RNA–Protein interactions for RNA: ENST00000562668.1

SMG1-206, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 3

Gene SMG1, Length 449 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-206ENST00000562668 PMS2P1A4D2B8 440 aa6.24□□□□□ -1.41
SMG1-206ENST00000562668 KRT37O76014 449 aa6.24□□□□□ -1.41
SMG1-206ENST00000562668 ZNF202O95125 648 aa6.24□□□□□ -1.41
SMG1-206ENST00000562668 ZBTB48P10074 688 aaPredicted RBP6.24□□□□□ -1.41
SMG1-206ENST00000562668 FNTBP49356 437 aa6.24□□□□□ -1.41
SMG1-206ENST00000562668 DDX53Q86TM3 631 aaKnown RBP6.24□□□□□ -1.41
SMG1-206ENST00000562668 BCL6BQ8N143 479 aaPredicted RBP6.24□□□□□ -1.41
SMG1-206ENST00000562668 LILRB2Q8N423 598 aa6.24□□□□□ -1.41
SMG1-206ENST00000562668 E2F7Q96AV8 911 aa6.24□□□□□ -1.41
SMG1-206ENST00000562668 OSBPL2Q9H1P3 480 aa6.24□□□□□ -1.41
SMG1-206ENST00000562668 TLR9Q9NR96 1032 aa6.24□□□□□ -1.41
SMG1-206ENST00000562668 ING1Q9UK53 422 aaPredicted RBP6.24□□□□□ -1.41
SMG1-206ENST00000562668 VWA7Q9Y334 891 aa6.24□□□□□ -1.41
SMG1-206ENST00000562668 TNS3Q68CZ2 1445 aa6.24□□□□□ -1.41
SMG1-206ENST00000562668 SPATA31A3Q5VYP0 1347 aa6.24□□□□□ -1.41
SMG1-206ENST00000562668 JCADQ9P266 1359 aa6.23□□□□□ -1.41
SMG1-206ENST00000562668 NINLQ9Y2I6 1382 aa6.23□□□□□ -1.41
SMG1-206ENST00000562668 B4E1Z4 1266 aa6.23□□□□□ -1.41
SMG1-206ENST00000562668 M0R2C6 588 aa6.23□□□□□ -1.41
SMG1-206ENST00000562668 GLRX3O76003 335 aaKnown RBP6.23□□□□□ -1.41
SMG1-206ENST00000562668 PRLP01236 227 aa6.23□□□□□ -1.41
SMG1-206ENST00000562668 IGFALSP35858 605 aa6.23□□□□□ -1.41
SMG1-206ENST00000562668 TMF1P82094 1093 aa6.23□□□□□ -1.41
SMG1-206ENST00000562668 ABHD18Q0P651 414 aa6.23□□□□□ -1.41
SMG1-206ENST00000562668 RIN1Q13671 783 aa6.23□□□□□ -1.41
SMG1-206ENST00000562668 GRM7Q14831 915 aa6.23□□□□□ -1.41
SMG1-206ENST00000562668 ARHGAP44Q17R89 818 aa6.23□□□□□ -1.41
SMG1-206ENST00000562668 ZCCHC8Q6NZY4 707 aaKnown RBP6.23□□□□□ -1.41
SMG1-206ENST00000562668 KLHDC10Q6PID8 442 aa6.23□□□□□ -1.41
SMG1-206ENST00000562668 KRT28Q7Z3Y7 464 aa6.23□□□□□ -1.41
SMG1-206ENST00000562668 CHST14Q8NCH0 376 aa6.23□□□□□ -1.41
SMG1-206ENST00000562668 OR5AN1Q8NGI8 311 aa6.23□□□□□ -1.41
SMG1-206ENST00000562668 CSRNP2Q9H175 543 aa6.23□□□□□ -1.41
SMG1-206ENST00000562668 SLC12A5Q9H2X9 1139 aa6.23□□□□□ -1.41
SMG1-206ENST00000562668 CTDP1Q9Y5B0 961 aaPredicted RBP6.23□□□□□ -1.41
SMG1-206ENST00000562668 SLIT3O75094 1523 aa6.23□□□□□ -1.41
SMG1-206ENST00000562668 KIF7Q2M1P5 1343 aa6.23□□□□□ -1.41
SMG1-206ENST00000562668 WASHC2AQ641Q2 1341 aa6.23□□□□□ -1.41
SMG1-206ENST00000562668 BRD4O60885 1362 aaPredicted RBP6.22□□□□□ -1.41
SMG1-206ENST00000562668 ANKRD36BQ8N2N9 1353 aa6.22□□□□□ -1.41
SMG1-206ENST00000562668 C1SP09871 688 aa6.22□□□□□ -1.41
SMG1-206ENST00000562668 KIF11P52732 1056 aa6.22□□□□□ -1.41
SMG1-206ENST00000562668 HHEXQ03014 270 aa6.22□□□□□ -1.41
SMG1-206ENST00000562668 ADAM15Q13444 863 aa6.22□□□□□ -1.41
SMG1-206ENST00000562668 ADGRE4PQ86SQ3 457 aa6.22□□□□□ -1.41
SMG1-206ENST00000562668 C1orf210Q8IVY1 113 aa6.22□□□□□ -1.41
SMG1-206ENST00000562668 D2HGDHQ8N465 521 aa6.22□□□□□ -1.41
SMG1-206ENST00000562668 IL17DQ8TAD2 202 aa6.22□□□□□ -1.41
SMG1-206ENST00000562668 CACTINQ8WUQ7 758 aaKnown RBP6.22□□□□□ -1.41
SMG1-206ENST00000562668 LPPQ93052 612 aa6.22□□□□□ -1.41
SMG1-206ENST00000562668 LRRC59Q96AG4 307 aaKnown RBP6.22□□□□□ -1.41
SMG1-206ENST00000562668 SAMD15Q9P1V8 674 aa6.22□□□□□ -1.41
SMG1-206ENST00000562668 KIF20BQ96Q89 1820 aa6.22□□□□□ -1.41
SMG1-206ENST00000562668 CCDC7Q96M83 1385 aa6.21□□□□□ -1.41
SMG1-206ENST00000562668 ZEB1P37275 1124 aaPredicted RBP6.21□□□□□ -1.42
SMG1-206ENST00000562668 SESN2P58004 480 aaPredicted RBP6.21□□□□□ -1.42
SMG1-206ENST00000562668 DGCR2P98153 550 aa6.21□□□□□ -1.42
SMG1-206ENST00000562668 ROM1Q03395 351 aa6.21□□□□□ -1.42
SMG1-206ENST00000562668 LSM12Q3MHD2 195 aaKnown RBP6.21□□□□□ -1.42
SMG1-206ENST00000562668 FNDC3BQ53EP0 1204 aaKnown RBP6.21□□□□□ -1.42
SMG1-206ENST00000562668 IGFL4Q6B9Z1 124 aa6.21□□□□□ -1.42
SMG1-206ENST00000562668 NGDNQ8NEJ9 315 aaKnown RBP6.21□□□□□ -1.42
SMG1-206ENST00000562668 RABGGTAQ92696 567 aa6.21□□□□□ -1.42
SMG1-206ENST00000562668 SLC7A6OSQ96CW6 309 aaPredicted RBP6.21□□□□□ -1.42
SMG1-206ENST00000562668 TMEM176AQ96HP8 235 aa6.21□□□□□ -1.42
SMG1-206ENST00000562668 DNAJC2Q99543 621 aaKnown RBP6.21□□□□□ -1.42
SMG1-206ENST00000562668 KRTAP9-8Q9BYQ0 159 aa6.21□□□□□ -1.42
SMG1-206ENST00000562668 PCIF1Q9H4Z3 704 aa6.21□□□□□ -1.42
SMG1-206ENST00000562668 AGO3Q9H9G7 860 aaKnown RBP6.21□□□□□ -1.42
SMG1-206ENST00000562668 AURKAIP1Q9NWT8 199 aaPredicted RBP6.21□□□□□ -1.42
SMG1-206ENST00000562668 ANKRD26Q9UPS8 1709 aa6.21□□□□□ -1.42
SMG1-206ENST00000562668 USP19O94966 1318 aa6.21□□□□□ -1.42
SMG1-206ENST00000562668 TTC21BQ7Z4L5 1316 aa6.21□□□□□ -1.42
SMG1-206ENST00000562668 COL18A1P39060 1754 aa6.21□□□□□ -1.42
SMG1-206ENST00000562668 LMO7Q8WWI1 1683 aa6.2□□□□□ -1.42
SMG1-206ENST00000562668 NFAT5O94916 1531 aa6.2□□□□□ -1.42
SMG1-206ENST00000562668 KTN1Q86UP2 1357 aaKnown RBP6.2□□□□□ -1.42
SMG1-206ENST00000562668 NRAPQ86VF7 1730 aa6.2□□□□□ -1.42
SMG1-206ENST00000562668 OVOS2A0A0J9YW53 1432 aa6.2□□□□□ -1.42
SMG1-206ENST00000562668 OVOS2Q6IE36 1432 aa6.2□□□□□ -1.42
SMG1-206ENST00000562668 EDC4Q6P2E9 1401 aaKnown RBP6.2□□□□□ -1.42
SMG1-206ENST00000562668 UBA6A0AVT1 1052 aaPredicted RBP6.2□□□□□ -1.42
SMG1-206ENST00000562668 CAPN14A8MX76 684 aa6.2□□□□□ -1.42
SMG1-206ENST00000562668 PLSCR1O15162 318 aa6.2□□□□□ -1.42
SMG1-206ENST00000562668 DNAJC8O75937 253 aaPredicted RBP6.2□□□□□ -1.42
SMG1-206ENST00000562668 ASLP04424 464 aa6.2□□□□□ -1.42
SMG1-206ENST00000562668 HIBADHP31937 336 aaKnown RBP6.2□□□□□ -1.42
SMG1-206ENST00000562668 RGS3P49796 1198 aa6.2□□□□□ -1.42
SMG1-206ENST00000562668 SLC6A3Q01959 620 aa6.2□□□□□ -1.42
SMG1-206ENST00000562668 FHL2Q14192 279 aa6.2□□□□□ -1.42
SMG1-206ENST00000562668 NFE2L2Q16236 605 aa6.2□□□□□ -1.42
SMG1-206ENST00000562668 SLFN12LQ6IEE8 588 aa6.2□□□□□ -1.42
SMG1-206ENST00000562668 CLUHP3Q96NS8 147 aa6.2□□□□□ -1.42
SMG1-206ENST00000562668 SLITRK6Q9H5Y7 841 aa6.2□□□□□ -1.42
SMG1-206ENST00000562668 ACSS2Q9NR19 701 aa6.2□□□□□ -1.42
SMG1-206ENST00000562668 SAE1Q9UBE0 346 aaPredicted RBP6.2□□□□□ -1.42
SMG1-206ENST00000562668 SPATA31A6Q5VVP1 1343 aa6.2□□□□□ -1.42
SMG1-206ENST00000562668 PLCH1Q4KWH8 1693 aa6.2□□□□□ -1.42
SMG1-206ENST00000562668 ARHGEF10O15013 1369 aa6.19□□□□□ -1.42
SMG1-206ENST00000562668 A0A1W2PRX2 142 aa6.19□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms