RNA–Protein interactions for RNA: ENST00000563590.2

CCDC187-201, Transcript of coiled-coil domain containing 187, humanhuman

TSL 1 (best)

Gene CCDC187, Length 3,543 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC187-201ENST00000563590 BHMG1C9JSJ3 638 aaPredicted RBP13.64□□□□□ -0.23
CCDC187-201ENST00000563590 CBX6O95503 412 aa13.64□□□□□ -0.23
CCDC187-201ENST00000563590 HLA-DOAP06340 250 aa13.64□□□□□ -0.23
CCDC187-201ENST00000563590 LINGO3P0C6S8 592 aa13.64□□□□□ -0.23
CCDC187-201ENST00000563590 ZBTB48P10074 688 aaPredicted RBP13.64□□□□□ -0.23
CCDC187-201ENST00000563590 EPHB2P29323 1055 aa13.64□□□□□ -0.23
CCDC187-201ENST00000563590 POTEBQ6S5H4 581 aa13.64□□□□□ -0.23
CCDC187-201ENST00000563590 NSMFQ6X4W1 530 aa13.64□□□□□ -0.23
CCDC187-201ENST00000563590 ZNF317Q96PQ6 595 aaPredicted RBP13.64□□□□□ -0.23
CCDC187-201ENST00000563590 ALG13Q9NP73 1137 aaKnown RBP13.64□□□□□ -0.23
CCDC187-201ENST00000563590 TXLNGQ9NUQ3 528 aa13.64□□□□□ -0.23
CCDC187-201ENST00000563590 ZBTB7AO95365 584 aa13.64□□□□□ -0.23
CCDC187-201ENST00000563590 AFPP02771 609 aaKnown RBP13.64□□□□□ -0.23
CCDC187-201ENST00000563590 CYP2J2P51589 502 aa13.64□□□□□ -0.23
CCDC187-201ENST00000563590 BLMHQ13867 455 aa13.64□□□□□ -0.23
CCDC187-201ENST00000563590 UBL4BQ8N7F7 174 aa13.64□□□□□ -0.23
CCDC187-201ENST00000563590 L3MBTL3Q96JM7 780 aaPredicted RBP13.64□□□□□ -0.23
CCDC187-201ENST00000563590 POP1Q99575 1024 aaKnown RBP13.64□□□□□ -0.23
CCDC187-201ENST00000563590 LRRC27Q9C0I9 530 aa13.64□□□□□ -0.23
CCDC187-201ENST00000563590 SUGT1Q9Y2Z0 365 aa13.64□□□□□ -0.23
CCDC187-201ENST00000563590 ANKRD36CQ5JPF3 1778 aa13.64□□□□□ -0.23
CCDC187-201ENST00000563590 FERP16591 822 aa13.64□□□□□ -0.23
CCDC187-201ENST00000563590 ADCY8P40145 1251 aa13.64□□□□□ -0.23
CCDC187-201ENST00000563590 RASSF2P50749 326 aa13.64□□□□□ -0.23
CCDC187-201ENST00000563590 CNGA2Q16280 664 aa13.64□□□□□ -0.23
CCDC187-201ENST00000563590 CFAP157Q5JU67 520 aa13.64□□□□□ -0.23
CCDC187-201ENST00000563590 DDX25Q9UHL0 483 aaKnown RBP13.64□□□□□ -0.23
CCDC187-201ENST00000563590 A0A1B0GVG6 124 aa13.63□□□□□ -0.23
CCDC187-201ENST00000563590 POTEFA5A3E0 1075 aa13.63□□□□□ -0.23
CCDC187-201ENST00000563590 ATMINO43313 823 aaPredicted RBP13.63□□□□□ -0.23
CCDC187-201ENST00000563590 POTEIP0CG38 1075 aa13.63□□□□□ -0.23
CCDC187-201ENST00000563590 KCNA3P22001 575 aa13.63□□□□□ -0.23
CCDC187-201ENST00000563590 ABL2P42684 1182 aa13.63□□□□□ -0.23
CCDC187-201ENST00000563590 RPS6KA3P51812 740 aa13.63□□□□□ -0.23
CCDC187-201ENST00000563590 MTM1Q13496 603 aa13.63□□□□□ -0.23
CCDC187-201ENST00000563590 ZNF268Q14587 947 aaPredicted RBP13.63□□□□□ -0.23
CCDC187-201ENST00000563590 POTEGQ6S5H5 508 aa13.63□□□□□ -0.23
CCDC187-201ENST00000563590 POTEEQ6S8J3 1075 aa13.63□□□□□ -0.23
CCDC187-201ENST00000563590 ATP8B4Q8TF62 1192 aa13.63□□□□□ -0.23
CCDC187-201ENST00000563590 C9orf72Q96LT7 481 aa13.63□□□□□ -0.23
CCDC187-201ENST00000563590 A0A1B0GUL6 1792 aa13.63□□□□□ -0.23
CCDC187-201ENST00000563590 TXNDC9O14530 226 aa13.63□□□□□ -0.23
CCDC187-201ENST00000563590 BBOX1O75936 387 aa13.63□□□□□ -0.23
CCDC187-201ENST00000563590 YY1P25490 414 aa13.63□□□□□ -0.23
CCDC187-201ENST00000563590 FXR2P51116 673 aaKnown RBP eCLIP13.63□□□□□ -0.23
CCDC187-201ENST00000563590 NFIAQ12857 509 aa13.63□□□□□ -0.23
CCDC187-201ENST00000563590 CEP63Q96MT8 703 aa13.63□□□□□ -0.23
CCDC187-201ENST00000563590 IKZF4Q9H2S9 585 aa13.63□□□□□ -0.23
CCDC187-201ENST00000563590 TBCAO75347 108 aaKnown RBP13.63□□□□□ -0.23
CCDC187-201ENST00000563590 DLATP10515 647 aaKnown RBP13.63□□□□□ -0.23
CCDC187-201ENST00000563590 RPL21P46778 160 aaKnown RBP13.63□□□□□ -0.23
CCDC187-201ENST00000563590 CUL3Q13618 768 aa13.63□□□□□ -0.23
CCDC187-201ENST00000563590 PPP1R15BQ5SWA1 713 aa13.63□□□□□ -0.23
CCDC187-201ENST00000563590 HHATQ5VTY9 493 aa13.63□□□□□ -0.23
CCDC187-201ENST00000563590 ISLR2Q6UXK2 745 aa13.63□□□□□ -0.23
CCDC187-201ENST00000563590 RBM46Q8TBY0 533 aaKnown RBP13.63□□□□□ -0.23
CCDC187-201ENST00000563590 ATXN2LQ8WWM7 1075 aaKnown RBP13.63□□□□□ -0.23
CCDC187-201ENST00000563590 PWWP2AQ96N64 755 aa13.63□□□□□ -0.23
CCDC187-201ENST00000563590 BTNL10A8MVZ5 291 aa13.62□□□□□ -0.23
CCDC187-201ENST00000563590 RASA4BC9J798 803 aa13.62□□□□□ -0.23
CCDC187-201ENST00000563590 RASA4O43374 803 aa13.62□□□□□ -0.23
CCDC187-201ENST00000563590 OPHN1O60890 802 aa13.62□□□□□ -0.23
CCDC187-201ENST00000563590 ATP5DP30049 168 aa13.62□□□□□ -0.23
CCDC187-201ENST00000563590 TUBP50607 506 aa13.62□□□□□ -0.23
CCDC187-201ENST00000563590 LRRC36Q1X8D7 754 aa13.62□□□□□ -0.23
CCDC187-201ENST00000563590 SLC10A5Q5PT55 438 aa13.62□□□□□ -0.23
CCDC187-201ENST00000563590 CCDC77Q9BR77 488 aa13.62□□□□□ -0.23
CCDC187-201ENST00000563590 SDAD1Q9NVU7 687 aaKnown RBP eCLIP13.62□□□□□ -0.23
CCDC187-201ENST00000563590 TNKS1BP1Q9C0C2 1729 aaKnown RBP13.62□□□□□ -0.23
CCDC187-201ENST00000563590 RASA1P20936 1047 aa13.62□□□□□ -0.23
CCDC187-201ENST00000563590 MMP13P45452 471 aa13.62□□□□□ -0.23
CCDC187-201ENST00000563590 FBXO33Q7Z6M2 555 aa13.62□□□□□ -0.23
CCDC187-201ENST00000563590 NT5DC3Q86UY8 548 aa13.62□□□□□ -0.23
CCDC187-201ENST00000563590 EXOC3L1Q86VI1 746 aa13.62□□□□□ -0.23
CCDC187-201ENST00000563590 SUPT20HQ8NEM7 779 aa13.62□□□□□ -0.23
CCDC187-201ENST00000563590 SPZ1Q9BXG8 430 aa13.62□□□□□ -0.23
CCDC187-201ENST00000563590 ADAM7Q9H2U9 754 aa13.62□□□□□ -0.23
CCDC187-201ENST00000563590 EPB41L4BQ9H329 900 aa13.62□□□□□ -0.23
CCDC187-201ENST00000563590 MYH4Q9Y623 1939 aa13.62□□□□□ -0.23
CCDC187-201ENST00000563590 A0A0G2JND7 137 aa13.61□□□□□ -0.23
CCDC187-201ENST00000563590 NVLO15381 856 aaKnown RBP13.61□□□□□ -0.23
CCDC187-201ENST00000563590 GNA14O95837 355 aa13.61□□□□□ -0.23
CCDC187-201ENST00000563590 ATP2B4P23634 1241 aa13.61□□□□□ -0.23
CCDC187-201ENST00000563590 ALDH1B1P30837 517 aa13.61□□□□□ -0.23
CCDC187-201ENST00000563590 RAB27AP51159 221 aa13.61□□□□□ -0.23
CCDC187-201ENST00000563590 IL9RQ01113 521 aa13.61□□□□□ -0.23
CCDC187-201ENST00000563590 NBPF20Q3BBV1 942 aa13.61□□□□□ -0.23
CCDC187-201ENST00000563590 TMEM119Q4V9L6 283 aa13.61□□□□□ -0.23
CCDC187-201ENST00000563590 C4orf33Q8N1A6 199 aa13.61□□□□□ -0.23
CCDC187-201ENST00000563590 RASGEF1CQ8N431 466 aa13.61□□□□□ -0.23
CCDC187-201ENST00000563590 UCMAQ8WVF2 138 aa13.61□□□□□ -0.23
CCDC187-201ENST00000563590 SCFD1Q8WVM8 642 aa13.61□□□□□ -0.23
CCDC187-201ENST00000563590 AJAP1Q9UKB5 411 aaPredicted RBP13.61□□□□□ -0.23
CCDC187-201ENST00000563590 SHANK3Q9BYB0 1731 aa13.61□□□□□ -0.23
CCDC187-201ENST00000563590 PASKQ96RG2 1323 aa13.61□□□□□ -0.23
CCDC187-201ENST00000563590 CFAP69A5D8W1 941 aa13.61□□□□□ -0.23
CCDC187-201ENST00000563590 KLHL33A6NCF5 533 aa13.61□□□□□ -0.23
CCDC187-201ENST00000563590 EDIL3O43854 480 aa13.61□□□□□ -0.23
CCDC187-201ENST00000563590 PFDN1O60925 122 aa13.61□□□□□ -0.23
CCDC187-201ENST00000563590 RAD17O75943 681 aa13.61□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms