RNA–Protein interactions for RNA: ENST00000563366.5

UBFD1-202, Transcript of ubiquitin family domain containing 1, humanhuman

TSL 3

Gene UBFD1, Length 709 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBFD1-202ENST00000563366 SNAI1O95863 264 aaPredicted RBP10.6□□□□□ -0.71
UBFD1-202ENST00000563366 GYPCP04921 128 aa10.6□□□□□ -0.71
UBFD1-202ENST00000563366 KRT13P13646 458 aa10.6□□□□□ -0.71
UBFD1-202ENST00000563366 ATP4AP20648 1035 aa10.6□□□□□ -0.71
UBFD1-202ENST00000563366 EFNA5P52803 228 aa10.6□□□□□ -0.71
UBFD1-202ENST00000563366 FCGRTP55899 365 aa10.6□□□□□ -0.71
UBFD1-202ENST00000563366 SH3BP2P78314 561 aa10.6□□□□□ -0.71
UBFD1-202ENST00000563366 CCZ1BP86790 482 aa10.6□□□□□ -0.71
UBFD1-202ENST00000563366 CCZ1P86791 482 aaPredicted RBP10.6□□□□□ -0.71
UBFD1-202ENST00000563366 ENPEPQ07075 957 aa10.6□□□□□ -0.71
UBFD1-202ENST00000563366 STRN3Q13033 797 aa10.6□□□□□ -0.71
UBFD1-202ENST00000563366 TRIM32Q13049 653 aa10.6□□□□□ -0.71
UBFD1-202ENST00000563366 CRHR2Q13324 411 aa10.6□□□□□ -0.71
UBFD1-202ENST00000563366 BRDTQ58F21 947 aaPredicted RBP10.6□□□□□ -0.71
UBFD1-202ENST00000563366 ZNF484Q5JVG2 852 aa10.6□□□□□ -0.71
UBFD1-202ENST00000563366 PLA2G2CQ5R387 149 aa10.6□□□□□ -0.71
UBFD1-202ENST00000563366 IER5Q5VY09 327 aa10.6□□□□□ -0.71
UBFD1-202ENST00000563366 CEP135Q66GS9 1140 aa10.6□□□□□ -0.71
UBFD1-202ENST00000563366 INTS8Q75QN2 995 aaKnown RBP10.6□□□□□ -0.71
UBFD1-202ENST00000563366 FAM186BQ8IYM0 893 aa10.6□□□□□ -0.71
UBFD1-202ENST00000563366 TC2NQ8N9U0 490 aa10.6□□□□□ -0.71
UBFD1-202ENST00000563366 TMEM161BQ8NDZ6 487 aa10.6□□□□□ -0.71
UBFD1-202ENST00000563366 EEF2KMTQ96G04 330 aa10.6□□□□□ -0.71
UBFD1-202ENST00000563366 ZNF830Q96NB3 372 aaPredicted RBP10.6□□□□□ -0.71
UBFD1-202ENST00000563366 PCYT2Q99447 389 aa10.6□□□□□ -0.71
UBFD1-202ENST00000563366 BAG1Q99933 345 aaPredicted RBP10.6□□□□□ -0.71
UBFD1-202ENST00000563366 EDEM3Q9BZQ6 932 aa10.6□□□□□ -0.71
UBFD1-202ENST00000563366 NUCKS1Q9H1E3 243 aaKnown RBP10.6□□□□□ -0.71
UBFD1-202ENST00000563366 XPNPEP1Q9NQW7 623 aa10.6□□□□□ -0.71
UBFD1-202ENST00000563366 KCND1Q9NSA2 647 aa10.6□□□□□ -0.71
UBFD1-202ENST00000563366 ZHX1Q9UKY1 873 aaPredicted RBP10.6□□□□□ -0.71
UBFD1-202ENST00000563366 TBX20Q9UMR3 447 aa10.6□□□□□ -0.71
UBFD1-202ENST00000563366 LUC7L2Q9Y383 392 aaKnown RBP10.6□□□□□ -0.71
UBFD1-202ENST00000563366 DAAM1Q9Y4D1 1078 aa10.6□□□□□ -0.71
UBFD1-202ENST00000563366 KAT6AQ92794 2004 aa10.6□□□□□ -0.71
UBFD1-202ENST00000563366 DOCK3Q8IZD9 2030 aa10.59□□□□□ -0.71
UBFD1-202ENST00000563366 GTPBP10A4D1E9 387 aaKnown RBP10.59□□□□□ -0.71
UBFD1-202ENST00000563366 RASSF10A6NK89 507 aa10.59□□□□□ -0.71
UBFD1-202ENST00000563366 MAGEB2O15479 319 aa10.59□□□□□ -0.71
UBFD1-202ENST00000563366 ASAP2O43150 1006 aa10.59□□□□□ -0.71
UBFD1-202ENST00000563366 ATP9BO43861 1147 aa10.59□□□□□ -0.71
UBFD1-202ENST00000563366 EXOC3O60645 756 aa10.59□□□□□ -0.71
UBFD1-202ENST00000563366 AKAP3O75969 853 aa10.59□□□□□ -0.71
UBFD1-202ENST00000563366 AFPP02771 609 aaKnown RBP10.59□□□□□ -0.71
UBFD1-202ENST00000563366 LGALS2P05162 132 aa10.59□□□□□ -0.71
UBFD1-202ENST00000563366 HOXD8P13378 290 aaPredicted RBP10.59□□□□□ -0.71
UBFD1-202ENST00000563366 CASP14P31944 242 aa10.59□□□□□ -0.71
UBFD1-202ENST00000563366 ARL2P36404 184 aa10.59□□□□□ -0.71
UBFD1-202ENST00000563366 ADCYAP1R1P41586 468 aa10.59□□□□□ -0.71
UBFD1-202ENST00000563366 TNFAIP2Q03169 654 aa10.59□□□□□ -0.71
UBFD1-202ENST00000563366 LRMPQ12912 555 aa10.59□□□□□ -0.71
UBFD1-202ENST00000563366 TFDP1Q14186 410 aa10.59□□□□□ -0.71
UBFD1-202ENST00000563366 KIF22Q14807 665 aa10.59□□□□□ -0.71
UBFD1-202ENST00000563366 PLCB4Q15147 1175 aa10.59□□□□□ -0.71
UBFD1-202ENST00000563366 SYCP1Q15431 976 aa10.59□□□□□ -0.71
UBFD1-202ENST00000563366 DGKDQ16760 1214 aa10.59□□□□□ -0.71
UBFD1-202ENST00000563366 FMNL3Q8IVF7 1028 aa10.59□□□□□ -0.71
UBFD1-202ENST00000563366 XXYLT1Q8NBI6 393 aa10.59□□□□□ -0.71
UBFD1-202ENST00000563366 NEK11Q8NG66 645 aa10.59□□□□□ -0.71
UBFD1-202ENST00000563366 OR6J1Q8NGC5 347 aa10.59□□□□□ -0.71
UBFD1-202ENST00000563366 NPLOC4Q8TAT6 608 aa10.59□□□□□ -0.71
UBFD1-202ENST00000563366 DEPTORQ8TB45 409 aa10.59□□□□□ -0.71
UBFD1-202ENST00000563366 PSPC1Q8WXF1 523 aaKnown RBP10.59□□□□□ -0.71
UBFD1-202ENST00000563366 USP6NLQ92738 828 aa10.59□□□□□ -0.71
UBFD1-202ENST00000563366 PBXIP1Q96AQ6 731 aa10.59□□□□□ -0.71
UBFD1-202ENST00000563366 SH2D3AQ9BRG2 576 aa10.59□□□□□ -0.71
UBFD1-202ENST00000563366 C2orf40Q9H1Z8 148 aa10.59□□□□□ -0.71
UBFD1-202ENST00000563366 TMX1Q9H3N1 280 aa10.59□□□□□ -0.71
UBFD1-202ENST00000563366 KIAA1586Q9HCI6 787 aa10.59□□□□□ -0.71
UBFD1-202ENST00000563366 GPRC5CQ9NQ84 441 aa10.59□□□□□ -0.71
UBFD1-202ENST00000563366 PDGFCQ9NRA1 345 aa10.59□□□□□ -0.71
UBFD1-202ENST00000563366 ABHD10Q9NUJ1 306 aa10.59□□□□□ -0.71
UBFD1-202ENST00000563366 DMAC2Q9NW81 257 aa10.59□□□□□ -0.71
UBFD1-202ENST00000563366 ZNHIT6Q9NWK9 470 aaKnown RBP10.59□□□□□ -0.71
UBFD1-202ENST00000563366 ARHGAP28Q9P2N2 729 aa10.59□□□□□ -0.71
UBFD1-202ENST00000563366 CAPN11Q9UMQ6 739 aa10.59□□□□□ -0.71
UBFD1-202ENST00000563366 Q9Y3F1 56 aa10.59□□□□□ -0.71
UBFD1-202ENST00000563366 GOLGA6L9A6NEM1 432 aa10.58□□□□□ -0.72
UBFD1-202ENST00000563366 HNRNPDLO14979 420 aaKnown RBP10.58□□□□□ -0.72
UBFD1-202ENST00000563366 ZSCAN12O43309 604 aa10.58□□□□□ -0.72
UBFD1-202ENST00000563366 N4BP1O75113 896 aaKnown RBP10.58□□□□□ -0.72
UBFD1-202ENST00000563366 TUBB4AP04350 444 aa10.58□□□□□ -0.72
UBFD1-202ENST00000563366 GARTP22102 1010 aa10.58□□□□□ -0.72
UBFD1-202ENST00000563366 TMOD1P28289 359 aa10.58□□□□□ -0.72
UBFD1-202ENST00000563366 KRT9P35527 623 aa10.58□□□□□ -0.72
UBFD1-202ENST00000563366 CPT1AP50416 773 aa10.58□□□□□ -0.72
UBFD1-202ENST00000563366 ZBED6P86452 979 aa10.58□□□□□ -0.72
UBFD1-202ENST00000563366 RBL2Q08999 1139 aa10.58□□□□□ -0.72
UBFD1-202ENST00000563366 KCNA1Q09470 495 aa10.58□□□□□ -0.72
UBFD1-202ENST00000563366 CETN1Q12798 172 aa10.58□□□□□ -0.72
UBFD1-202ENST00000563366 ARID5BQ14865 1188 aa10.58□□□□□ -0.72
UBFD1-202ENST00000563366 NOLC1Q14978 699 aaKnown RBP eCLIP10.58□□□□□ -0.72
UBFD1-202ENST00000563366 DEFB115Q30KQ5 88 aa10.58□□□□□ -0.72
UBFD1-202ENST00000563366 TCERG1LQ5VWI1 586 aa10.58□□□□□ -0.72
UBFD1-202ENST00000563366 SLFN12LQ6IEE8 588 aa10.58□□□□□ -0.72
UBFD1-202ENST00000563366 CYP26C1Q6V0L0 522 aa10.58□□□□□ -0.72
UBFD1-202ENST00000563366 TMTC1Q8IUR5 882 aa10.58□□□□□ -0.72
UBFD1-202ENST00000563366 ZBTB8OSQ8IWT0 167 aa10.58□□□□□ -0.72
UBFD1-202ENST00000563366 OR8K1Q8NGG5 319 aa10.58□□□□□ -0.72
UBFD1-202ENST00000563366 CEP89Q96ST8 783 aa10.58□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 62.5 ms