RNA–Protein interactions for RNA: ENST00000563485.2

HMGB1P33-201, Transcript of high mobility group box 1 pseudogene 33, humanhuman

BASIC

Gene HMGB1P33, Length 527 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P33-201ENST00000563485 WNT3AP56704 352 aa4.76□□□□□ -1.65
HMGB1P33-201ENST00000563485 PDCD1Q15116 288 aa4.76□□□□□ -1.65
HMGB1P33-201ENST00000563485 DHCR24Q15392 516 aa4.76□□□□□ -1.65
HMGB1P33-201ENST00000563485 RNF180Q86T96 592 aa4.76□□□□□ -1.65
HMGB1P33-201ENST00000563485 NOP9Q86U38 636 aaKnown RBP4.76□□□□□ -1.65
HMGB1P33-201ENST00000563485 XYLT1Q86Y38 959 aa4.76□□□□□ -1.65
HMGB1P33-201ENST00000563485 THNSL2Q86YJ6 484 aa4.76□□□□□ -1.65
HMGB1P33-201ENST00000563485 OR52N2Q8NGI0 321 aa4.76□□□□□ -1.65
HMGB1P33-201ENST00000563485 OR14C36Q8NHC7 312 aa4.76□□□□□ -1.65
HMGB1P33-201ENST00000563485 CPT1CQ8TCG5 803 aa4.76□□□□□ -1.65
HMGB1P33-201ENST00000563485 KCTD10Q9H3F6 313 aa4.76□□□□□ -1.65
HMGB1P33-201ENST00000563485 TOPORSQ9NS56 1045 aaPredicted RBP4.76□□□□□ -1.65
HMGB1P33-201ENST00000563485 KCNG1Q9UIX4 513 aa4.76□□□□□ -1.65
HMGB1P33-201ENST00000563485 WDR3Q9UNX4 943 aaKnown RBP eCLIP4.76□□□□□ -1.65
HMGB1P33-201ENST00000563485 CDY2AQ9Y6F7 541 aa4.76□□□□□ -1.65
HMGB1P33-201ENST00000563485 NEMP1O14524 444 aa4.75□□□□□ -1.65
HMGB1P33-201ENST00000563485 PRAMEF4O60810 478 aa4.75□□□□□ -1.65
HMGB1P33-201ENST00000563485 SCAF4O95104 1147 aaKnown RBP4.75□□□□□ -1.65
HMGB1P33-201ENST00000563485 GYPEP15421 78 aa4.75□□□□□ -1.65
HMGB1P33-201ENST00000563485 LGALS4P56470 323 aa4.75□□□□□ -1.65
HMGB1P33-201ENST00000563485 PCSK4Q6UW60 755 aa4.75□□□□□ -1.65
HMGB1P33-201ENST00000563485 ABHD15Q6UXT9 468 aa4.75□□□□□ -1.65
HMGB1P33-201ENST00000563485 RHOUQ7L0Q8 258 aa4.75□□□□□ -1.65
HMGB1P33-201ENST00000563485 HDGFL2Q7Z4V5 671 aaPredicted RBP4.75□□□□□ -1.65
HMGB1P33-201ENST00000563485 MRGPRGQ86SM5 289 aa4.75□□□□□ -1.65
HMGB1P33-201ENST00000563485 MRGPREQ86SM8 312 aa4.75□□□□□ -1.65
HMGB1P33-201ENST00000563485 FAM83AQ86UY5 434 aa4.75□□□□□ -1.65
HMGB1P33-201ENST00000563485 ULK2Q8IYT8 1036 aa4.75□□□□□ -1.65
HMGB1P33-201ENST00000563485 RPUSD2Q8IZ73 545 aaKnown RBP4.75□□□□□ -1.65
HMGB1P33-201ENST00000563485 UBR7Q8N806 425 aa4.75□□□□□ -1.65
HMGB1P33-201ENST00000563485 GLB1L3Q8NCI6 653 aaPredicted RBP4.75□□□□□ -1.65
HMGB1P33-201ENST00000563485 CLRN3Q8NCR9 226 aa4.75□□□□□ -1.65
HMGB1P33-201ENST00000563485 RSAD2Q8WXG1 361 aa4.75□□□□□ -1.65
HMGB1P33-201ENST00000563485 HAS1Q92839 578 aa4.75□□□□□ -1.65
HMGB1P33-201ENST00000563485 PDCD2LQ9BRP1 358 aa4.75□□□□□ -1.65
HMGB1P33-201ENST00000563485 ZNF768Q9H5H4 540 aaKnown RBP4.75□□□□□ -1.65
HMGB1P33-201ENST00000563485 C11orf21Q9P2W6 132 aa4.75□□□□□ -1.65
HMGB1P33-201ENST00000563485 EDARQ9UNE0 448 aa4.75□□□□□ -1.65
HMGB1P33-201ENST00000563485 ZFP36P26651 326 aaKnown RBP4.74□□□□□ -1.65
HMGB1P33-201ENST00000563485 STRN3Q13033 797 aa4.74□□□□□ -1.65
HMGB1P33-201ENST00000563485 VPS72Q15906 364 aa4.74□□□□□ -1.65
HMGB1P33-201ENST00000563485 DOK3Q7L591 496 aa4.74□□□□□ -1.65
HMGB1P33-201ENST00000563485 STRA8Q7Z7C7 330 aa4.74□□□□□ -1.65
HMGB1P33-201ENST00000563485 LILRA3Q8N6C8 439 aaPredicted RBP4.74□□□□□ -1.65
HMGB1P33-201ENST00000563485 LENG9Q96B70 501 aa4.74□□□□□ -1.65
HMGB1P33-201ENST00000563485 EAF2Q96CJ1 260 aaPredicted RBP4.74□□□□□ -1.65
HMGB1P33-201ENST00000563485 TTPALQ9BTX7 342 aa4.74□□□□□ -1.65
HMGB1P33-201ENST00000563485 MLST8Q9BVC4 326 aa4.74□□□□□ -1.65
HMGB1P33-201ENST00000563485 IFT22Q9H7X7 185 aa4.74□□□□□ -1.65
HMGB1P33-201ENST00000563485 USP35Q9P2H5 1018 aa4.74□□□□□ -1.65
HMGB1P33-201ENST00000563485 EIF2B4Q9UI10 523 aaKnown RBP4.74□□□□□ -1.65
HMGB1P33-201ENST00000563485 HDAC5Q9UQL6 1122 aa4.74□□□□□ -1.65
HMGB1P33-201ENST00000563485 ZMYM3Q14202 1370 aa4.74□□□□□ -1.65
HMGB1P33-201ENST00000563485 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP4.73□□□□□ -1.65
HMGB1P33-201ENST00000563485 AHRRA9YTQ3 701 aa4.73□□□□□ -1.65
HMGB1P33-201ENST00000563485 TRIM24O15164 1050 aa4.73□□□□□ -1.65
HMGB1P33-201ENST00000563485 RAMP2O60895 175 aa4.73□□□□□ -1.65
HMGB1P33-201ENST00000563485 CANXP27824 592 aaKnown RBP4.73□□□□□ -1.65
HMGB1P33-201ENST00000563485 APOBEC3AP31941 199 aaPredicted RBP4.73□□□□□ -1.65
HMGB1P33-201ENST00000563485 INHBEP58166 350 aa4.73□□□□□ -1.65
HMGB1P33-201ENST00000563485 PURAQ00577 322 aaKnown RBP4.73□□□□□ -1.65
HMGB1P33-201ENST00000563485 MEF2AQ02078 507 aaPredicted RBP4.73□□□□□ -1.65
HMGB1P33-201ENST00000563485 CSRP2Q16527 193 aa4.73□□□□□ -1.65
HMGB1P33-201ENST00000563485 UGT8Q16880 541 aa4.73□□□□□ -1.65
HMGB1P33-201ENST00000563485 METTL24Q5JXM2 366 aa4.73□□□□□ -1.65
HMGB1P33-201ENST00000563485 DDX46Q7L014 1031 aaKnown RBP4.73□□□□□ -1.65
HMGB1P33-201ENST00000563485 GPRIN1Q7Z2K8 1008 aa4.73□□□□□ -1.65
HMGB1P33-201ENST00000563485 SYNE4Q8N205 404 aa4.73□□□□□ -1.65
HMGB1P33-201ENST00000563485 SNX33Q8WV41 574 aa4.73□□□□□ -1.65
HMGB1P33-201ENST00000563485 AGAP2Q99490 1192 aa4.73□□□□□ -1.65
HMGB1P33-201ENST00000563485 TTC1Q99614 292 aa4.73□□□□□ -1.65
HMGB1P33-201ENST00000563485 PRRX2Q99811 253 aa4.73□□□□□ -1.65
HMGB1P33-201ENST00000563485 NDC1Q9BTX1 674 aa4.73□□□□□ -1.65
HMGB1P33-201ENST00000563485 KCNH6Q9H252 994 aa4.73□□□□□ -1.65
HMGB1P33-201ENST00000563485 FZD1Q9UP38 647 aa4.73□□□□□ -1.65
HMGB1P33-201ENST00000563485 DMRT1Q9Y5R6 373 aa4.73□□□□□ -1.65
HMGB1P33-201ENST00000563485 TLDC2A0PJX2 215 aa4.72□□□□□ -1.65
HMGB1P33-201ENST00000563485 PRR5-ARHGAP8B1AHC4 643 aa4.72□□□□□ -1.65
HMGB1P33-201ENST00000563485 LEFTY2O00292 366 aa4.72□□□□□ -1.65
HMGB1P33-201ENST00000563485 FOXN1O15353 648 aa4.72□□□□□ -1.65
HMGB1P33-201ENST00000563485 ZEB2O60315 1214 aa4.72□□□□□ -1.65
HMGB1P33-201ENST00000563485 ULK1O75385 1050 aa4.72□□□□□ -1.65
HMGB1P33-201ENST00000563485 ITGA10O75578 1167 aa4.72□□□□□ -1.65
HMGB1P33-201ENST00000563485 RECQL4O94761 1208 aa4.72□□□□□ -1.65
HMGB1P33-201ENST00000563485 ITGB1P05556 798 aa4.72□□□□□ -1.65
HMGB1P33-201ENST00000563485 HSP90B1P14625 803 aaKnown RBP4.72□□□□□ -1.65
HMGB1P33-201ENST00000563485 CTSSP25774 331 aa4.72□□□□□ -1.65
HMGB1P33-201ENST00000563485 SESN3P58005 492 aa4.72□□□□□ -1.65
HMGB1P33-201ENST00000563485 FAM189BP81408 668 aa4.72□□□□□ -1.65
HMGB1P33-201ENST00000563485 APBA1Q02410 837 aa4.72□□□□□ -1.65
HMGB1P33-201ENST00000563485 FSTL1Q12841 308 aa4.72□□□□□ -1.65
HMGB1P33-201ENST00000563485 SMN1Q16637 294 aaKnown RBP4.72□□□□□ -1.65
HMGB1P33-201ENST00000563485 FSCN1Q16658 493 aaKnown RBP4.72□□□□□ -1.65
HMGB1P33-201ENST00000563485 CPEB4Q17RY0 729 aaKnown RBP eCLIP4.72□□□□□ -1.65
HMGB1P33-201ENST00000563485 KRTAP15-1Q3LI76 137 aa4.72□□□□□ -1.65
HMGB1P33-201ENST00000563485 C19orf54Q5BKX5 351 aa4.72□□□□□ -1.65
HMGB1P33-201ENST00000563485 ANKS6Q68DC2 871 aa4.72□□□□□ -1.65
HMGB1P33-201ENST00000563485 LRRC55Q6ZSA7 311 aa4.72□□□□□ -1.65
HMGB1P33-201ENST00000563485 VRK3Q8IV63 474 aa4.72□□□□□ -1.65
HMGB1P33-201ENST00000563485 MDM1Q8TC05 714 aa4.72□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 56.4 ms