RNA–Protein interactions for RNA: ENST00000564678.1

HERPUD1-209, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 1 (best)

Gene HERPUD1, Length 2,199 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-209ENST00000564678 MAPK7Q13164 816 aa7.9□□□□□ -1.15
HERPUD1-209ENST00000564678 RAPGEF1Q13905 1077 aa7.9□□□□□ -1.15
HERPUD1-209ENST00000564678 NAB2Q15742 525 aa7.9□□□□□ -1.15
HERPUD1-209ENST00000564678 TBC1D10BQ4KMP7 808 aaPredicted RBP7.9□□□□□ -1.15
HERPUD1-209ENST00000564678 MUM1L1Q5H9M0 696 aa7.9□□□□□ -1.15
HERPUD1-209ENST00000564678 TCERG1LQ5VWI1 586 aa7.9□□□□□ -1.15
HERPUD1-209ENST00000564678 CNPY4Q8N129 248 aa7.9□□□□□ -1.15
HERPUD1-209ENST00000564678 RUBCNQ92622 972 aa7.9□□□□□ -1.15
HERPUD1-209ENST00000564678 GPRASP2Q96D09 838 aa7.9□□□□□ -1.15
HERPUD1-209ENST00000564678 SLC39A13Q96H72 371 aa7.9□□□□□ -1.15
HERPUD1-209ENST00000564678 C8orf48Q96LL4 319 aa7.9□□□□□ -1.15
HERPUD1-209ENST00000564678 RMDN3Q96TC7 470 aa7.9□□□□□ -1.15
HERPUD1-209ENST00000564678 MPHOSPH6Q99547 160 aaKnown RBP7.9□□□□□ -1.15
HERPUD1-209ENST00000564678 SENP7Q9BQF6 1050 aa7.9□□□□□ -1.15
HERPUD1-209ENST00000564678 EPC1Q9H2F5 836 aa7.9□□□□□ -1.15
HERPUD1-209ENST00000564678 PXMP2Q9NR77 195 aa7.9□□□□□ -1.15
HERPUD1-209ENST00000564678 PICK1Q9NRD5 415 aa7.9□□□□□ -1.15
HERPUD1-209ENST00000564678 AGPAT3Q9NRZ7 376 aa7.9□□□□□ -1.15
HERPUD1-209ENST00000564678 ANKEF1Q9NU02 776 aa7.9□□□□□ -1.15
HERPUD1-209ENST00000564678 TCEAL9Q9UHQ7 104 aa7.9□□□□□ -1.15
HERPUD1-209ENST00000564678 TFR2Q9UP52 801 aa7.9□□□□□ -1.15
HERPUD1-209ENST00000564678 ZMYM2Q9UBW7 1377 aa7.89□□□□□ -1.15
HERPUD1-209ENST00000564678 MYPNQ86TC9 1320 aa7.89□□□□□ -1.15
HERPUD1-209ENST00000564678 WDR64B1ANS9 1081 aa7.89□□□□□ -1.15
HERPUD1-209ENST00000564678 MAP2K7O14733 419 aa7.89□□□□□ -1.15
HERPUD1-209ENST00000564678 P4HA2O15460 535 aa7.89□□□□□ -1.15
HERPUD1-209ENST00000564678 STAM2O75886 525 aa7.89□□□□□ -1.15
HERPUD1-209ENST00000564678 TBC1D8O95759 1140 aa7.89□□□□□ -1.15
HERPUD1-209ENST00000564678 CCDC172P0C7W6 258 aa7.89□□□□□ -1.15
HERPUD1-209ENST00000564678 PLS3P13797 630 aa7.89□□□□□ -1.15
HERPUD1-209ENST00000564678 PSMC5P62195 406 aa7.89□□□□□ -1.15
HERPUD1-209ENST00000564678 RASSF7Q02833 373 aa7.89□□□□□ -1.15
HERPUD1-209ENST00000564678 ITGB3BPQ13352 177 aaPredicted RBP7.89□□□□□ -1.15
HERPUD1-209ENST00000564678 COG2Q14746 738 aa7.89□□□□□ -1.15
HERPUD1-209ENST00000564678 IFI16Q16666 785 aaKnown RBP7.89□□□□□ -1.15
HERPUD1-209ENST00000564678 LONRF2Q1L5Z9 754 aa7.89□□□□□ -1.15
HERPUD1-209ENST00000564678 ZC2HC1CQ53FD0 456 aaPredicted RBP7.89□□□□□ -1.15
HERPUD1-209ENST00000564678 DCAF17Q5H9S7 520 aaPredicted RBP7.89□□□□□ -1.15
HERPUD1-209ENST00000564678 ARHGEF16Q5VV41 709 aa7.89□□□□□ -1.15
HERPUD1-209ENST00000564678 SLC30A10Q6XR72 485 aa7.89□□□□□ -1.15
HERPUD1-209ENST00000564678 VPS36Q86VN1 386 aa7.89□□□□□ -1.15
HERPUD1-209ENST00000564678 VSIG10LQ86VR7 867 aa7.89□□□□□ -1.15
HERPUD1-209ENST00000564678 DAW1Q8N136 415 aa7.89□□□□□ -1.15
HERPUD1-209ENST00000564678 FAM133AQ8N9E0 248 aa7.89□□□□□ -1.15
HERPUD1-209ENST00000564678 IL31RAQ8NI17 732 aa7.89□□□□□ -1.15
HERPUD1-209ENST00000564678 DMRTB1Q96MA1 342 aa7.89□□□□□ -1.15
HERPUD1-209ENST00000564678 FUT8Q9BYC5 575 aa7.89□□□□□ -1.15
HERPUD1-209ENST00000564678 HDAC6Q9UBN7 1215 aa7.89□□□□□ -1.15
HERPUD1-209ENST00000564678 DOLKQ9UPQ8 538 aa7.89□□□□□ -1.15
HERPUD1-209ENST00000564678 HYOU1Q9Y4L1 999 aa7.89□□□□□ -1.15
HERPUD1-209ENST00000564678 GJA3Q9Y6H8 435 aa7.89□□□□□ -1.15
HERPUD1-209ENST00000564678 DOCK1Q14185 1865 aa7.89□□□□□ -1.15
HERPUD1-209ENST00000564678 UTRNP46939 3433 aa7.89□□□□□ -1.15
HERPUD1-209ENST00000564678 ESYT3A0FGR9 886 aa7.88□□□□□ -1.15
HERPUD1-209ENST00000564678 FERP16591 822 aa7.88□□□□□ -1.15
HERPUD1-209ENST00000564678 CCND2P30279 289 aa7.88□□□□□ -1.15
HERPUD1-209ENST00000564678 YWHABP31946 246 aaKnown RBP7.88□□□□□ -1.15
HERPUD1-209ENST00000564678 ETFBP38117 255 aa7.88□□□□□ -1.15
HERPUD1-209ENST00000564678 GNALP38405 381 aa7.88□□□□□ -1.15
HERPUD1-209ENST00000564678 FMO5P49326 533 aa7.88□□□□□ -1.15
HERPUD1-209ENST00000564678 CDKN1CP49918 316 aaPredicted RBP7.88□□□□□ -1.15
HERPUD1-209ENST00000564678 JAM2P57087 298 aa7.88□□□□□ -1.15
HERPUD1-209ENST00000564678 BEND6Q5SZJ8 279 aaPredicted RBP7.88□□□□□ -1.15
HERPUD1-209ENST00000564678 CCDC70Q6NSX1 233 aa7.88□□□□□ -1.15
HERPUD1-209ENST00000564678 INTS8Q75QN2 995 aaKnown RBP7.88□□□□□ -1.15
HERPUD1-209ENST00000564678 HDXQ7Z353 690 aa7.88□□□□□ -1.15
HERPUD1-209ENST00000564678 NLRX1Q86UT6 975 aa7.88□□□□□ -1.15
HERPUD1-209ENST00000564678 JAMLQ86YT9 394 aa7.88□□□□□ -1.15
HERPUD1-209ENST00000564678 CREG2Q8IUH2 290 aa7.88□□□□□ -1.15
HERPUD1-209ENST00000564678 SYCP3Q8IZU3 236 aa7.88□□□□□ -1.15
HERPUD1-209ENST00000564678 REPS2Q8NFH8 660 aa7.88□□□□□ -1.15
HERPUD1-209ENST00000564678 CDHR1Q96JP9 859 aa7.88□□□□□ -1.15
HERPUD1-209ENST00000564678 ACCSQ96QU6 501 aa7.88□□□□□ -1.15
HERPUD1-209ENST00000564678 MMS19Q96T76 1030 aa7.88□□□□□ -1.15
HERPUD1-209ENST00000564678 UBXN6Q9BZV1 441 aa7.88□□□□□ -1.15
HERPUD1-209ENST00000564678 BCAS3Q9H6U6 928 aa7.88□□□□□ -1.15
HERPUD1-209ENST00000564678 C17orf75Q9HAS0 396 aa7.88□□□□□ -1.15
HERPUD1-209ENST00000564678 HOXC10Q9NYD6 342 aa7.88□□□□□ -1.15
HERPUD1-209ENST00000564678 GCNT4Q9P109 453 aa7.88□□□□□ -1.15
HERPUD1-209ENST00000564678 ADAMTS1Q9UHI8 967 aa7.88□□□□□ -1.15
HERPUD1-209ENST00000564678 INTUQ9ULD6 942 aa7.88□□□□□ -1.15
HERPUD1-209ENST00000564678 L1RE1Q9UN81 338 aa7.88□□□□□ -1.15
HERPUD1-209ENST00000564678 SAMM50Q9Y512 469 aa7.88□□□□□ -1.15
HERPUD1-209ENST00000564678 CAPN6Q9Y6Q1 641 aa7.88□□□□□ -1.15
HERPUD1-209ENST00000564678 PARP14Q460N5 1801 aa7.88□□□□□ -1.15
HERPUD1-209ENST00000564678 A0A087X0T9 212 aa7.88□□□□□ -1.15
HERPUD1-209ENST00000564678 DDX39AO00148 427 aaKnown RBP7.88□□□□□ -1.15
HERPUD1-209ENST00000564678 PMM2O15305 246 aa7.88□□□□□ -1.15
HERPUD1-209ENST00000564678 SRGAP2O75044 1071 aa7.88□□□□□ -1.15
HERPUD1-209ENST00000564678 N4BP1O75113 896 aaKnown RBP7.88□□□□□ -1.15
HERPUD1-209ENST00000564678 MOCS3O95396 460 aa7.88□□□□□ -1.15
HERPUD1-209ENST00000564678 F12P00748 615 aaPredicted RBP7.88□□□□□ -1.15
HERPUD1-209ENST00000564678 FAM228BP0C875 321 aa7.88□□□□□ -1.15
HERPUD1-209ENST00000564678 ACTN1P12814 892 aa7.88□□□□□ -1.15
HERPUD1-209ENST00000564678 EIF2AK2P19525 551 aaKnown RBP7.88□□□□□ -1.15
HERPUD1-209ENST00000564678 STAT1P42224 750 aa7.88□□□□□ -1.15
HERPUD1-209ENST00000564678 PAFAH1B1P43034 410 aa7.88□□□□□ -1.15
HERPUD1-209ENST00000564678 PLA2G4AP47712 749 aa7.88□□□□□ -1.15
HERPUD1-209ENST00000564678 ATN1P54259 1190 aaPredicted RBP7.88□□□□□ -1.15
HERPUD1-209ENST00000564678 GTF2BQ00403 316 aa7.88□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 65.8 ms