RNA–Protein interactions for RNA: ENST00000564247.1

CMTM3-208, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 2

Gene CMTM3, Length 1,127 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-208ENST00000564247 SMTNL1A8MU46 457 aa18.59■□□□□ 0.57
CMTM3-208ENST00000564247 BECN2A8MW95 431 aa18.59■□□□□ 0.57
CMTM3-208ENST00000564247 CCNE1P24864 410 aa18.59■□□□□ 0.57
CMTM3-208ENST00000564247 RABGGTBP53611 331 aa18.59■□□□□ 0.57
CMTM3-208ENST00000564247 PTENP60484 403 aa18.59■□□□□ 0.57
CMTM3-208ENST00000564247 TMEM62Q0P6H9 643 aa18.59■□□□□ 0.57
CMTM3-208ENST00000564247 MAPK6Q16659 721 aa18.59■□□□□ 0.57
CMTM3-208ENST00000564247 TPD52L1Q16890 204 aaPredicted RBP18.59■□□□□ 0.57
CMTM3-208ENST00000564247 KNOP1Q1ED39 458 aaKnown RBP18.59■□□□□ 0.57
CMTM3-208ENST00000564247 BMT2Q1RMZ1 405 aa18.59■□□□□ 0.57
CMTM3-208ENST00000564247 C11orf57Q6ZUT1 292 aaPredicted RBP18.59■□□□□ 0.57
CMTM3-208ENST00000564247 SRGAP1Q7Z6B7 1085 aa18.59■□□□□ 0.57
CMTM3-208ENST00000564247 NELFCDQ8IXH7 590 aa18.59■□□□□ 0.57
CMTM3-208ENST00000564247 KCNN1Q92952 543 aa18.59■□□□□ 0.57
CMTM3-208ENST00000564247 P2RX5Q93086 422 aa18.59■□□□□ 0.57
CMTM3-208ENST00000564247 BPIFA3Q9BQP9 254 aa18.59■□□□□ 0.57
CMTM3-208ENST00000564247 FDXACB1Q9BRP7 624 aaPredicted RBP18.59■□□□□ 0.57
CMTM3-208ENST00000564247 KIFC3Q9BVG8 833 aa18.59■□□□□ 0.57
CMTM3-208ENST00000564247 STRA6Q9BX79 667 aa18.59■□□□□ 0.57
CMTM3-208ENST00000564247 NFKBIZQ9BYH8 718 aa18.59■□□□□ 0.57
CMTM3-208ENST00000564247 FGFBP2Q9BYJ0 223 aa18.59■□□□□ 0.57
CMTM3-208ENST00000564247 RWDD2AQ9UIY3 292 aa18.59■□□□□ 0.57
CMTM3-208ENST00000564247 MYO9BQ13459 2157 aa18.58■□□□□ 0.57
CMTM3-208ENST00000564247 INO80B-WBP1J3KQ70 363 aa18.58■□□□□ 0.56
CMTM3-208ENST00000564247 CALUO43852 315 aaPredicted RBP18.58■□□□□ 0.56
CMTM3-208ENST00000564247 PPP1R37O75864 691 aa18.58■□□□□ 0.56
CMTM3-208ENST00000564247 CHRNA1P02708 482 aa18.58■□□□□ 0.56
CMTM3-208ENST00000564247 MRPS6P82932 125 aaKnown RBP18.58■□□□□ 0.56
CMTM3-208ENST00000564247 GRIN2CQ14957 1233 aa18.58■□□□□ 0.56
CMTM3-208ENST00000564247 KIZQ2M2Z5 673 aa18.58■□□□□ 0.56
CMTM3-208ENST00000564247 CDCA2Q69YH5 1023 aaPredicted RBP18.58■□□□□ 0.56
CMTM3-208ENST00000564247 HS2ST1Q7LGA3 356 aa18.58■□□□□ 0.56
CMTM3-208ENST00000564247 IFNLR1Q8IU57 520 aaPredicted RBP18.58■□□□□ 0.56
CMTM3-208ENST00000564247 HERC6Q8IVU3 1022 aa18.58■□□□□ 0.56
CMTM3-208ENST00000564247 DBF4BQ8NFT6 615 aa18.58■□□□□ 0.56
CMTM3-208ENST00000564247 GOLGA5Q8TBA6 731 aa18.58■□□□□ 0.56
CMTM3-208ENST00000564247 FAM200AQ8TCP9 573 aa18.58■□□□□ 0.56
CMTM3-208ENST00000564247 ZNF668Q96K58 619 aaPredicted RBP18.58■□□□□ 0.56
CMTM3-208ENST00000564247 PPP1R16BQ96T49 567 aa18.58■□□□□ 0.56
CMTM3-208ENST00000564247 CELF4Q9BZC1 486 aaKnown RBP18.58■□□□□ 0.56
CMTM3-208ENST00000564247 NKX2-4Q9H2Z4 354 aa18.58■□□□□ 0.56
CMTM3-208ENST00000564247 SLC28A3Q9HAS3 691 aa18.58■□□□□ 0.56
CMTM3-208ENST00000564247 CTNND2Q9UQB3 1225 aa18.58■□□□□ 0.56
CMTM3-208ENST00000564247 GINS2Q9Y248 185 aa18.58■□□□□ 0.56
CMTM3-208ENST00000564247 ADGRA3Q8IWK6 1321 aa18.57■□□□□ 0.56
CMTM3-208ENST00000564247 PDXKO00764 312 aa18.57■□□□□ 0.56
CMTM3-208ENST00000564247 GPR32O75388 356 aa18.57■□□□□ 0.56
CMTM3-208ENST00000564247 MYOGP15173 224 aa18.57■□□□□ 0.56
CMTM3-208ENST00000564247 CRYBB1P53674 252 aaPredicted RBP18.57■□□□□ 0.56
CMTM3-208ENST00000564247 STX17P56962 302 aa18.57■□□□□ 0.56
CMTM3-208ENST00000564247 SNRPFP62306 86 aaKnown RBP18.57■□□□□ 0.56
CMTM3-208ENST00000564247 NCBP1Q09161 790 aaKnown RBP18.57■□□□□ 0.56
CMTM3-208ENST00000564247 MGAT3Q09327 533 aa18.57■□□□□ 0.56
CMTM3-208ENST00000564247 CENPPQ6IPU0 288 aa18.57■□□□□ 0.56
CMTM3-208ENST00000564247 ENOX1Q8TC92 643 aaKnown RBP18.57■□□□□ 0.56
CMTM3-208ENST00000564247 SEPT8Q92599 483 aa18.57■□□□□ 0.56
CMTM3-208ENST00000564247 BICD1Q96G01 975 aa18.57■□□□□ 0.56
CMTM3-208ENST00000564247 GBP3Q9H0R5 595 aa18.57■□□□□ 0.56
CMTM3-208ENST00000564247 ADAMTS10Q9H324 1103 aa18.57■□□□□ 0.56
CMTM3-208ENST00000564247 IFT122Q9HBG6 1241 aa18.57■□□□□ 0.56
CMTM3-208ENST00000564247 CGNQ9P2M7 1197 aaKnown RBP18.57■□□□□ 0.56
CMTM3-208ENST00000564247 TRPV2Q9Y5S1 764 aa18.57■□□□□ 0.56
CMTM3-208ENST00000564247 GOLGA6L19H0YKK7 550 aa18.56■□□□□ 0.56
CMTM3-208ENST00000564247 PRKCBP05771 671 aa18.56■□□□□ 0.56
CMTM3-208ENST00000564247 TPM4P67936 248 aa18.56■□□□□ 0.56
CMTM3-208ENST00000564247 LRRC63Q05C16 580 aa18.56■□□□□ 0.56
CMTM3-208ENST00000564247 PCBP1Q15365 356 aaKnown RBP eCLIP18.56■□□□□ 0.56
CMTM3-208ENST00000564247 PPP4R3CPQ6ZMV5 832 aa18.56■□□□□ 0.56
CMTM3-208ENST00000564247 MAP4K3Q8IVH8 894 aa18.56■□□□□ 0.56
CMTM3-208ENST00000564247 MYLIPQ8WY64 445 aa18.56■□□□□ 0.56
CMTM3-208ENST00000564247 APBB2Q92870 758 aa18.56■□□□□ 0.56
CMTM3-208ENST00000564247 OSBPL7Q9BZF2 842 aa18.56■□□□□ 0.56
CMTM3-208ENST00000564247 CBX8Q9HC52 389 aa18.56■□□□□ 0.56
CMTM3-208ENST00000564247 TYW1Q9NV66 732 aaKnown RBP18.56■□□□□ 0.56
CMTM3-208ENST00000564247 PRMT7Q9NVM4 692 aaPredicted RBP18.56■□□□□ 0.56
CMTM3-208ENST00000564247 IKBKBO14920 756 aa18.55■□□□□ 0.56
CMTM3-208ENST00000564247 FGFR1OPO95684 399 aaKnown RBP18.55■□□□□ 0.56
CMTM3-208ENST00000564247 EIF4BP23588 611 aaKnown RBP18.55■□□□□ 0.56
CMTM3-208ENST00000564247 RPL13P26373 211 aaKnown RBP18.55■□□□□ 0.56
CMTM3-208ENST00000564247 DEFB103AP81534 67 aa18.55■□□□□ 0.56
CMTM3-208ENST00000564247 MYL5Q02045 173 aa18.55■□□□□ 0.56
CMTM3-208ENST00000564247 MBTD1Q05BQ5 628 aa18.55■□□□□ 0.56
CMTM3-208ENST00000564247 KCNA1Q09470 495 aa18.55■□□□□ 0.56
CMTM3-208ENST00000564247 TMEM132AQ24JP5 1023 aa18.55■□□□□ 0.56
CMTM3-208ENST00000564247 SPATA1Q5VX52 437 aa18.55■□□□□ 0.56
CMTM3-208ENST00000564247 PPP2R2DQ66LE6 453 aa18.55■□□□□ 0.56
CMTM3-208ENST00000564247 ANKRD40Q6AI12 368 aa18.55■□□□□ 0.56
CMTM3-208ENST00000564247 FOXR2Q6PJQ5 311 aa18.55■□□□□ 0.56
CMTM3-208ENST00000564247 AOPEPQ8N6M6 819 aa18.55■□□□□ 0.56
CMTM3-208ENST00000564247 OSMRQ99650 979 aa18.55■□□□□ 0.56
CMTM3-208ENST00000564247 MRPL4Q9BYD3 311 aaKnown RBP18.55■□□□□ 0.56
CMTM3-208ENST00000564247 IFIH1Q9BYX4 1025 aaKnown RBP18.55■□□□□ 0.56
CMTM3-208ENST00000564247 KCTD10Q9H3F6 313 aa18.55■□□□□ 0.56
CMTM3-208ENST00000564247 FZD8Q9H461 694 aa18.55■□□□□ 0.56
CMTM3-208ENST00000564247 TRAF3IP3Q9Y228 551 aa18.55■□□□□ 0.56
CMTM3-208ENST00000564247 CDY2AQ9Y6F7 541 aa18.55■□□□□ 0.56
CMTM3-208ENST00000564247 TRANK1O15050 2925 aa18.55■□□□□ 0.56
CMTM3-208ENST00000564247 PRUNE2Q8WUY3 3088 aa18.55■□□□□ 0.56
CMTM3-208ENST00000564247 ACKR2O00590 384 aa18.54■□□□□ 0.56
CMTM3-208ENST00000564247 HNRNPDLO14979 420 aaKnown RBP18.54■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms