RNA–Protein interactions for RNA: ENST00000563623.5

ABCA3-203, Transcript of ATP binding cassette subfamily A member 3, humanhuman

TSL 1 (best)

Gene ABCA3, Length 3,649 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA3-203ENST00000563623 KCNJ2P63252 427 aa12.69□□□□□ -0.38
ABCA3-203ENST00000563623 DLG4P78352 724 aa12.69□□□□□ -0.38
ABCA3-203ENST00000563623 BFSP1Q12934 665 aa12.69□□□□□ -0.38
ABCA3-203ENST00000563623 KYNUQ16719 465 aa12.69□□□□□ -0.38
ABCA3-203ENST00000563623 CYP4F22Q6NT55 531 aa12.69□□□□□ -0.38
ABCA3-203ENST00000563623 TTC27Q6P3X3 843 aa12.69□□□□□ -0.38
ABCA3-203ENST00000563623 FAM228AQ86W67 206 aa12.69□□□□□ -0.38
ABCA3-203ENST00000563623 ARHGEF19Q8IW93 802 aa12.69□□□□□ -0.38
ABCA3-203ENST00000563623 ATG4AQ8WYN0 398 aa12.69□□□□□ -0.38
ABCA3-203ENST00000563623 PRCCQ92733 491 aaPredicted RBP12.69□□□□□ -0.38
ABCA3-203ENST00000563623 P3H4Q92791 437 aa12.69□□□□□ -0.38
ABCA3-203ENST00000563623 ZSWIM1Q9BR11 485 aa12.69□□□□□ -0.38
ABCA3-203ENST00000563623 HEMGNQ9BXL5 484 aa12.69□□□□□ -0.38
ABCA3-203ENST00000563623 NKIRAS1Q9NYS0 192 aa12.69□□□□□ -0.38
ABCA3-203ENST00000563623 CTNNAL1Q9UBT7 734 aa12.69□□□□□ -0.38
ABCA3-203ENST00000563623 PHLPP1O60346 1717 aa12.69□□□□□ -0.38
ABCA3-203ENST00000563623 SCN7AQ01118 1682 aa12.69□□□□□ -0.38
ABCA3-203ENST00000563623 MIF4GDA9UHW6 222 aaKnown RBP12.69□□□□□ -0.38
ABCA3-203ENST00000563623 IGF2BP3O00425 579 aaKnown RBP eCLIP12.69□□□□□ -0.38
ABCA3-203ENST00000563623 NDUFB10O96000 172 aa12.69□□□□□ -0.38
ABCA3-203ENST00000563623 PPATQ06203 517 aa12.69□□□□□ -0.38
ABCA3-203ENST00000563623 ABCB5Q2M3G0 1257 aa12.69□□□□□ -0.38
ABCA3-203ENST00000563623 ZDHHC24Q6UX98 284 aa12.69□□□□□ -0.38
ABCA3-203ENST00000563623 SRRM1Q8IYB3 904 aaKnown RBP12.69□□□□□ -0.38
ABCA3-203ENST00000563623 CERS5Q8N5B7 392 aa12.69□□□□□ -0.38
ABCA3-203ENST00000563623 ZNF564Q8TBZ8 553 aaPredicted RBP12.69□□□□□ -0.38
ABCA3-203ENST00000563623 NSMCE1Q8WV22 266 aa12.69□□□□□ -0.38
ABCA3-203ENST00000563623 ZDHHC18Q9NUE0 388 aa12.69□□□□□ -0.38
ABCA3-203ENST00000563623 GAKO14976 1311 aa12.69□□□□□ -0.38
ABCA3-203ENST00000563623 C5orf60A6NFR6 353 aa12.68□□□□□ -0.38
ABCA3-203ENST00000563623 BMP3P12645 472 aa12.68□□□□□ -0.38
ABCA3-203ENST00000563623 SPIRE1Q08AE8 756 aa12.68□□□□□ -0.38
ABCA3-203ENST00000563623 EPC2Q52LR7 807 aa12.68□□□□□ -0.38
ABCA3-203ENST00000563623 HP1BP3Q5SSJ5 553 aaPredicted RBP12.68□□□□□ -0.38
ABCA3-203ENST00000563623 GSTA5Q7RTV2 222 aa12.68□□□□□ -0.38
ABCA3-203ENST00000563623 FAM163AQ96GL9 167 aaPredicted RBP12.68□□□□□ -0.38
ABCA3-203ENST00000563623 DNAJC5Q9H3Z4 198 aa12.68□□□□□ -0.38
ABCA3-203ENST00000563623 USTQ9Y2C2 406 aa12.68□□□□□ -0.38
ABCA3-203ENST00000563623 IRS2Q9Y4H2 1338 aa12.68□□□□□ -0.38
ABCA3-203ENST00000563623 RIPK2O43353 540 aa12.68□□□□□ -0.38
ABCA3-203ENST00000563623 HIP1RO75146 1068 aa12.68□□□□□ -0.38
ABCA3-203ENST00000563623 BBOX1O75936 387 aa12.68□□□□□ -0.38
ABCA3-203ENST00000563623 GH2P01242 217 aa12.68□□□□□ -0.38
ABCA3-203ENST00000563623 CALCAP01258 141 aa12.68□□□□□ -0.38
ABCA3-203ENST00000563623 BRAFP15056 766 aa12.68□□□□□ -0.38
ABCA3-203ENST00000563623 COILP38432 576 aaPredicted RBP12.68□□□□□ -0.38
ABCA3-203ENST00000563623 KRT17Q04695 432 aa12.68□□□□□ -0.38
ABCA3-203ENST00000563623 XRCC4Q13426 336 aa12.68□□□□□ -0.38
ABCA3-203ENST00000563623 C2CD6Q53TS8 623 aa12.68□□□□□ -0.38
ABCA3-203ENST00000563623 RC3H1Q5TC82 1133 aaKnown RBP12.68□□□□□ -0.38
ABCA3-203ENST00000563623 DPY19L2P1Q6NXN4 242 aa12.68□□□□□ -0.38
ABCA3-203ENST00000563623 MICAL1Q8TDZ2 1067 aa12.68□□□□□ -0.38
ABCA3-203ENST00000563623 PGM2Q96G03 612 aa12.68□□□□□ -0.38
ABCA3-203ENST00000563623 PWWP2AQ96N64 755 aa12.68□□□□□ -0.38
ABCA3-203ENST00000563623 ZNF577Q9BSK1 485 aa12.68□□□□□ -0.38
ABCA3-203ENST00000563623 TRIM6Q9C030 488 aaPredicted RBP12.68□□□□□ -0.38
ABCA3-203ENST00000563623 NHSL1Q5SYE7 1610 aa12.68□□□□□ -0.38
ABCA3-203ENST00000563623 DIAPH2O60879 1101 aa12.68□□□□□ -0.38
ABCA3-203ENST00000563623 PAEPP09466 180 aa12.68□□□□□ -0.38
ABCA3-203ENST00000563623 MMP13P45452 471 aa12.68□□□□□ -0.38
ABCA3-203ENST00000563623 LACTBP83111 547 aaPredicted RBP12.68□□□□□ -0.38
ABCA3-203ENST00000563623 POU5F1Q01860 360 aaKnown RBP12.68□□□□□ -0.38
ABCA3-203ENST00000563623 CROCCP2Q86T23 111 aa12.68□□□□□ -0.38
ABCA3-203ENST00000563623 VSIG1Q86XK7 387 aa12.68□□□□□ -0.38
ABCA3-203ENST00000563623 DCAF4Q8WV16 495 aa12.68□□□□□ -0.38
ABCA3-203ENST00000563623 RUNDC3BQ96NL0 473 aa12.68□□□□□ -0.38
ABCA3-203ENST00000563623 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP12.68□□□□□ -0.38
ABCA3-203ENST00000563623 USP15Q9Y4E8 981 aaPredicted RBP12.68□□□□□ -0.38
ABCA3-203ENST00000563623 RPTORQ8N122 1335 aa12.68□□□□□ -0.38
ABCA3-203ENST00000563623 IGKV6D-41A0A0C4DH26 115 aa12.67□□□□□ -0.38
ABCA3-203ENST00000563623 CCDC189A1A4V9 331 aa12.67□□□□□ -0.38
ABCA3-203ENST00000563623 GTPBP10A4D1E9 387 aaKnown RBP12.67□□□□□ -0.38
ABCA3-203ENST00000563623 DDTLA6NHG4 134 aaPredicted RBP12.67□□□□□ -0.38
ABCA3-203ENST00000563623 DNAJC8O75937 253 aaPredicted RBP12.67□□□□□ -0.38
ABCA3-203ENST00000563623 RARAP10276 462 aa12.67□□□□□ -0.38
ABCA3-203ENST00000563623 HSPA6P17066 643 aa12.67□□□□□ -0.38
ABCA3-203ENST00000563623 VCAM1P19320 739 aa12.67□□□□□ -0.38
ABCA3-203ENST00000563623 MXI1P50539 228 aa12.67□□□□□ -0.38
ABCA3-203ENST00000563623 AUHQ13825 339 aaKnown RBP12.67□□□□□ -0.38
ABCA3-203ENST00000563623 COL23A1Q86Y22 540 aaPredicted RBP12.67□□□□□ -0.38
ABCA3-203ENST00000563623 NACC1Q96RE7 527 aa12.67□□□□□ -0.38
ABCA3-203ENST00000563623 PLVAPQ9BX97 442 aa12.67□□□□□ -0.38
ABCA3-203ENST00000563623 CDC42EP4Q9H3Q1 356 aaKnown RBP12.67□□□□□ -0.38
ABCA3-203ENST00000563623 A1CFQ9NQ94 594 aaKnown RBP12.67□□□□□ -0.38
ABCA3-203ENST00000563623 GRHL1Q9NZI5 618 aa12.67□□□□□ -0.38
ABCA3-203ENST00000563623 TRIM33Q9UPN9 1127 aa12.67□□□□□ -0.38
ABCA3-203ENST00000563623 NCANO14594 1321 aa12.67□□□□□ -0.38
ABCA3-203ENST00000563623 TBX3O15119 743 aa12.67□□□□□ -0.38
ABCA3-203ENST00000563623 SLITRK3O94933 977 aa12.67□□□□□ -0.38
ABCA3-203ENST00000563623 VAMP7P51809 220 aa12.67□□□□□ -0.38
ABCA3-203ENST00000563623 RWDD2BP57060 319 aa12.67□□□□□ -0.38
ABCA3-203ENST00000563623 CLUL1Q15846 466 aa12.67□□□□□ -0.38
ABCA3-203ENST00000563623 LACTB2Q53H82 288 aaPredicted RBP12.67□□□□□ -0.38
ABCA3-203ENST00000563623 INTS8Q75QN2 995 aaKnown RBP12.67□□□□□ -0.38
ABCA3-203ENST00000563623 ZNF720Q7Z2F6 126 aa12.67□□□□□ -0.38
ABCA3-203ENST00000563623 SLC13A5Q86YT5 568 aaPredicted RBP12.67□□□□□ -0.38
ABCA3-203ENST00000563623 ZC3H3Q8IXZ2 948 aaKnown RBP12.67□□□□□ -0.38
ABCA3-203ENST00000563623 ATXN2LQ8WWM7 1075 aaKnown RBP12.67□□□□□ -0.38
ABCA3-203ENST00000563623 C9orf72Q96LT7 481 aa12.67□□□□□ -0.38
ABCA3-203ENST00000563623 ZNF317Q96PQ6 595 aaPredicted RBP12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms