RNA–Protein interactions for RNA: ENST00000564468.5

CLK3-216, Transcript of CDC like kinase 3, humanhuman

TSL 3

Gene CLK3, Length 929 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-216ENST00000564468 FGF18O76093 207 aa14.77□□□□□ -0.05
CLK3-216ENST00000564468 MARCKSP29966 332 aaPredicted RBP14.77□□□□□ -0.05
CLK3-216ENST00000564468 SMTNP53814 917 aa14.77□□□□□ -0.05
CLK3-216ENST00000564468 SLC12A3P55017 1021 aa14.77□□□□□ -0.05
CLK3-216ENST00000564468 PEX3P56589 373 aa14.77□□□□□ -0.05
CLK3-216ENST00000564468 PLCB3Q01970 1234 aa14.77□□□□□ -0.05
CLK3-216ENST00000564468 CEBPZQ03701 1054 aaKnown RBP14.77□□□□□ -0.05
CLK3-216ENST00000564468 STK38Q15208 465 aa14.77□□□□□ -0.05
CLK3-216ENST00000564468 FAM173BQ6P4H8 233 aa14.77□□□□□ -0.05
CLK3-216ENST00000564468 LRRC55Q6ZSA7 311 aa14.77□□□□□ -0.05
CLK3-216ENST00000564468 BSNDQ8WZ55 320 aa14.77□□□□□ -0.05
CLK3-216ENST00000564468 FAM193BQ96PV7 902 aaPredicted RBP14.77□□□□□ -0.05
CLK3-216ENST00000564468 USP28Q96RU2 1077 aa14.77□□□□□ -0.05
CLK3-216ENST00000564468 RUSC1Q9BVN2 902 aa14.77□□□□□ -0.05
CLK3-216ENST00000564468 SPG21Q9NZD8 308 aa14.77□□□□□ -0.05
CLK3-216ENST00000564468 INPP5FQ9Y2H2 1132 aa14.77□□□□□ -0.05
CLK3-216ENST00000564468 GIT1Q9Y2X7 761 aa14.77□□□□□ -0.05
CLK3-216ENST00000564468 IPPQ9Y573 584 aa14.77□□□□□ -0.05
CLK3-216ENST00000564468 TCF20Q9UGU0 1960 aaKnown RBP14.76□□□□□ -0.05
CLK3-216ENST00000564468 ZMYM2Q9UBW7 1377 aa14.76□□□□□ -0.05
CLK3-216ENST00000564468 H0YCG3 227 aa14.76□□□□□ -0.05
CLK3-216ENST00000564468 B4GALT5O43286 388 aa14.76□□□□□ -0.05
CLK3-216ENST00000564468 ZSCAN22P10073 491 aaPredicted RBP14.76□□□□□ -0.05
CLK3-216ENST00000564468 NASPP49321 788 aaPredicted RBP14.76□□□□□ -0.05
CLK3-216ENST00000564468 BMS1Q14692 1282 aaKnown RBP14.76□□□□□ -0.05
CLK3-216ENST00000564468 LONRF3Q496Y0 759 aa14.76□□□□□ -0.05
CLK3-216ENST00000564468 ATL3Q6DD88 541 aa14.76□□□□□ -0.05
CLK3-216ENST00000564468 AGMOQ6ZNB7 445 aa14.76□□□□□ -0.05
CLK3-216ENST00000564468 KRI1Q8N9T8 703 aaKnown RBP14.76□□□□□ -0.05
CLK3-216ENST00000564468 SMG8Q8ND04 991 aaKnown RBP14.76□□□□□ -0.05
CLK3-216ENST00000564468 EIF2AQ9BY44 585 aaKnown RBP14.76□□□□□ -0.05
CLK3-216ENST00000564468 CCDC113Q9H0I3 377 aa14.76□□□□□ -0.05
CLK3-216ENST00000564468 TMEM134Q9H6X4 195 aa14.76□□□□□ -0.05
CLK3-216ENST00000564468 KMT5AQ9NQR1 393 aa14.76□□□□□ -0.05
CLK3-216ENST00000564468 TLR9Q9NR96 1032 aa14.76□□□□□ -0.05
CLK3-216ENST00000564468 LARSQ9P2J5 1176 aaKnown RBP14.76□□□□□ -0.05
CLK3-216ENST00000564468 FBXO2Q9UK22 296 aaPredicted RBP14.76□□□□□ -0.05
CLK3-216ENST00000564468 ODF2LQ9ULJ1 636 aa14.76□□□□□ -0.05
CLK3-216ENST00000564468 TCHHQ07283 1943 aa14.75□□□□□ -0.05
CLK3-216ENST00000564468 FSD2A1L4K1 749 aa14.75□□□□□ -0.05
CLK3-216ENST00000564468 NPTXRO95502 500 aa14.75□□□□□ -0.05
CLK3-216ENST00000564468 F13A1P00488 732 aa14.75□□□□□ -0.05
CLK3-216ENST00000564468 PLS3P13797 630 aa14.75□□□□□ -0.05
CLK3-216ENST00000564468 LIG1P18858 919 aa14.75□□□□□ -0.05
CLK3-216ENST00000564468 PLCG1P19174 1290 aa14.75□□□□□ -0.05
CLK3-216ENST00000564468 SCP2P22307 547 aa14.75□□□□□ -0.05
CLK3-216ENST00000564468 NPTX2P47972 431 aa14.75□□□□□ -0.05
CLK3-216ENST00000564468 BCAR1P56945 870 aa14.75□□□□□ -0.05
CLK3-216ENST00000564468 GRIN1Q05586 938 aa14.75□□□□□ -0.05
CLK3-216ENST00000564468 BECN1Q14457 450 aa14.75□□□□□ -0.05
CLK3-216ENST00000564468 KARSQ15046 597 aaKnown RBP14.75□□□□□ -0.05
CLK3-216ENST00000564468 DCAF4L1Q3SXM0 396 aa14.75□□□□□ -0.05
CLK3-216ENST00000564468 TCEAL5Q5H9L2 206 aa14.75□□□□□ -0.05
CLK3-216ENST00000564468 DAW1Q8N136 415 aa14.75□□□□□ -0.05
CLK3-216ENST00000564468 SPRYD3Q8NCJ5 442 aa14.75□□□□□ -0.05
CLK3-216ENST00000564468 MICAL1Q8TDZ2 1067 aa14.75□□□□□ -0.05
CLK3-216ENST00000564468 SPIRE2Q8WWL2 714 aa14.75□□□□□ -0.05
CLK3-216ENST00000564468 MRPS27Q92552 414 aaKnown RBP14.75□□□□□ -0.05
CLK3-216ENST00000564468 LARP4BQ92615 738 aaKnown RBP14.75□□□□□ -0.05
CLK3-216ENST00000564468 TMEM169Q96HH4 297 aa14.75□□□□□ -0.05
CLK3-216ENST00000564468 NTPCRQ9BSD7 190 aaKnown RBP14.75□□□□□ -0.05
CLK3-216ENST00000564468 POLD4Q9HCU8 107 aa14.75□□□□□ -0.05
CLK3-216ENST00000564468 TBC1D13Q9NVG8 400 aa14.75□□□□□ -0.05
CLK3-216ENST00000564468 HCSTQ9UBK5 93 aa14.75□□□□□ -0.05
CLK3-216ENST00000564468 STK17AQ9UEE5 414 aa14.75□□□□□ -0.05
CLK3-216ENST00000564468 STK39Q9UEW8 545 aa14.75□□□□□ -0.05
CLK3-216ENST00000564468 MEIS3P2A8K0S8 358 aa14.74□□□□□ -0.05
CLK3-216ENST00000564468 SPTLC2O15270 562 aa14.74□□□□□ -0.05
CLK3-216ENST00000564468 INPPL1O15357 1258 aa14.74□□□□□ -0.05
CLK3-216ENST00000564468 ZC3H11AO75152 810 aaKnown RBP eCLIP14.74□□□□□ -0.05
CLK3-216ENST00000564468 PPP6R2O75170 966 aa14.74□□□□□ -0.05
CLK3-216ENST00000564468 NR1I2O75469 434 aa14.74□□□□□ -0.05
CLK3-216ENST00000564468 YEATS4O95619 227 aa14.74□□□□□ -0.05
CLK3-216ENST00000564468 KRT18P05783 430 aaKnown RBP14.74□□□□□ -0.05
CLK3-216ENST00000564468 DDIT3P35638 169 aa14.74□□□□□ -0.05
CLK3-216ENST00000564468 MAPK7Q13164 816 aa14.74□□□□□ -0.05
CLK3-216ENST00000564468 RRAGBQ5VZM2 374 aa14.74□□□□□ -0.05
CLK3-216ENST00000564468 CCDC73Q6ZRK6 1079 aa14.74□□□□□ -0.05
CLK3-216ENST00000564468 GPBP1Q86WP2 473 aa14.74□□□□□ -0.05
CLK3-216ENST00000564468 SLC39A11Q8N1S5 342 aa14.74□□□□□ -0.05
CLK3-216ENST00000564468 LINC00301Q8NCQ3 95 aa14.74□□□□□ -0.05
CLK3-216ENST00000564468 RAD54LQ92698 747 aa14.74□□□□□ -0.05
CLK3-216ENST00000564468 EPSTI1Q96J88 318 aa14.74□□□□□ -0.05
CLK3-216ENST00000564468 TMEM175Q9BSA9 504 aa14.74□□□□□ -0.05
CLK3-216ENST00000564468 MRPL4Q9BYD3 311 aaKnown RBP14.74□□□□□ -0.05
CLK3-216ENST00000564468 NRDE2Q9H7Z3 1164 aa14.74□□□□□ -0.05
CLK3-216ENST00000564468 BLOC1S4Q9NUP1 217 aa14.74□□□□□ -0.05
CLK3-216ENST00000564468 ARHGAP28Q9P2N2 729 aa14.74□□□□□ -0.05
CLK3-216ENST00000564468 CFAP45Q9UL16 551 aa14.74□□□□□ -0.05
CLK3-216ENST00000564468 MUC6Q6W4X9 2439 aa14.73□□□□□ -0.05
CLK3-216ENST00000564468 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP14.73□□□□□ -0.05
CLK3-216ENST00000564468 ALDH2P05091 517 aa14.73□□□□□ -0.05
CLK3-216ENST00000564468 DNAJB1P25685 340 aa14.73□□□□□ -0.05
CLK3-216ENST00000564468 ABCD1P33897 745 aa14.73□□□□□ -0.05
CLK3-216ENST00000564468 RAD51AP2Q09MP3 1159 aa14.73□□□□□ -0.05
CLK3-216ENST00000564468 STRN3Q13033 797 aa14.73□□□□□ -0.05
CLK3-216ENST00000564468 CAMK1Q14012 370 aa14.73□□□□□ -0.05
CLK3-216ENST00000564468 DHX8Q14562 1220 aaKnown RBP14.73□□□□□ -0.05
CLK3-216ENST00000564468 MCM6Q14566 821 aa14.73□□□□□ -0.05
CLK3-216ENST00000564468 ATF7IP2Q5U623 682 aa14.73□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms