RNA–Protein interactions for RNA: ENST00000563917.2

CLN6-203, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 557 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-203ENST00000563917 TSPAN1O60635 241 aa10.6□□□□□ -0.71
CLN6-203ENST00000563917 USO1O60763 962 aaKnown RBP10.6□□□□□ -0.71
CLN6-203ENST00000563917 FDPSP14324 419 aaKnown RBP10.6□□□□□ -0.71
CLN6-203ENST00000563917 HOXA11P31270 313 aaPredicted RBP10.6□□□□□ -0.71
CLN6-203ENST00000563917 MLH1P40692 756 aa10.6□□□□□ -0.71
CLN6-203ENST00000563917 PTPN5P54829 565 aa10.6□□□□□ -0.71
CLN6-203ENST00000563917 ORC2Q13416 577 aaPredicted RBP10.6□□□□□ -0.71
CLN6-203ENST00000563917 PTPN14Q15678 1187 aa10.6□□□□□ -0.71
CLN6-203ENST00000563917 UBXN11Q5T124 520 aa10.6□□□□□ -0.71
CLN6-203ENST00000563917 SLC27A1Q6PCB7 646 aa10.6□□□□□ -0.71
CLN6-203ENST00000563917 OTOP3Q7RTS5 596 aa10.6□□□□□ -0.71
CLN6-203ENST00000563917 TMEM173Q86WV6 379 aaPredicted RBP10.6□□□□□ -0.71
CLN6-203ENST00000563917 PIGOQ8TEQ8 1089 aa10.6□□□□□ -0.71
CLN6-203ENST00000563917 TNFRSF25Q93038 417 aa10.6□□□□□ -0.71
CLN6-203ENST00000563917 CPB2Q96IY4 423 aa10.6□□□□□ -0.71
CLN6-203ENST00000563917 NACC1Q96RE7 527 aa10.6□□□□□ -0.71
CLN6-203ENST00000563917 RPS6KC1Q96S38 1066 aa10.6□□□□□ -0.71
CLN6-203ENST00000563917 HSD17B14Q9BPX1 270 aa10.6□□□□□ -0.71
CLN6-203ENST00000563917 APOL6Q9BWW8 343 aa10.6□□□□□ -0.71
CLN6-203ENST00000563917 NFKBIZQ9BYH8 718 aa10.6□□□□□ -0.71
CLN6-203ENST00000563917 POLR3FQ9H1D9 316 aaPredicted RBP10.6□□□□□ -0.71
CLN6-203ENST00000563917 POMKQ9H5K3 350 aa10.6□□□□□ -0.71
CLN6-203ENST00000563917 TUFT1Q9NNX1 390 aa10.6□□□□□ -0.71
CLN6-203ENST00000563917 PRMT7Q9NVM4 692 aaPredicted RBP10.6□□□□□ -0.71
CLN6-203ENST00000563917 PARP2Q9UGN5 583 aa10.6□□□□□ -0.71
CLN6-203ENST00000563917 NOL7Q9UMY1 257 aaKnown RBP10.6□□□□□ -0.71
CLN6-203ENST00000563917 USTQ9Y2C2 406 aa10.6□□□□□ -0.71
CLN6-203ENST00000563917 GIT1Q9Y2X7 761 aa10.6□□□□□ -0.71
CLN6-203ENST00000563917 IPPQ9Y573 584 aa10.6□□□□□ -0.71
CLN6-203ENST00000563917 ARHGEF35A5YM69 484 aa10.59□□□□□ -0.71
CLN6-203ENST00000563917 ARL5CA6NH57 179 aa10.59□□□□□ -0.71
CLN6-203ENST00000563917 JAK2O60674 1132 aa10.59□□□□□ -0.71
CLN6-203ENST00000563917 DDHD2O94830 711 aa10.59□□□□□ -0.71
CLN6-203ENST00000563917 SOD2P04179 222 aa10.59□□□□□ -0.71
CLN6-203ENST00000563917 EPCAMP16422 314 aa10.59□□□□□ -0.71
CLN6-203ENST00000563917 ARL2P36404 184 aa10.59□□□□□ -0.71
CLN6-203ENST00000563917 GLUD2P49448 558 aa10.59□□□□□ -0.71
CLN6-203ENST00000563917 RBM25P49756 843 aaKnown RBP10.59□□□□□ -0.71
CLN6-203ENST00000563917 RARRES1P49788 294 aa10.59□□□□□ -0.71
CLN6-203ENST00000563917 HMGN5P82970 282 aaKnown RBP10.59□□□□□ -0.71
CLN6-203ENST00000563917 NHLH1Q02575 133 aa10.59□□□□□ -0.71
CLN6-203ENST00000563917 HAUS3Q68CZ6 603 aa10.59□□□□□ -0.71
CLN6-203ENST00000563917 TMC5Q6UXY8 1006 aa10.59□□□□□ -0.71
CLN6-203ENST00000563917 CCDC149Q6ZUS6 474 aa10.59□□□□□ -0.71
CLN6-203ENST00000563917 MAEAQ7L5Y9 396 aa10.59□□□□□ -0.71
CLN6-203ENST00000563917 APBB1IPQ7Z5R6 666 aaPredicted RBP10.59□□□□□ -0.71
CLN6-203ENST00000563917 IFNLR1Q8IU57 520 aaPredicted RBP10.59□□□□□ -0.71
CLN6-203ENST00000563917 C12orf76Q8N812 135 aaPredicted RBP10.59□□□□□ -0.71
CLN6-203ENST00000563917 KREMEN2Q8NCW0 462 aa10.59□□□□□ -0.71
CLN6-203ENST00000563917 PRIMPOLQ96LW4 560 aa10.59□□□□□ -0.71
CLN6-203ENST00000563917 ZSCAN31Q96LW9 406 aaPredicted RBP10.59□□□□□ -0.71
CLN6-203ENST00000563917 KLHL5Q96PQ7 755 aa10.59□□□□□ -0.71
CLN6-203ENST00000563917 GAD1Q99259 594 aa10.59□□□□□ -0.71
CLN6-203ENST00000563917 ADPGKQ9BRR6 497 aa10.59□□□□□ -0.71
CLN6-203ENST00000563917 LLPHQ9BRT6 129 aaKnown RBP10.59□□□□□ -0.71
CLN6-203ENST00000563917 RAB34Q9BZG1 259 aa10.59□□□□□ -0.71
CLN6-203ENST00000563917 C2orf40Q9H1Z8 148 aa10.59□□□□□ -0.71
CLN6-203ENST00000563917 MFSD1Q9H3U5 465 aa10.59□□□□□ -0.71
CLN6-203ENST00000563917 XPNPEP1Q9NQW7 623 aa10.59□□□□□ -0.71
CLN6-203ENST00000563917 DAXXQ9UER7 740 aaPredicted RBP10.59□□□□□ -0.71
CLN6-203ENST00000563917 LIMCH1Q9UPQ0 1083 aa10.59□□□□□ -0.71
CLN6-203ENST00000563917 STK24Q9Y6E0 443 aa10.59□□□□□ -0.71
CLN6-203ENST00000563917 MUC6Q6W4X9 2439 aa10.59□□□□□ -0.71
CLN6-203ENST00000563917 POTEMA6NI47 508 aa10.58□□□□□ -0.72
CLN6-203ENST00000563917 C2CD4DB7Z1M9 353 aa10.58□□□□□ -0.72
CLN6-203ENST00000563917 N4BP3O15049 544 aa10.58□□□□□ -0.72
CLN6-203ENST00000563917 TADA2AO75478 443 aa10.58□□□□□ -0.72
CLN6-203ENST00000563917 LARGE1O95461 756 aa10.58□□□□□ -0.72
CLN6-203ENST00000563917 NPTXRO95502 500 aa10.58□□□□□ -0.72
CLN6-203ENST00000563917 GLUD1P00367 558 aa10.58□□□□□ -0.72
CLN6-203ENST00000563917 WEE2P0C1S8 567 aa10.58□□□□□ -0.72
CLN6-203ENST00000563917 OR52Z1P0C646 297 aa10.58□□□□□ -0.72
CLN6-203ENST00000563917 ARF4P18085 180 aaPredicted RBP10.58□□□□□ -0.72
CLN6-203ENST00000563917 GLRA2P23416 452 aa10.58□□□□□ -0.72
CLN6-203ENST00000563917 MRE11P49959 708 aa10.58□□□□□ -0.72
CLN6-203ENST00000563917 SCNN1GP51170 649 aa10.58□□□□□ -0.72
CLN6-203ENST00000563917 GUCY1B3Q02153 619 aa10.58□□□□□ -0.72
CLN6-203ENST00000563917 CREMQ03060 361 aa10.58□□□□□ -0.72
CLN6-203ENST00000563917 MBTD1Q05BQ5 628 aa10.58□□□□□ -0.72
CLN6-203ENST00000563917 CAPSQ13938 189 aa10.58□□□□□ -0.72
CLN6-203ENST00000563917 PPP2R5AQ15172 486 aa10.58□□□□□ -0.72
CLN6-203ENST00000563917 GPR149Q86SP6 731 aa10.58□□□□□ -0.72
CLN6-203ENST00000563917 COLGALT2Q8IYK4 626 aa10.58□□□□□ -0.72
CLN6-203ENST00000563917 ZDHHC14Q8IZN3 488 aa10.58□□□□□ -0.72
CLN6-203ENST00000563917 SMG8Q8ND04 991 aaKnown RBP10.58□□□□□ -0.72
CLN6-203ENST00000563917 DEPTORQ8TB45 409 aa10.58□□□□□ -0.72
CLN6-203ENST00000563917 ASAP3Q8TDY4 903 aa10.58□□□□□ -0.72
CLN6-203ENST00000563917 SLC22A17Q8WUG5 538 aa10.58□□□□□ -0.72
CLN6-203ENST00000563917 BCL7CQ8WUZ0 217 aaPredicted RBP10.58□□□□□ -0.72
CLN6-203ENST00000563917 STAMQ92783 540 aa10.58□□□□□ -0.72
CLN6-203ENST00000563917 IFT74Q96LB3 600 aa10.58□□□□□ -0.72
CLN6-203ENST00000563917 MTMR9Q96QG7 549 aa10.58□□□□□ -0.72
CLN6-203ENST00000563917 POLR3CQ9BUI4 534 aaPredicted RBP10.58□□□□□ -0.72
CLN6-203ENST00000563917 HERC2P3Q9BVR0 1158 aa10.58□□□□□ -0.72
CLN6-203ENST00000563917 EIF2AQ9BY44 585 aaKnown RBP10.58□□□□□ -0.72
CLN6-203ENST00000563917 FOXP1Q9H334 677 aaPredicted RBP10.58□□□□□ -0.72
CLN6-203ENST00000563917 PIDD1Q9HB75 910 aa10.58□□□□□ -0.72
CLN6-203ENST00000563917 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP10.58□□□□□ -0.72
CLN6-203ENST00000563917 KIF3AQ9Y496 699 aa10.58□□□□□ -0.72
CLN6-203ENST00000563917 HES2Q9Y543 173 aa10.58□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 68.1 ms