RNA–Protein interactions for RNA: ENST00000563856.1

CBFA2T3-205, Transcript of CBFA2/RUNX1 translocation partner 3, humanhuman

TSL 2

Gene CBFA2T3, Length 2,380 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBFA2T3-205ENST00000563856 SKIP12755 728 aa20.01■□□□□ 0.79
CBFA2T3-205ENST00000563856 DYNLL1P63167 89 aaKnown RBP20.01■□□□□ 0.79
CBFA2T3-205ENST00000563856 RNF220Q5VTB9 566 aa20.01■□□□□ 0.79
CBFA2T3-205ENST00000563856 PNMA1Q8ND90 353 aa20.01■□□□□ 0.79
CBFA2T3-205ENST00000563856 MYLK2Q9H1R3 596 aa20.01■□□□□ 0.79
CBFA2T3-205ENST00000563856 SEC63Q9UGP8 760 aaKnown RBP20.01■□□□□ 0.79
CBFA2T3-205ENST00000563856 SYNGAP1Q96PV0 1343 aa20.01■□□□□ 0.79
CBFA2T3-205ENST00000563856 ACTN1P12814 892 aa20.01■□□□□ 0.79
CBFA2T3-205ENST00000563856 VHLP40337 213 aa20.01■□□□□ 0.79
CBFA2T3-205ENST00000563856 NT5C2P49902 561 aa20.01■□□□□ 0.79
CBFA2T3-205ENST00000563856 STRN3Q13033 797 aa20.01■□□□□ 0.79
CBFA2T3-205ENST00000563856 KRT79Q5XKE5 535 aa20.01■□□□□ 0.79
CBFA2T3-205ENST00000563856 CGB2Q6NT52 195 aa20.01■□□□□ 0.79
CBFA2T3-205ENST00000563856 OTUD6AQ7L8S5 288 aa20.01■□□□□ 0.79
CBFA2T3-205ENST00000563856 ADAT2Q7Z6V5 191 aaKnown RBP20.01■□□□□ 0.79
CBFA2T3-205ENST00000563856 DGKHQ86XP1 1220 aa20.01■□□□□ 0.79
CBFA2T3-205ENST00000563856 DNAAF5Q86Y56 855 aa20.01■□□□□ 0.79
CBFA2T3-205ENST00000563856 U2AF1L4Q8WU68 220 aaKnown RBP20.01■□□□□ 0.79
CBFA2T3-205ENST00000563856 ZNF333Q96JL9 665 aa20.01■□□□□ 0.79
CBFA2T3-205ENST00000563856 C6orf50Q9HD87 102 aa20.01■□□□□ 0.79
CBFA2T3-205ENST00000563856 CETN3O15182 167 aa20■□□□□ 0.79
CBFA2T3-205ENST00000563856 TMEM253P0C7T8 217 aa20■□□□□ 0.79
CBFA2T3-205ENST00000563856 GNA11P29992 359 aa20■□□□□ 0.79
CBFA2T3-205ENST00000563856 COPB2P35606 906 aa20■□□□□ 0.79
CBFA2T3-205ENST00000563856 RBM5P52756 815 aaKnown RBP eCLIP20■□□□□ 0.79
CBFA2T3-205ENST00000563856 GALCP54803 685 aa20■□□□□ 0.79
CBFA2T3-205ENST00000563856 ATL2Q8NHH9 583 aa20■□□□□ 0.79
CBFA2T3-205ENST00000563856 GDAP1Q8TB36 358 aa20■□□□□ 0.79
CBFA2T3-205ENST00000563856 SPON1Q9HCB6 807 aa20■□□□□ 0.79
CBFA2T3-205ENST00000563856 BMP2KQ9NSY1 1161 aaPredicted RBP20■□□□□ 0.79
CBFA2T3-205ENST00000563856 NKIRAS1Q9NYS0 192 aa20■□□□□ 0.79
CBFA2T3-205ENST00000563856 HDAC9Q9UKV0 1011 aa20■□□□□ 0.79
CBFA2T3-205ENST00000563856 PPP1R9AQ9ULJ8 1098 aa20■□□□□ 0.79
CBFA2T3-205ENST00000563856 USP20Q9Y2K6 914 aa20■□□□□ 0.79
CBFA2T3-205ENST00000563856 PFASO15067 1338 aa20■□□□□ 0.79
CBFA2T3-205ENST00000563856 LAMB1P07942 1786 aa20■□□□□ 0.79
CBFA2T3-205ENST00000563856 DCTN3O75935 186 aa20■□□□□ 0.79
CBFA2T3-205ENST00000563856 GM2AP17900 193 aa20■□□□□ 0.79
CBFA2T3-205ENST00000563856 YARSP54577 528 aaKnown RBP20■□□□□ 0.79
CBFA2T3-205ENST00000563856 CALCRLQ16602 461 aa20■□□□□ 0.79
CBFA2T3-205ENST00000563856 EXOC3L4Q17RC7 722 aa20■□□□□ 0.79
CBFA2T3-205ENST00000563856 EDRF1Q3B7T1 1238 aa20■□□□□ 0.79
CBFA2T3-205ENST00000563856 TMEM119Q4V9L6 283 aa20■□□□□ 0.79
CBFA2T3-205ENST00000563856 DPY19L2P1Q6NXN4 242 aa20■□□□□ 0.79
CBFA2T3-205ENST00000563856 PPP1R21Q6ZMI0 780 aa20■□□□□ 0.79
CBFA2T3-205ENST00000563856 CYFIP1Q7L576 1253 aa20■□□□□ 0.79
CBFA2T3-205ENST00000563856 LONP2Q86WA8 852 aa20■□□□□ 0.79
CBFA2T3-205ENST00000563856 RTKN2Q8IZC4 609 aa20■□□□□ 0.79
CBFA2T3-205ENST00000563856 SUPT20HQ8NEM7 779 aa20■□□□□ 0.79
CBFA2T3-205ENST00000563856 ART4Q93070 314 aa20■□□□□ 0.79
CBFA2T3-205ENST00000563856 KANSL2Q9H9L4 492 aa20■□□□□ 0.79
CBFA2T3-205ENST00000563856 DMAP1Q9NPF5 467 aaPredicted RBP20■□□□□ 0.79
CBFA2T3-205ENST00000563856 DDX3XO00571 662 aaKnown RBP eCLIP19.99■□□□□ 0.79
CBFA2T3-205ENST00000563856 HGSO14964 777 aaPredicted RBP19.99■□□□□ 0.79
CBFA2T3-205ENST00000563856 GGPS1O95749 300 aa19.99■□□□□ 0.79
CBFA2T3-205ENST00000563856 TTLL1O95922 423 aa19.99■□□□□ 0.79
CBFA2T3-205ENST00000563856 SLC9A1P19634 815 aa19.99■□□□□ 0.79
CBFA2T3-205ENST00000563856 NAPAP54920 295 aa19.99■□□□□ 0.79
CBFA2T3-205ENST00000563856 PPATQ06203 517 aa19.99■□□□□ 0.79
CBFA2T3-205ENST00000563856 LONRF1Q17RB8 773 aa19.99■□□□□ 0.79
CBFA2T3-205ENST00000563856 UBAP2Q5T6F2 1119 aaKnown RBP19.99■□□□□ 0.79
CBFA2T3-205ENST00000563856 SPTY2D1Q68D10 685 aaPredicted RBP19.99■□□□□ 0.79
CBFA2T3-205ENST00000563856 RBM46Q8TBY0 533 aaKnown RBP19.99■□□□□ 0.79
CBFA2T3-205ENST00000563856 SNX29Q8TEQ0 813 aa19.99■□□□□ 0.79
CBFA2T3-205ENST00000563856 C18orf8Q96DM3 657 aa19.99■□□□□ 0.79
CBFA2T3-205ENST00000563856 ERP27Q96DN0 273 aa19.99■□□□□ 0.79
CBFA2T3-205ENST00000563856 LZTS2Q9BRK4 669 aa19.99■□□□□ 0.79
CBFA2T3-205ENST00000563856 TIPINQ9BVW5 301 aa19.99■□□□□ 0.79
CBFA2T3-205ENST00000563856 PITPNM3Q9BZ71 974 aa19.99■□□□□ 0.79
CBFA2T3-205ENST00000563856 MAD2L2Q9UI95 211 aa19.99■□□□□ 0.79
CBFA2T3-205ENST00000563856 USH1CQ9Y6N9 552 aa19.99■□□□□ 0.79
CBFA2T3-205ENST00000563856 MAPK13O15264 365 aa19.99■□□□□ 0.79
CBFA2T3-205ENST00000563856 CREB3O43889 395 aa19.99■□□□□ 0.79
CBFA2T3-205ENST00000563856 BRAFP15056 766 aa19.99■□□□□ 0.79
CBFA2T3-205ENST00000563856 PSMC4P43686 418 aa19.99■□□□□ 0.79
CBFA2T3-205ENST00000563856 SPDYAQ5MJ70 313 aa19.99■□□□□ 0.79
CBFA2T3-205ENST00000563856 ARHGAP18Q8N392 663 aa19.99■□□□□ 0.79
CBFA2T3-205ENST00000563856 SLC35G2Q8TBE7 412 aa19.99■□□□□ 0.79
CBFA2T3-205ENST00000563856 LRRC8CQ8TDW0 803 aa19.99■□□□□ 0.79
CBFA2T3-205ENST00000563856 CTNNBL1Q8WYA6 563 aaPredicted RBP19.99■□□□□ 0.79
CBFA2T3-205ENST00000563856 DNAJC19Q96DA6 116 aa19.99■□□□□ 0.79
CBFA2T3-205ENST00000563856 LRRC37BQ96QE4 947 aa19.99■□□□□ 0.79
CBFA2T3-205ENST00000563856 MTMR9Q96QG7 549 aa19.99■□□□□ 0.79
CBFA2T3-205ENST00000563856 SPZ1Q9BXG8 430 aa19.99■□□□□ 0.79
CBFA2T3-205ENST00000563856 PCMTD2Q9NV79 361 aa19.99■□□□□ 0.79
CBFA2T3-205ENST00000563856 NMRK1Q9NWW6 199 aa19.99■□□□□ 0.79
CBFA2T3-205ENST00000563856 PPP1R1BQ9UD71 204 aaPredicted RBP19.99■□□□□ 0.79
CBFA2T3-205ENST00000563856 JAG2Q9Y219 1238 aa19.99■□□□□ 0.79
CBFA2T3-205ENST00000563856 ZNF646O15015 1829 aaPredicted RBP19.98■□□□□ 0.79
CBFA2T3-205ENST00000563856 ECE2O60344 883 aa19.98■□□□□ 0.79
CBFA2T3-205ENST00000563856 VCAM1P19320 739 aa19.98■□□□□ 0.79
CBFA2T3-205ENST00000563856 LMNB1P20700 586 aa19.98■□□□□ 0.79
CBFA2T3-205ENST00000563856 PON1P27169 355 aa19.98■□□□□ 0.79
CBFA2T3-205ENST00000563856 DALRD3Q5D0E6 543 aaKnown RBP19.98■□□□□ 0.79
CBFA2T3-205ENST00000563856 FRMD5Q7Z6J6 570 aa19.98■□□□□ 0.79
CBFA2T3-205ENST00000563856 TRIM74Q86UV6 250 aa19.98■□□□□ 0.79
CBFA2T3-205ENST00000563856 TRIM73Q86UV7 250 aa19.98■□□□□ 0.79
CBFA2T3-205ENST00000563856 ZNF384Q8TF68 577 aa19.98■□□□□ 0.79
CBFA2T3-205ENST00000563856 NSUN4Q96CB9 384 aaKnown RBP19.98■□□□□ 0.79
CBFA2T3-205ENST00000563856 TBC1D10AQ9BXI6 508 aa19.98■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 113.1 ms