RNA–Protein interactions for RNA: ENST00000562680.5

TCF4-216, Transcript of transcription factor 4, humanhuman

TSL 1 (best)

Gene TCF4, Length 5,733 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-216ENST00000562680 PCDHAC2Q9Y5I4 1007 aa8.1□□□□□ -1.11
TCF4-216ENST00000562680 COL1A1P02452 1464 aaPredicted RBP8.1□□□□□ -1.11
TCF4-216ENST00000562680 SIPA1L3O60292 1781 aaPredicted RBP8.1□□□□□ -1.11
TCF4-216ENST00000562680 UBR2Q8IWV8 1755 aa8.1□□□□□ -1.11
TCF4-216ENST00000562680 LRRC53A6NM62 1247 aa8.1□□□□□ -1.11
TCF4-216ENST00000562680 HUS1O60921 280 aa8.1□□□□□ -1.11
TCF4-216ENST00000562680 ZBTB48P10074 688 aaPredicted RBP8.1□□□□□ -1.11
TCF4-216ENST00000562680 HNRNPH2P55795 449 aaKnown RBP8.1□□□□□ -1.11
TCF4-216ENST00000562680 GIT2Q14161 759 aa8.1□□□□□ -1.11
TCF4-216ENST00000562680 SLC30A10Q6XR72 485 aa8.1□□□□□ -1.11
TCF4-216ENST00000562680 SH3RF1Q7Z6J0 888 aa8.1□□□□□ -1.11
TCF4-216ENST00000562680 CCDC105Q8IYK2 499 aa8.1□□□□□ -1.11
TCF4-216ENST00000562680 SLC35F6Q8N357 371 aa8.1□□□□□ -1.11
TCF4-216ENST00000562680 RABGGTAQ92696 567 aa8.1□□□□□ -1.11
TCF4-216ENST00000562680 STK33Q9BYT3 514 aa8.1□□□□□ -1.11
TCF4-216ENST00000562680 ASIC3Q9UHC3 531 aa8.1□□□□□ -1.11
TCF4-216ENST00000562680 BAZ2BQ9UIF8 2168 aaKnown RBP8.1□□□□□ -1.11
TCF4-216ENST00000562680 SPDYE16A6NNV3 312 aaPredicted RBP8.1□□□□□ -1.11
TCF4-216ENST00000562680 CYP2C9P11712 490 aa8.1□□□□□ -1.11
TCF4-216ENST00000562680 SKIP12755 728 aa8.1□□□□□ -1.11
TCF4-216ENST00000562680 SARSP49591 514 aaKnown RBP8.1□□□□□ -1.11
TCF4-216ENST00000562680 HSD17B4P51659 736 aa8.1□□□□□ -1.11
TCF4-216ENST00000562680 SNRNP35Q16560 246 aaKnown RBP8.1□□□□□ -1.11
TCF4-216ENST00000562680 IQSEC1Q6DN90 963 aa8.1□□□□□ -1.11
TCF4-216ENST00000562680 DSTYKQ6XUX3 929 aa8.1□□□□□ -1.11
TCF4-216ENST00000562680 C17orf53Q8N3J3 647 aaPredicted RBP8.1□□□□□ -1.11
TCF4-216ENST00000562680 TSC1Q92574 1164 aa8.1□□□□□ -1.11
TCF4-216ENST00000562680 TNFRSF25Q93038 417 aa8.1□□□□□ -1.11
TCF4-216ENST00000562680 LRRC4Q9HBW1 653 aa8.1□□□□□ -1.11
TCF4-216ENST00000562680 TMEM8AQ9HCN3 771 aa8.1□□□□□ -1.11
TCF4-216ENST00000562680 MYH3P11055 1940 aa8.1□□□□□ -1.11
TCF4-216ENST00000562680 FAM86B1E9PN63 330 aa8.09□□□□□ -1.11
TCF4-216ENST00000562680 MYO1CO00159 1063 aa8.09□□□□□ -1.11
TCF4-216ENST00000562680 ZNF189O75820 626 aaPredicted RBP8.09□□□□□ -1.11
TCF4-216ENST00000562680 FAM86B2P0C5J1 330 aa8.09□□□□□ -1.11
TCF4-216ENST00000562680 SOX5P35711 763 aa8.09□□□□□ -1.11
TCF4-216ENST00000562680 KRT81Q14533 505 aa8.09□□□□□ -1.11
TCF4-216ENST00000562680 Q3C1V9 767 aa8.09□□□□□ -1.11
TCF4-216ENST00000562680 EARS2Q5JPH6 523 aaKnown RBP8.09□□□□□ -1.11
TCF4-216ENST00000562680 PLA2G4FQ68DD2 849 aa8.09□□□□□ -1.11
TCF4-216ENST00000562680 SH3BP5LQ7L8J4 393 aa8.09□□□□□ -1.11
TCF4-216ENST00000562680 SRGAP1Q7Z6B7 1085 aa8.09□□□□□ -1.11
TCF4-216ENST00000562680 THEM5Q8N1Q8 247 aa8.09□□□□□ -1.11
TCF4-216ENST00000562680 IFT81Q8WYA0 676 aa8.09□□□□□ -1.11
TCF4-216ENST00000562680 TMEM143Q96AN5 459 aa8.09□□□□□ -1.11
TCF4-216ENST00000562680 CYP39A1Q9NYL5 469 aa8.09□□□□□ -1.11
TCF4-216ENST00000562680 ADAMTS1Q9UHI8 967 aa8.09□□□□□ -1.11
TCF4-216ENST00000562680 TBX20Q9UMR3 447 aa8.09□□□□□ -1.11
TCF4-216ENST00000562680 SOWAHDA6NJG2 315 aa8.09□□□□□ -1.11
TCF4-216ENST00000562680 IRF6O14896 467 aa8.09□□□□□ -1.11
TCF4-216ENST00000562680 ZC3H11AO75152 810 aaKnown RBP eCLIP8.09□□□□□ -1.11
TCF4-216ENST00000562680 CD4P01730 458 aa8.09□□□□□ -1.11
TCF4-216ENST00000562680 OSTNP61366 133 aa8.09□□□□□ -1.11
TCF4-216ENST00000562680 RBP5P82980 135 aa8.09□□□□□ -1.11
TCF4-216ENST00000562680 DRAP1Q14919 205 aaPredicted RBP8.09□□□□□ -1.11
TCF4-216ENST00000562680 KLHL23Q8NBE8 558 aa8.09□□□□□ -1.11
TCF4-216ENST00000562680 TMC2Q8TDI7 906 aa8.09□□□□□ -1.11
TCF4-216ENST00000562680 DHX38Q92620 1227 aaKnown RBP8.09□□□□□ -1.11
TCF4-216ENST00000562680 PNMA5Q96PV4 448 aa8.09□□□□□ -1.11
TCF4-216ENST00000562680 TRIM62Q9BVG3 475 aa8.09□□□□□ -1.11
TCF4-216ENST00000562680 AGPAT3Q9NRZ7 376 aa8.09□□□□□ -1.11
TCF4-216ENST00000562680 SPTLC3Q9NUV7 552 aa8.09□□□□□ -1.11
TCF4-216ENST00000562680 SLC38A7Q9NVC3 462 aa8.09□□□□□ -1.11
TCF4-216ENST00000562680 APEX2Q9UBZ4 518 aa8.09□□□□□ -1.11
TCF4-216ENST00000562680 GOLGA6CA6NDK9 693 aa8.09□□□□□ -1.11
TCF4-216ENST00000562680 GOLGA6BA6NDN3 693 aa8.09□□□□□ -1.11
TCF4-216ENST00000562680 SMIM22K7EJ46 135 aa8.09□□□□□ -1.11
TCF4-216ENST00000562680 PGRMC1O00264 195 aaKnown RBP8.09□□□□□ -1.11
TCF4-216ENST00000562680 KRIT1O00522 736 aa8.09□□□□□ -1.11
TCF4-216ENST00000562680 TEX33O43247 280 aa8.09□□□□□ -1.11
TCF4-216ENST00000562680 GOLGA6DP0CG33 693 aa8.09□□□□□ -1.11
TCF4-216ENST00000562680 MYBP10242 640 aa8.09□□□□□ -1.11
TCF4-216ENST00000562680 NPEPPSP55786 919 aa8.09□□□□□ -1.11
TCF4-216ENST00000562680 TAP1Q03518 808 aa8.09□□□□□ -1.11
TCF4-216ENST00000562680 RUFY4Q6ZNE9 571 aa8.09□□□□□ -1.11
TCF4-216ENST00000562680 ANKRD23Q86SG2 305 aa8.09□□□□□ -1.11
TCF4-216ENST00000562680 RUSC1Q9BVN2 902 aa8.09□□□□□ -1.11
TCF4-216ENST00000562680 GOLGA6AQ9NYA3 693 aa8.09□□□□□ -1.11
TCF4-216ENST00000562680 NPHP3-ACAD11A0A0J9YXS1 232 aa8.09□□□□□ -1.11
TCF4-216ENST00000562680 GTPBP10A4D1E9 387 aaKnown RBP8.09□□□□□ -1.11
TCF4-216ENST00000562680 BUB1O43683 1085 aa8.09□□□□□ -1.11
TCF4-216ENST00000562680 PPFIA4O75335 1185 aa8.09□□□□□ -1.11
TCF4-216ENST00000562680 CLTAP09496 248 aa8.09□□□□□ -1.11
TCF4-216ENST00000562680 MAGEA9P43362 315 aa8.09□□□□□ -1.11
TCF4-216ENST00000562680 RARRES1P49788 294 aa8.09□□□□□ -1.11
TCF4-216ENST00000562680 EFCAB12Q6NXP0 572 aa8.09□□□□□ -1.11
TCF4-216ENST00000562680 TTI2Q6NXR4 508 aa8.09□□□□□ -1.11
TCF4-216ENST00000562680 ERICH1Q86X53 443 aa8.09□□□□□ -1.11
TCF4-216ENST00000562680 DDX55Q8NHQ9 600 aaKnown RBP eCLIP8.09□□□□□ -1.11
TCF4-216ENST00000562680 WNK4Q96J92 1243 aa8.09□□□□□ -1.11
TCF4-216ENST00000562680 GLT1D1Q96MS3 346 aa8.09□□□□□ -1.11
TCF4-216ENST00000562680 CDKN2AIPQ9NXV6 580 aaPredicted RBP8.09□□□□□ -1.11
TCF4-216ENST00000562680 TXNDC16Q9P2K2 825 aa8.09□□□□□ -1.11
TCF4-216ENST00000562680 E7EVH7 732 aa8.08□□□□□ -1.12
TCF4-216ENST00000562680 SART1O43290 800 aaKnown RBP8.08□□□□□ -1.12
TCF4-216ENST00000562680 PSMD10O75832 226 aa8.08□□□□□ -1.12
TCF4-216ENST00000562680 LYPLA2O95372 231 aa8.08□□□□□ -1.12
TCF4-216ENST00000562680 SGSM1Q2NKQ1 1148 aa8.08□□□□□ -1.12
TCF4-216ENST00000562680 ATF7IP2Q5U623 682 aa8.08□□□□□ -1.12
TCF4-216ENST00000562680 RGMBQ6NW40 437 aa8.08□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms