RNA–Protein interactions for RNA: ENST00000564096.1

CLK3-214, Transcript of CDC like kinase 3, humanhuman

TSL 2

Gene CLK3, Length 805 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-214ENST00000564096 TCP11X2Q5H9J9 407 aa14.01□□□□□ -0.17
CLK3-214ENST00000564096 ATF7IP2Q5U623 682 aa14.01□□□□□ -0.17
CLK3-214ENST00000564096 CEP135Q66GS9 1140 aa14.01□□□□□ -0.17
CLK3-214ENST00000564096 FILIP1Q7Z7B0 1213 aa14.01□□□□□ -0.17
CLK3-214ENST00000564096 CREBRFQ8IUR6 639 aa14.01□□□□□ -0.17
CLK3-214ENST00000564096 XXYLT1Q8NBI6 393 aa14.01□□□□□ -0.17
CLK3-214ENST00000564096 ADPGKQ9BRR6 497 aa14.01□□□□□ -0.17
CLK3-214ENST00000564096 TARS2Q9BW92 718 aaKnown RBP14.01□□□□□ -0.17
CLK3-214ENST00000564096 CELF4Q9BZC1 486 aaKnown RBP14.01□□□□□ -0.17
CLK3-214ENST00000564096 C11orf49Q9H6J7 331 aa14.01□□□□□ -0.17
CLK3-214ENST00000564096 KIAA1586Q9HCI6 787 aa14.01□□□□□ -0.17
CLK3-214ENST00000564096 SAMSN1Q9NSI8 373 aaKnown RBP14.01□□□□□ -0.17
CLK3-214ENST00000564096 HSPBP1Q9NZL4 362 aa14.01□□□□□ -0.17
CLK3-214ENST00000564096 PCDH10Q9P2E7 1040 aa14.01□□□□□ -0.17
CLK3-214ENST00000564096 CDY2AQ9Y6F7 541 aa14.01□□□□□ -0.17
CLK3-214ENST00000564096 DCDC2CA8MYV0 355 aa14□□□□□ -0.17
CLK3-214ENST00000564096 MAPK13O15264 365 aa14□□□□□ -0.17
CLK3-214ENST00000564096 CLDN3O15551 220 aa14□□□□□ -0.17
CLK3-214ENST00000564096 TSPAN1O60635 241 aa14□□□□□ -0.17
CLK3-214ENST00000564096 LDHAP00338 332 aaKnown RBP14□□□□□ -0.17
CLK3-214ENST00000564096 KRT13P13646 458 aa14□□□□□ -0.17
CLK3-214ENST00000564096 AXLP30530 894 aa14□□□□□ -0.17
CLK3-214ENST00000564096 SNX17Q15036 470 aa14□□□□□ -0.17
CLK3-214ENST00000564096 DCAF4L1Q3SXM0 396 aa14□□□□□ -0.17
CLK3-214ENST00000564096 HSP90AA4PQ58FG1 418 aa14□□□□□ -0.17
CLK3-214ENST00000564096 C1orf53Q5VUE5 145 aa14□□□□□ -0.17
CLK3-214ENST00000564096 MPZL3Q6UWV2 235 aa14□□□□□ -0.17
CLK3-214ENST00000564096 TSHZ1Q6ZSZ6 1077 aa14□□□□□ -0.17
CLK3-214ENST00000564096 FAM126BQ8IXS8 530 aa14□□□□□ -0.17
CLK3-214ENST00000564096 FAM186BQ8IYM0 893 aa14□□□□□ -0.17
CLK3-214ENST00000564096 GPD1LQ8N335 351 aa14□□□□□ -0.17
CLK3-214ENST00000564096 CCDC51Q96ER9 411 aa14□□□□□ -0.17
CLK3-214ENST00000564096 CBWD1Q9BRT8 395 aa14□□□□□ -0.17
CLK3-214ENST00000564096 TCHPQ9BT92 498 aa14□□□□□ -0.17
CLK3-214ENST00000564096 MSTO1Q9BUK6 570 aa14□□□□□ -0.17
CLK3-214ENST00000564096 TRIM5Q9C035 493 aa14□□□□□ -0.17
CLK3-214ENST00000564096 ARMCX3Q9UH62 379 aaPredicted RBP14□□□□□ -0.17
CLK3-214ENST00000564096 TNFSF13BQ9Y275 285 aa14□□□□□ -0.17
CLK3-214ENST00000564096 STYXL1Q9Y6J8 313 aa14□□□□□ -0.17
CLK3-214ENST00000564096 KAT6AQ92794 2004 aa13.99□□□□□ -0.17
CLK3-214ENST00000564096 PQBP1O60828 265 aaKnown RBP13.99□□□□□ -0.17
CLK3-214ENST00000564096 COL6A1P12109 1028 aa13.99□□□□□ -0.17
CLK3-214ENST00000564096 ATP1A3P13637 1013 aa13.99□□□□□ -0.17
CLK3-214ENST00000564096 PRKCSHP14314 528 aaPredicted RBP13.99□□□□□ -0.17
CLK3-214ENST00000564096 MARSP56192 900 aaKnown RBP13.99□□□□□ -0.17
CLK3-214ENST00000564096 FANCCQ00597 558 aa13.99□□□□□ -0.17
CLK3-214ENST00000564096 RBL2Q08999 1139 aa13.99□□□□□ -0.17
CLK3-214ENST00000564096 KYAT1Q16773 422 aa13.99□□□□□ -0.17
CLK3-214ENST00000564096 NOTUMQ6P988 496 aa13.99□□□□□ -0.17
CLK3-214ENST00000564096 INTS8Q75QN2 995 aaKnown RBP13.99□□□□□ -0.17
CLK3-214ENST00000564096 NECAB2Q7Z6G3 386 aa13.99□□□□□ -0.17
CLK3-214ENST00000564096 FRMD5Q7Z6J6 570 aa13.99□□□□□ -0.17
CLK3-214ENST00000564096 USP38Q8NB14 1042 aa13.99□□□□□ -0.17
CLK3-214ENST00000564096 ACO2Q99798 780 aaKnown RBP13.99□□□□□ -0.17
CLK3-214ENST00000564096 TRPV6Q9H1D0 765 aa13.99□□□□□ -0.17
CLK3-214ENST00000564096 HSD3B7Q9H2F3 369 aa13.99□□□□□ -0.17
CLK3-214ENST00000564096 MINDY3Q9H8M7 445 aa13.99□□□□□ -0.17
CLK3-214ENST00000564096 AGPAT5Q9NUQ2 364 aa13.99□□□□□ -0.17
CLK3-214ENST00000564096 DMAC2Q9NW81 257 aa13.99□□□□□ -0.17
CLK3-214ENST00000564096 LIMA1Q9UHB6 759 aaKnown RBP13.99□□□□□ -0.17
CLK3-214ENST00000564096 AGO2Q9UKV8 859 aaKnown RBP13.99□□□□□ -0.17
CLK3-214ENST00000564096 TISP43B9A030 160 aa13.98□□□□□ -0.17
CLK3-214ENST00000564096 ANKRD63C9JTQ0 380 aa13.98□□□□□ -0.17
CLK3-214ENST00000564096 PES1O00541 588 aaKnown RBP13.98□□□□□ -0.17
CLK3-214ENST00000564096 PITPNM1O00562 1244 aa13.98□□□□□ -0.17
CLK3-214ENST00000564096 EXTL3O43909 919 aa13.98□□□□□ -0.17
CLK3-214ENST00000564096 RPS6KA5O75582 802 aa13.98□□□□□ -0.17
CLK3-214ENST00000564096 AKAP3O75969 853 aa13.98□□□□□ -0.17
CLK3-214ENST00000564096 MCF2P10911 925 aa13.98□□□□□ -0.17
CLK3-214ENST00000564096 HARSP12081 509 aaKnown RBP13.98□□□□□ -0.17
CLK3-214ENST00000564096 CDK7P50613 346 aa13.98□□□□□ -0.17
CLK3-214ENST00000564096 ATN1P54259 1190 aaPredicted RBP13.98□□□□□ -0.17
CLK3-214ENST00000564096 UBASH3AP57075 661 aa13.98□□□□□ -0.17
CLK3-214ENST00000564096 MCL1Q07820 350 aa13.98□□□□□ -0.17
CLK3-214ENST00000564096 MGAT3Q09327 533 aa13.98□□□□□ -0.17
CLK3-214ENST00000564096 PAK2Q13177 524 aa13.98□□□□□ -0.17
CLK3-214ENST00000564096 KRT31Q15323 416 aa13.98□□□□□ -0.17
CLK3-214ENST00000564096 SNRNP35Q16560 246 aaKnown RBP13.98□□□□□ -0.17
CLK3-214ENST00000564096 AMHR2Q16671 573 aa13.98□□□□□ -0.17
CLK3-214ENST00000564096 MAN2A1Q16706 1144 aa13.98□□□□□ -0.17
CLK3-214ENST00000564096 FKBP15Q5T1M5 1219 aa13.98□□□□□ -0.17
CLK3-214ENST00000564096 SLC39A4Q6P5W5 647 aa13.98□□□□□ -0.17
CLK3-214ENST00000564096 SLC39A5Q6ZMH5 540 aa13.98□□□□□ -0.17
CLK3-214ENST00000564096 ANKRD33Q7Z3H0 272 aa13.98□□□□□ -0.17
CLK3-214ENST00000564096 DHX38Q92620 1227 aaKnown RBP13.98□□□□□ -0.17
CLK3-214ENST00000564096 EEF2KMTQ96G04 330 aa13.98□□□□□ -0.17
CLK3-214ENST00000564096 TOX2Q96NM4 488 aa13.98□□□□□ -0.17
CLK3-214ENST00000564096 TUBGCP2Q9BSJ2 902 aa13.98□□□□□ -0.17
CLK3-214ENST00000564096 NOC4LQ9BVI4 516 aaKnown RBP13.98□□□□□ -0.17
CLK3-214ENST00000564096 PCIF1Q9H4Z3 704 aa13.98□□□□□ -0.17
CLK3-214ENST00000564096 TAB2Q9NYJ8 693 aa13.98□□□□□ -0.17
CLK3-214ENST00000564096 PIN4Q9Y237 131 aaKnown RBP13.98□□□□□ -0.17
CLK3-214ENST00000564096 SQORQ9Y6N5 450 aa13.98□□□□□ -0.17
CLK3-214ENST00000564096 A0A0B4J269 797 aa13.97□□□□□ -0.17
CLK3-214ENST00000564096 GOLGA6L6A8MZA4 724 aa13.97□□□□□ -0.17
CLK3-214ENST00000564096 GPR182O15218 404 aa13.97□□□□□ -0.17
CLK3-214ENST00000564096 OGTO15294 1046 aa13.97□□□□□ -0.17
CLK3-214ENST00000564096 B4GALT5O43286 388 aa13.97□□□□□ -0.17
CLK3-214ENST00000564096 STX10O60499 249 aa13.97□□□□□ -0.17
CLK3-214ENST00000564096 CKBP12277 381 aa13.97□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 65.6 ms