RNA–Protein interactions for RNA: ENST00000564540.5

UBR1-205, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 3

Gene UBR1, Length 735 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-205ENST00000564540 LILRA3Q8N6C8 439 aaPredicted RBP6.7□□□□□ -1.34
UBR1-205ENST00000564540 MDGA1Q8NFP4 955 aa6.7□□□□□ -1.34
UBR1-205ENST00000564540 ATL2Q8NHH9 583 aa6.7□□□□□ -1.34
UBR1-205ENST00000564540 TSPEARQ8WU66 669 aa6.7□□□□□ -1.34
UBR1-205ENST00000564540 ST8SIA2Q92186 375 aa6.7□□□□□ -1.34
UBR1-205ENST00000564540 IL17RAQ96F46 866 aa6.7□□□□□ -1.34
UBR1-205ENST00000564540 AURKAIP1Q9NWT8 199 aaPredicted RBP6.7□□□□□ -1.34
UBR1-205ENST00000564540 SRRDQ9UH36 339 aa6.7□□□□□ -1.34
UBR1-205ENST00000564540 FZD7O75084 574 aa6.69□□□□□ -1.34
UBR1-205ENST00000564540 IPO13O94829 963 aaKnown RBP6.69□□□□□ -1.34
UBR1-205ENST00000564540 HK1P19367 917 aa6.69□□□□□ -1.34
UBR1-205ENST00000564540 WNT3AP56704 352 aa6.69□□□□□ -1.34
UBR1-205ENST00000564540 MEF2AQ02078 507 aaPredicted RBP6.69□□□□□ -1.34
UBR1-205ENST00000564540 MRPL49Q13405 166 aaKnown RBP6.69□□□□□ -1.34
UBR1-205ENST00000564540 LSM12Q3MHD2 195 aaKnown RBP6.69□□□□□ -1.34
UBR1-205ENST00000564540 SPATS2Q86XZ4 545 aaKnown RBP6.69□□□□□ -1.34
UBR1-205ENST00000564540 SNX33Q8WV41 574 aa6.69□□□□□ -1.34
UBR1-205ENST00000564540 AHCYL2Q96HN2 611 aaKnown RBP6.69□□□□□ -1.34
UBR1-205ENST00000564540 RAX2Q96IS3 184 aa6.69□□□□□ -1.34
UBR1-205ENST00000564540 SORCS2Q96PQ0 1159 aa6.69□□□□□ -1.34
UBR1-205ENST00000564540 ORAI2Q96SN7 254 aa6.69□□□□□ -1.34
UBR1-205ENST00000564540 MNTQ99583 582 aa6.69□□□□□ -1.34
UBR1-205ENST00000564540 ZNF703Q9H7S9 590 aaPredicted RBP6.69□□□□□ -1.34
UBR1-205ENST00000564540 GYPEP15421 78 aa6.68□□□□□ -1.34
UBR1-205ENST00000564540 ACVRL1P37023 503 aa6.68□□□□□ -1.34
UBR1-205ENST00000564540 GDF5P43026 501 aa6.68□□□□□ -1.34
UBR1-205ENST00000564540 GZMKP49863 264 aa6.68□□□□□ -1.34
UBR1-205ENST00000564540 MRPS9P82933 396 aaKnown RBP6.68□□□□□ -1.34
UBR1-205ENST00000564540 SRSF2Q01130 221 aaKnown RBP6.68□□□□□ -1.34
UBR1-205ENST00000564540 TOR2AQ5JU69 321 aa6.68□□□□□ -1.34
UBR1-205ENST00000564540 KCNK18Q7Z418 384 aa6.68□□□□□ -1.34
UBR1-205ENST00000564540 APBB1IPQ7Z5R6 666 aaPredicted RBP6.68□□□□□ -1.34
UBR1-205ENST00000564540 XYLT1Q86Y38 959 aa6.68□□□□□ -1.34
UBR1-205ENST00000564540 ZFPM1Q8IX07 1006 aa6.68□□□□□ -1.34
UBR1-205ENST00000564540 GLB1L3Q8NCI6 653 aaPredicted RBP6.68□□□□□ -1.34
UBR1-205ENST00000564540 CPPED1Q9BRF8 314 aaPredicted RBP6.68□□□□□ -1.34
UBR1-205ENST00000564540 LSM14BQ9BX40 385 aaKnown RBP6.68□□□□□ -1.34
UBR1-205ENST00000564540 CPEB1Q9BZB8 566 aaKnown RBP6.68□□□□□ -1.34
UBR1-205ENST00000564540 SPC25Q9HBM1 224 aa6.68□□□□□ -1.34
UBR1-205ENST00000564540 WDR3Q9UNX4 943 aaKnown RBP eCLIP6.68□□□□□ -1.34
UBR1-205ENST00000564540 XDHP47989 1333 aa6.68□□□□□ -1.34
UBR1-205ENST00000564540 ZMYM3Q14202 1370 aa6.68□□□□□ -1.34
UBR1-205ENST00000564540 SBNO2Q9Y2G9 1366 aa6.68□□□□□ -1.34
UBR1-205ENST00000564540 NARSO43776 548 aaKnown RBP6.67□□□□□ -1.34
UBR1-205ENST00000564540 DNAJC6O75061 913 aa6.67□□□□□ -1.34
UBR1-205ENST00000564540 ITGA10O75578 1167 aa6.67□□□□□ -1.34
UBR1-205ENST00000564540 GPR3P46089 330 aa6.67□□□□□ -1.34
UBR1-205ENST00000564540 SLC25A3Q00325 362 aa6.67□□□□□ -1.34
UBR1-205ENST00000564540 TOB2Q14106 344 aaPredicted RBP6.67□□□□□ -1.34
UBR1-205ENST00000564540 MUM1Q2TAK8 710 aa6.67□□□□□ -1.34
UBR1-205ENST00000564540 C19orf54Q5BKX5 351 aa6.67□□□□□ -1.34
UBR1-205ENST00000564540 FNDC7Q5VTL7 733 aa6.67□□□□□ -1.34
UBR1-205ENST00000564540 RNF219Q5W0B1 726 aaPredicted RBP6.67□□□□□ -1.34
UBR1-205ENST00000564540 HTR3DQ70Z44 454 aa6.67□□□□□ -1.34
UBR1-205ENST00000564540 DDX42Q86XP3 938 aaKnown RBP eCLIP6.67□□□□□ -1.34
UBR1-205ENST00000564540 AUTS2Q8WXX7 1259 aa6.67□□□□□ -1.34
UBR1-205ENST00000564540 PARPBPQ9NWS1 579 aa6.67□□□□□ -1.34
UBR1-205ENST00000564540 ADCY6O43306 1168 aa6.66□□□□□ -1.34
UBR1-205ENST00000564540 FAM20BO75063 409 aa6.66□□□□□ -1.34
UBR1-205ENST00000564540 ZNF202O95125 648 aa6.66□□□□□ -1.34
UBR1-205ENST00000564540 PTTG1IPP53801 180 aa6.66□□□□□ -1.34
UBR1-205ENST00000564540 ERVK-21P61565 698 aa6.66□□□□□ -1.34
UBR1-205ENST00000564540 APBA1Q02410 837 aa6.66□□□□□ -1.34
UBR1-205ENST00000564540 TUBA3CQ13748 450 aa6.66□□□□□ -1.34
UBR1-205ENST00000564540 TUBA3EQ6PEY2 450 aa6.66□□□□□ -1.34
UBR1-205ENST00000564540 ZNF662Q6ZS27 426 aa6.66□□□□□ -1.34
UBR1-205ENST00000564540 OR52N2Q8NGI0 321 aa6.66□□□□□ -1.34
UBR1-205ENST00000564540 MDM1Q8TC05 714 aa6.66□□□□□ -1.34
UBR1-205ENST00000564540 RIN2Q8WYP3 895 aaPredicted RBP6.66□□□□□ -1.34
UBR1-205ENST00000564540 CDC5LQ99459 802 aaKnown RBP6.66□□□□□ -1.34
UBR1-205ENST00000564540 IFT122Q9HBG6 1241 aa6.66□□□□□ -1.34
UBR1-205ENST00000564540 SLC2A4RGQ9NR83 387 aa6.66□□□□□ -1.34
UBR1-205ENST00000564540 CCM2LQ9NUG4 571 aaPredicted RBP6.66□□□□□ -1.34
UBR1-205ENST00000564540 DNAJC28Q9NX36 388 aa6.66□□□□□ -1.34
UBR1-205ENST00000564540 GPRC5DQ9NZD1 345 aa6.66□□□□□ -1.34
UBR1-205ENST00000564540 RPTORQ8N122 1335 aa6.66□□□□□ -1.34
UBR1-205ENST00000564540 PHLDB1Q86UU1 1377 aa6.66□□□□□ -1.34
UBR1-205ENST00000564540 GOLGA6L6A8MZA4 724 aa6.65□□□□□ -1.34
UBR1-205ENST00000564540 SLPIP03973 132 aa6.65□□□□□ -1.34
UBR1-205ENST00000564540 OSMP13725 252 aa6.65□□□□□ -1.34
UBR1-205ENST00000564540 ADSLP30566 484 aaPredicted RBP6.65□□□□□ -1.34
UBR1-205ENST00000564540 FAPQ12884 760 aa6.65□□□□□ -1.34
UBR1-205ENST00000564540 KLF10Q13118 480 aa6.65□□□□□ -1.34
UBR1-205ENST00000564540 ADRM1Q16186 407 aa6.65□□□□□ -1.34
UBR1-205ENST00000564540 BTNL9Q6UXG8 535 aa6.65□□□□□ -1.34
UBR1-205ENST00000564540 FAM83AQ86UY5 434 aa6.65□□□□□ -1.34
UBR1-205ENST00000564540 ZNF480Q8WV37 535 aa6.65□□□□□ -1.34
UBR1-205ENST00000564540 TRIM8Q9BZR9 551 aa6.65□□□□□ -1.34
UBR1-205ENST00000564540 DMRT3Q9NQL9 472 aa6.65□□□□□ -1.34
UBR1-205ENST00000564540 MCM8Q9UJA3 840 aa6.65□□□□□ -1.34
UBR1-205ENST00000564540 ING1Q9UK53 422 aaPredicted RBP6.65□□□□□ -1.34
UBR1-205ENST00000564540 CADPSQ9ULU8 1353 aa6.65□□□□□ -1.35
UBR1-205ENST00000564540 GRXCR1A8MXD5 290 aa6.64□□□□□ -1.35
UBR1-205ENST00000564540 AKR1B10O60218 316 aa6.64□□□□□ -1.35
UBR1-205ENST00000564540 CSRP2Q16527 193 aa6.64□□□□□ -1.35
UBR1-205ENST00000564540 MST1LQ2TV78 715 aa6.64□□□□□ -1.35
UBR1-205ENST00000564540 DCAF17Q5H9S7 520 aaPredicted RBP6.64□□□□□ -1.35
UBR1-205ENST00000564540 RABL3Q5HYI8 236 aa6.64□□□□□ -1.35
UBR1-205ENST00000564540 PRAMEF14Q5SWL7 426 aa6.64□□□□□ -1.35
UBR1-205ENST00000564540 ANKS6Q68DC2 871 aa6.64□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms