted RBP17.51■□□□□ 0.39
RAB40C-208ENST00000564703 TYW1Q9NV66 732 aaKnown RBP17.51■□□□□ 0.39
RAB40C-208ENST00000564703 MTUS1Q9ULD2 1270 aa17.51■□□□□ 0.39
RAB40C-208ENST00000564703 GIT1Q9Y2X7 761 aa17.51■□□□□ 0.39
RAB40C-208ENST00000564703 HES2Q9Y543 173 aa17.51■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms