RNA–Protein interactions for RNA: ENST00000564353.5

CLK3-215, Transcript of CDC like kinase 3, humanhuman

TSL 2

Gene CLK3, Length 2,847 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-215ENST00000564353 VPS41P49754 854 aa14.54□□□□□ -0.08
CLK3-215ENST00000564353 MXI1P50539 228 aa14.54□□□□□ -0.08
CLK3-215ENST00000564353 TKFCQ3LXA3 575 aa14.54□□□□□ -0.08
CLK3-215ENST00000564353 RSBN1LQ6PCB5 846 aaPredicted RBP14.54□□□□□ -0.08
CLK3-215ENST00000564353 POTEAQ6S8J7 498 aa14.54□□□□□ -0.08
CLK3-215ENST00000564353 KREMEN1Q96MU8 473 aa14.54□□□□□ -0.08
CLK3-215ENST00000564353 MRIQ9BWK5 157 aa14.54□□□□□ -0.08
CLK3-215ENST00000564353 RGS17Q9UGC6 210 aaPredicted RBP14.54□□□□□ -0.08
CLK3-215ENST00000564353 ANKRD62A6NC57 917 aa14.53□□□□□ -0.08
CLK3-215ENST00000564353 HMGB1P1B2RPK0 211 aaPredicted RBP14.53□□□□□ -0.08
CLK3-215ENST00000564353 CCDC188H7C350 402 aa14.53□□□□□ -0.08
CLK3-215ENST00000564353 SPOPO43791 374 aa14.53□□□□□ -0.08
CLK3-215ENST00000564353 CCDC172P0C7W6 258 aa14.53□□□□□ -0.08
CLK3-215ENST00000564353 KRT5P13647 590 aa14.53□□□□□ -0.08
CLK3-215ENST00000564353 SLC15A2Q16348 729 aa14.53□□□□□ -0.08
CLK3-215ENST00000564353 MCTP2Q6DN12 878 aa14.53□□□□□ -0.08
CLK3-215ENST00000564353 JAMLQ86YT9 394 aa14.53□□□□□ -0.08
CLK3-215ENST00000564353 EFCAB13Q8IY85 973 aa14.53□□□□□ -0.08
CLK3-215ENST00000564353 OTUD6BQ8N6M0 293 aa14.53□□□□□ -0.08
CLK3-215ENST00000564353 C7orf43Q8WVR3 580 aa14.53□□□□□ -0.08
CLK3-215ENST00000564353 FAM151AQ8WW52 585 aa14.53□□□□□ -0.08
CLK3-215ENST00000564353 CALR3Q96L12 384 aaKnown RBP14.53□□□□□ -0.08
CLK3-215ENST00000564353 SELENOSQ9BQE4 189 aa14.53□□□□□ -0.08
CLK3-215ENST00000564353 ODF2LQ9ULJ1 636 aa14.53□□□□□ -0.08
CLK3-215ENST00000564353 ASTN2O75129 1339 aaPredicted RBP14.53□□□□□ -0.08
CLK3-215ENST00000564353 A0A0A6YYK5 440 aaPredicted RBP14.53□□□□□ -0.08
CLK3-215ENST00000564353 H0YHG0 523 aa14.53□□□□□ -0.08
CLK3-215ENST00000564353 ADSSP30520 456 aa14.53□□□□□ -0.08
CLK3-215ENST00000564353 GJC1P36383 396 aa14.53□□□□□ -0.08
CLK3-215ENST00000564353 RPS6P62753 249 aaKnown RBP14.53□□□□□ -0.08
CLK3-215ENST00000564353 POU5F1Q01860 360 aaKnown RBP14.53□□□□□ -0.08
CLK3-215ENST00000564353 SPRED3Q2MJR0 410 aa14.53□□□□□ -0.08
CLK3-215ENST00000564353 XXYLT1Q8NBI6 393 aa14.53□□□□□ -0.08
CLK3-215ENST00000564353 C1orf54Q8WWF1 131 aa14.53□□□□□ -0.08
CLK3-215ENST00000564353 TATDN2Q93075 761 aa14.53□□□□□ -0.08
CLK3-215ENST00000564353 CNKSR1Q969H4 720 aa14.53□□□□□ -0.08
CLK3-215ENST00000564353 C10orf71Q711Q0 1435 aa14.53□□□□□ -0.08
CLK3-215ENST00000564353 QSER1Q2KHR3 1735 aa14.52□□□□□ -0.08
CLK3-215ENST00000564353 KIAA0754O94854 1291 aa14.52□□□□□ -0.08
CLK3-215ENST00000564353 P4HBP07237 508 aaKnown RBP14.52□□□□□ -0.08
CLK3-215ENST00000564353 CHRNB2P17787 502 aa14.52□□□□□ -0.08
CLK3-215ENST00000564353 TAS1R2Q8TE23 839 aa14.52□□□□□ -0.08
CLK3-215ENST00000564353 MKNK1Q9BUB5 465 aa14.52□□□□□ -0.08
CLK3-215ENST00000564353 SEMA4AQ9H3S1 761 aa14.52□□□□□ -0.08
CLK3-215ENST00000564353 A0A087WUV0 522 aaPredicted RBP14.52□□□□□ -0.09
CLK3-215ENST00000564353 SLC26A4O43511 780 aa14.52□□□□□ -0.09
CLK3-215ENST00000564353 PEX10O60683 326 aa14.52□□□□□ -0.09
CLK3-215ENST00000564353 CCNE2O96020 404 aa14.52□□□□□ -0.09
CLK3-215ENST00000564353 VCAM1P19320 739 aa14.52□□□□□ -0.09
CLK3-215ENST00000564353 QARSP47897 775 aaKnown RBP14.52□□□□□ -0.09
CLK3-215ENST00000564353 IFI35P80217 286 aaPredicted RBP14.52□□□□□ -0.09
CLK3-215ENST00000564353 ADCY1Q08828 1119 aa14.52□□□□□ -0.09
CLK3-215ENST00000564353 CCDC105Q8IYK2 499 aa14.52□□□□□ -0.09
CLK3-215ENST00000564353 PRELID2Q8N945 189 aa14.52□□□□□ -0.09
CLK3-215ENST00000564353 CLEC4DQ8WXI8 215 aa14.52□□□□□ -0.09
CLK3-215ENST00000564353 ATG4AQ8WYN0 398 aa14.52□□□□□ -0.09
CLK3-215ENST00000564353 ZNF653Q96CK0 615 aa14.52□□□□□ -0.09
CLK3-215ENST00000564353 PWWP2AQ96N64 755 aa14.52□□□□□ -0.09
CLK3-215ENST00000564353 ACCSQ96QU6 501 aa14.52□□□□□ -0.09
CLK3-215ENST00000564353 NUP85Q9BW27 656 aa14.52□□□□□ -0.09
CLK3-215ENST00000564353 AGO4Q9HCK5 861 aaKnown RBP14.52□□□□□ -0.09
CLK3-215ENST00000564353 SEL1LQ9UBV2 794 aa14.52□□□□□ -0.09
CLK3-215ENST00000564353 STK24Q9Y6E0 443 aa14.52□□□□□ -0.09
CLK3-215ENST00000564353 GOLGA6L10A0A0M3HER8 536 aa14.51□□□□□ -0.09
CLK3-215ENST00000564353 CES2O00748 559 aa14.51□□□□□ -0.09
CLK3-215ENST00000564353 RPL21P46778 160 aaKnown RBP14.51□□□□□ -0.09
CLK3-215ENST00000564353 PTENP60484 403 aa14.51□□□□□ -0.09
CLK3-215ENST00000564353 SLC29A2Q14542 456 aa14.51□□□□□ -0.09
CLK3-215ENST00000564353 PPP2R5AQ15172 486 aa14.51□□□□□ -0.09
CLK3-215ENST00000564353 SNRNP35Q16560 246 aaKnown RBP14.51□□□□□ -0.09
CLK3-215ENST00000564353 STYK1Q6J9G0 422 aa14.51□□□□□ -0.09
CLK3-215ENST00000564353 OTUD6AQ7L8S5 288 aa14.51□□□□□ -0.09
CLK3-215ENST00000564353 CD302Q8IX05 232 aa14.51□□□□□ -0.09
CLK3-215ENST00000564353 EPS8L1Q8TE68 723 aa14.51□□□□□ -0.09
CLK3-215ENST00000564353 BSNDQ8WZ55 320 aa14.51□□□□□ -0.09
CLK3-215ENST00000564353 ERP44Q9BS26 406 aa14.51□□□□□ -0.09
CLK3-215ENST00000564353 SLITRK6Q9H5Y7 841 aa14.51□□□□□ -0.09
CLK3-215ENST00000564353 EHMT1Q9H9B1 1298 aa14.51□□□□□ -0.09
CLK3-215ENST00000564353 MLXIPLQ9NP71 852 aa14.51□□□□□ -0.09
CLK3-215ENST00000564353 TRPC6Q9Y210 931 aa14.51□□□□□ -0.09
CLK3-215ENST00000564353 RIPK3Q9Y572 518 aa14.51□□□□□ -0.09
CLK3-215ENST00000564353 NCANO14594 1321 aa14.51□□□□□ -0.09
CLK3-215ENST00000564353 CLDN3O15551 220 aa14.51□□□□□ -0.09
CLK3-215ENST00000564353 PLS3P13797 630 aa14.51□□□□□ -0.09
CLK3-215ENST00000564353 IFNAR2P48551 515 aa14.51□□□□□ -0.09
CLK3-215ENST00000564353 SETQ01105 290 aaPredicted RBP14.51□□□□□ -0.09
CLK3-215ENST00000564353 CETN1Q12798 172 aa14.51□□□□□ -0.09
CLK3-215ENST00000564353 KIF22Q14807 665 aa14.51□□□□□ -0.09
CLK3-215ENST00000564353 INTS8Q75QN2 995 aaKnown RBP14.51□□□□□ -0.09
CLK3-215ENST00000564353 CYFIP1Q7L576 1253 aa14.51□□□□□ -0.09
CLK3-215ENST00000564353 PRUNE1Q86TP1 453 aa14.51□□□□□ -0.09
CLK3-215ENST00000564353 EPS8L3Q8TE67 593 aaKnown RBP14.51□□□□□ -0.09
CLK3-215ENST00000564353 RNF25Q96BH1 459 aaPredicted RBP14.51□□□□□ -0.09
CLK3-215ENST00000564353 AZI2Q9H6S1 392 aa14.51□□□□□ -0.09
CLK3-215ENST00000564353 DENND3A2RUS2 1198 aa14.51□□□□□ -0.09
CLK3-215ENST00000564353 NF2P35240 595 aa14.51□□□□□ -0.09
CLK3-215ENST00000564353 GPC5P78333 572 aa14.51□□□□□ -0.09
CLK3-215ENST00000564353 CCDC137Q6PK04 289 aaKnown RBP14.51□□□□□ -0.09
CLK3-215ENST00000564353 B3GNT9Q6UX72 402 aa14.51□□□□□ -0.09
CLK3-215ENST00000564353 PASD1Q8IV76 773 aa14.51□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms