RNA–Protein interactions for RNA: ENST00000564272.1

SHCBP1-203, Transcript of SHC binding and spindle associated 1, humanhuman

TSL 3

Gene SHCBP1, Length 530 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1-203ENST00000564272 TTLL13PA6NNM8 815 aa22.09■■□□□ 1.13
SHCBP1-203ENST00000564272 SSTR3P32745 418 aaPredicted RBP22.09■■□□□ 1.13
SHCBP1-203ENST00000564272 SMC1AQ14683 1233 aaKnown RBP22.09■■□□□ 1.13
SHCBP1-203ENST00000564272 SLC27A1Q6PCB7 646 aa22.09■■□□□ 1.13
SHCBP1-203ENST00000564272 KCNK18Q7Z418 384 aa22.09■■□□□ 1.13
SHCBP1-203ENST00000564272 DEPTORQ8TB45 409 aa22.09■■□□□ 1.13
SHCBP1-203ENST00000564272 GAD1Q99259 594 aa22.09■■□□□ 1.13
SHCBP1-203ENST00000564272 FZD8Q9H461 694 aa22.09■■□□□ 1.13
SHCBP1-203ENST00000564272 A0A1B0GUA9 196 aa22.08■■□□□ 1.13
SHCBP1-203ENST00000564272 ARL5CA6NH57 179 aa22.08■■□□□ 1.13
SHCBP1-203ENST00000564272 EYA4O95677 639 aa22.08■■□□□ 1.13
SHCBP1-203ENST00000564272 LIG1P18858 919 aa22.08■■□□□ 1.13
SHCBP1-203ENST00000564272 CA8P35219 290 aa22.08■■□□□ 1.13
SHCBP1-203ENST00000564272 NAMPTP43490 491 aa22.08■■□□□ 1.13
SHCBP1-203ENST00000564272 ZP2Q05996 745 aa22.08■■□□□ 1.13
SHCBP1-203ENST00000564272 ZRSR1Q15695 479 aaKnown RBP22.08■■□□□ 1.13
SHCBP1-203ENST00000564272 SMAD2Q15796 467 aaKnown RBP22.08■■□□□ 1.13
SHCBP1-203ENST00000564272 LLGL2Q6P1M3 1020 aa22.08■■□□□ 1.13
SHCBP1-203ENST00000564272 GJD3Q8N144 294 aa22.08■■□□□ 1.13
SHCBP1-203ENST00000564272 VPS52Q8N1B4 723 aa22.08■■□□□ 1.13
SHCBP1-203ENST00000564272 PRIMPOLQ96LW4 560 aa22.08■■□□□ 1.13
SHCBP1-203ENST00000564272 ZFP42Q96MM3 310 aa22.08■■□□□ 1.13
SHCBP1-203ENST00000564272 FAM193BQ96PV7 902 aaPredicted RBP22.08■■□□□ 1.13
SHCBP1-203ENST00000564272 VN1R3Q9BXE9 311 aa22.08■■□□□ 1.13
SHCBP1-203ENST00000564272 CCDC113Q9H0I3 377 aa22.08■■□□□ 1.13
SHCBP1-203ENST00000564272 ZBP1Q9H171 429 aa22.08■■□□□ 1.13
SHCBP1-203ENST00000564272 C2orf40Q9H1Z8 148 aa22.08■■□□□ 1.13
SHCBP1-203ENST00000564272 UBN1Q9NPG3 1134 aa22.08■■□□□ 1.13
SHCBP1-203ENST00000564272 KANSL3Q9P2N6 904 aa22.08■■□□□ 1.13
SHCBP1-203ENST00000564272 USP20Q9Y2K6 914 aa22.08■■□□□ 1.13
SHCBP1-203ENST00000564272 VWA3AA6NCI4 1184 aa22.07■■□□□ 1.12
SHCBP1-203ENST00000564272 C2orf71A6NGG8 1288 aa22.07■■□□□ 1.12
SHCBP1-203ENST00000564272 INPPL1O15357 1258 aa22.07■■□□□ 1.12
SHCBP1-203ENST00000564272 EDN1P05305 212 aa22.07■■□□□ 1.12
SHCBP1-203ENST00000564272 PRKCBP05771 671 aa22.07■■□□□ 1.12
SHCBP1-203ENST00000564272 AKAP5P24588 427 aa22.07■■□□□ 1.12
SHCBP1-203ENST00000564272 SCNN1GP51170 649 aa22.07■■□□□ 1.12
SHCBP1-203ENST00000564272 COASYQ13057 564 aa22.07■■□□□ 1.12
SHCBP1-203ENST00000564272 PPP2R5AQ15172 486 aa22.07■■□□□ 1.12
SHCBP1-203ENST00000564272 FAM187BQ17R55 369 aa22.07■■□□□ 1.12
SHCBP1-203ENST00000564272 DDX53Q86TM3 631 aaKnown RBP22.07■■□□□ 1.12
SHCBP1-203ENST00000564272 SMRP1Q8NCR6 262 aa22.07■■□□□ 1.12
SHCBP1-203ENST00000564272 AUTS2Q8WXX7 1259 aa22.07■■□□□ 1.12
SHCBP1-203ENST00000564272 RUSC1Q9BVN2 902 aa22.07■■□□□ 1.12
SHCBP1-203ENST00000564272 PDZD7Q9H5P4 517 aa22.07■■□□□ 1.12
SHCBP1-203ENST00000564272 MIOSQ9NXC5 875 aa22.07■■□□□ 1.12
SHCBP1-203ENST00000564272 DNM3Q9UQ16 869 aa22.07■■□□□ 1.12
SHCBP1-203ENST00000564272 FSD2A1L4K1 749 aa22.06■■□□□ 1.12
SHCBP1-203ENST00000564272 VPS37CA5D8V6 355 aaPredicted RBP22.06■■□□□ 1.12
SHCBP1-203ENST00000564272 CARNS1A5YM72 827 aa22.06■■□□□ 1.12
SHCBP1-203ENST00000564272 PRPF4BQ13523 1007 aaKnown RBP22.06■■□□□ 1.12
SHCBP1-203ENST00000564272 KCNC3Q14003 757 aa22.06■■□□□ 1.12
SHCBP1-203ENST00000564272 MAPK6Q16659 721 aa22.06■■□□□ 1.12
SHCBP1-203ENST00000564272 TMEM132AQ24JP5 1023 aa22.06■■□□□ 1.12
SHCBP1-203ENST00000564272 ADHFE1Q8IWW8 467 aa22.06■■□□□ 1.12
SHCBP1-203ENST00000564272 MRPL43Q8N983 215 aaKnown RBP22.06■■□□□ 1.12
SHCBP1-203ENST00000564272 KIFAP3Q92845 792 aa22.06■■□□□ 1.12
SHCBP1-203ENST00000564272 IFT74Q96LB3 600 aa22.06■■□□□ 1.12
SHCBP1-203ENST00000564272 PNMA5Q96PV4 448 aa22.06■■□□□ 1.12
SHCBP1-203ENST00000564272 TMEM175Q9BSA9 504 aa22.06■■□□□ 1.12
SHCBP1-203ENST00000564272 EPHX3Q9H6B9 360 aa22.06■■□□□ 1.12
SHCBP1-203ENST00000564272 PRKAG3Q9UGI9 489 aa22.06■■□□□ 1.12
SHCBP1-203ENST00000564272 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP22.05■■□□□ 1.12
SHCBP1-203ENST00000564272 HIP1RO75146 1068 aa22.05■■□□□ 1.12
SHCBP1-203ENST00000564272 COLGALT2Q8IYK4 626 aa22.05■■□□□ 1.12
SHCBP1-203ENST00000564272 HACE1Q8IYU2 909 aa22.05■■□□□ 1.12
SHCBP1-203ENST00000564272 PLIN2Q99541 437 aa22.05■■□□□ 1.12
SHCBP1-203ENST00000564272 KLK14Q9P0G3 267 aa22.05■■□□□ 1.12
SHCBP1-203ENST00000564272 PARP2Q9UGN5 583 aa22.05■■□□□ 1.12
SHCBP1-203ENST00000564272 GIT1Q9Y2X7 761 aa22.05■■□□□ 1.12
SHCBP1-203ENST00000564272 PRG3Q9Y2Y8 225 aaPredicted RBP22.05■■□□□ 1.12
SHCBP1-203ENST00000564272 USP15Q9Y4E8 981 aaPredicted RBP22.05■■□□□ 1.12
SHCBP1-203ENST00000564272 TDRD15B5MCY1 1934 aaKnown RBP22.05■■□□□ 1.12
SHCBP1-203ENST00000564272 NRP1O14786 923 aa22.04■■□□□ 1.12
SHCBP1-203ENST00000564272 N4BP3O15049 544 aa22.04■■□□□ 1.12
SHCBP1-203ENST00000564272 CLASP2O75122 1294 aaKnown RBP22.04■■□□□ 1.12
SHCBP1-203ENST00000564272 CXCL14O95715 111 aa22.04■■□□□ 1.12
SHCBP1-203ENST00000564272 SRGAP2BP0DMP2 458 aa22.04■■□□□ 1.12
SHCBP1-203ENST00000564272 CTSAP10619 480 aa22.04■■□□□ 1.12
SHCBP1-203ENST00000564272 DSC1Q08554 894 aa22.04■■□□□ 1.12
SHCBP1-203ENST00000564272 ARL6IP4Q66PJ3 421 aaKnown RBP22.04■■□□□ 1.12
SHCBP1-203ENST00000564272 RINT1Q6NUQ1 792 aa22.04■■□□□ 1.12
SHCBP1-203ENST00000564272 BRAPQ7Z569 592 aa22.04■■□□□ 1.12
SHCBP1-203ENST00000564272 DAW1Q8N136 415 aa22.04■■□□□ 1.12
SHCBP1-203ENST00000564272 APOL5Q9BWW9 433 aa22.04■■□□□ 1.12
SHCBP1-203ENST00000564272 MARCH5Q9NX47 278 aa22.04■■□□□ 1.12
SHCBP1-203ENST00000564272 FAN1Q9Y2M0 1017 aa22.04■■□□□ 1.12
SHCBP1-203ENST00000564272 C19orf67A6NJJ6 358 aa22.03■■□□□ 1.12
SHCBP1-203ENST00000564272 ACKR2O00590 384 aa22.03■■□□□ 1.12
SHCBP1-203ENST00000564272 ALDH2P05091 517 aa22.03■■□□□ 1.12
SHCBP1-203ENST00000564272 OR1G1P47890 313 aa22.03■■□□□ 1.12
SHCBP1-203ENST00000564272 HYIQ5T013 277 aa22.03■■□□□ 1.12
SHCBP1-203ENST00000564272 EEF1DP3Q658K8 133 aa22.03■■□□□ 1.12
SHCBP1-203ENST00000564272 ANKRD54Q6NXT1 300 aa22.03■■□□□ 1.12
SHCBP1-203ENST00000564272 TMEM184AQ6ZMB5 413 aa22.03■■□□□ 1.12
SHCBP1-203ENST00000564272 GSTCDQ8NEC7 633 aa22.03■■□□□ 1.12
SHCBP1-203ENST00000564272 CCDC169A6NNP5 214 aa22.02■■□□□ 1.12
SHCBP1-203ENST00000564272 F8W810 466 aa22.02■■□□□ 1.12
SHCBP1-203ENST00000564272 SSBP05455 408 aaKnown RBP eCLIP22.02■■□□□ 1.12
SHCBP1-203ENST00000564272 NPTX2P47972 431 aa22.02■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms