RNA–Protein interactions for RNA: ENST00000561947.5

SMG1-205, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5

Gene SMG1, Length 2,664 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-205ENST00000561947 FHDC1Q9C0D6 1143 aaPredicted RBP10.62□□□□□ -0.71
SMG1-205ENST00000561947 COQ4Q9Y3A0 265 aa10.62□□□□□ -0.71
SMG1-205ENST00000561947 UTRNP46939 3433 aa10.62□□□□□ -0.71
SMG1-205ENST00000561947 IGKV6D-21A0A0A0MT36 114 aa10.61□□□□□ -0.71
SMG1-205ENST00000561947 TMCO5BA8MYB1 307 aa10.61□□□□□ -0.71
SMG1-205ENST00000561947 GTF2H1P32780 548 aa10.61□□□□□ -0.71
SMG1-205ENST00000561947 USP37Q86T82 979 aa10.61□□□□□ -0.71
SMG1-205ENST00000561947 ERO1BQ86YB8 467 aa10.61□□□□□ -0.71
SMG1-205ENST00000561947 RFFLQ8WZ73 363 aa10.61□□□□□ -0.71
SMG1-205ENST00000561947 SEMA4DQ92854 862 aa10.61□□□□□ -0.71
SMG1-205ENST00000561947 BICD1Q96G01 975 aa10.61□□□□□ -0.71
SMG1-205ENST00000561947 GOLPH3Q9H4A6 298 aa10.61□□□□□ -0.71
SMG1-205ENST00000561947 DHX33Q9H6R0 707 aaKnown RBP10.61□□□□□ -0.71
SMG1-205ENST00000561947 SEPT11Q9NVA2 429 aaKnown RBP10.61□□□□□ -0.71
SMG1-205ENST00000561947 SPDYE5A6NIY4 337 aa10.61□□□□□ -0.71
SMG1-205ENST00000561947 CXCL11O14625 94 aa10.61□□□□□ -0.71
SMG1-205ENST00000561947 KCNK3O14649 394 aa10.61□□□□□ -0.71
SMG1-205ENST00000561947 CNMDO75829 334 aa10.61□□□□□ -0.71
SMG1-205ENST00000561947 FARP2O94887 1054 aaPredicted RBP10.61□□□□□ -0.71
SMG1-205ENST00000561947 GPC3P51654 580 aa10.61□□□□□ -0.71
SMG1-205ENST00000561947 GPS2Q13227 327 aa10.61□□□□□ -0.71
SMG1-205ENST00000561947 TERF2Q15554 542 aa10.61□□□□□ -0.71
SMG1-205ENST00000561947 GLE1Q53GS7 698 aaKnown RBP10.61□□□□□ -0.71
SMG1-205ENST00000561947 C8orf74Q6P047 294 aa10.61□□□□□ -0.71
SMG1-205ENST00000561947 PEX26Q7Z412 305 aa10.61□□□□□ -0.71
SMG1-205ENST00000561947 ANKRD13AQ8IZ07 590 aa10.61□□□□□ -0.71
SMG1-205ENST00000561947 HDAC7Q8WUI4 952 aa10.61□□□□□ -0.71
SMG1-205ENST00000561947 SLC20A1Q8WUM9 679 aa10.61□□□□□ -0.71
SMG1-205ENST00000561947 CTNNBL1Q8WYA6 563 aaPredicted RBP10.61□□□□□ -0.71
SMG1-205ENST00000561947 KCNN1Q92952 543 aa10.61□□□□□ -0.71
SMG1-205ENST00000561947 KAT5Q92993 513 aa10.61□□□□□ -0.71
SMG1-205ENST00000561947 CLMNQ96JQ2 1002 aa10.61□□□□□ -0.71
SMG1-205ENST00000561947 PAGR1Q9BTK6 254 aa10.61□□□□□ -0.71
SMG1-205ENST00000561947 NIFKQ9BYG3 293 aaKnown RBP10.61□□□□□ -0.71
SMG1-205ENST00000561947 PORCNQ9H237 461 aa10.61□□□□□ -0.71
SMG1-205ENST00000561947 VIPAS39Q9H9C1 493 aa10.61□□□□□ -0.71
SMG1-205ENST00000561947 SUCLA2Q9P2R7 463 aaPredicted RBP10.61□□□□□ -0.71
SMG1-205ENST00000561947 DMGDHQ9UI17 866 aaKnown RBP10.61□□□□□ -0.71
SMG1-205ENST00000561947 STXBP5LQ9Y2K9 1186 aa10.61□□□□□ -0.71
SMG1-205ENST00000561947 GSTTP1A0A1W2PQM5 241 aa10.61□□□□□ -0.71
SMG1-205ENST00000561947 ZBTB48P10074 688 aaPredicted RBP10.61□□□□□ -0.71
SMG1-205ENST00000561947 MYBL2P10244 700 aa10.61□□□□□ -0.71
SMG1-205ENST00000561947 MFAP3P55082 362 aa10.61□□□□□ -0.71
SMG1-205ENST00000561947 DMTNQ08495 405 aa10.61□□□□□ -0.71
SMG1-205ENST00000561947 TMEM132AQ24JP5 1023 aa10.61□□□□□ -0.71
SMG1-205ENST00000561947 PALB2Q86YC2 1186 aa10.61□□□□□ -0.71
SMG1-205ENST00000561947 GSPT2Q8IYD1 628 aaKnown RBP10.61□□□□□ -0.71
SMG1-205ENST00000561947 FAM71AQ8IYT1 594 aa10.61□□□□□ -0.71
SMG1-205ENST00000561947 TMEM143Q96AN5 459 aa10.61□□□□□ -0.71
SMG1-205ENST00000561947 CDCA5Q96FF9 252 aa10.61□□□□□ -0.71
SMG1-205ENST00000561947 KREMEN1Q96MU8 473 aa10.61□□□□□ -0.71
SMG1-205ENST00000561947 POP1Q99575 1024 aaKnown RBP10.61□□□□□ -0.71
SMG1-205ENST00000561947 ASCC2Q9H1I8 757 aaPredicted RBP10.61□□□□□ -0.71
SMG1-205ENST00000561947 PDE11AQ9HCR9 933 aa10.61□□□□□ -0.71
SMG1-205ENST00000561947 TOPORSQ9NS56 1045 aaPredicted RBP10.61□□□□□ -0.71
SMG1-205ENST00000561947 TAS2R14Q9NYV8 317 aa10.61□□□□□ -0.71
SMG1-205ENST00000561947 STIM2Q9P246 746 aa10.61□□□□□ -0.71
SMG1-205ENST00000561947 ANKRD62A6NC57 917 aa10.6□□□□□ -0.71
SMG1-205ENST00000561947 H3BQF6 201 aa10.6□□□□□ -0.71
SMG1-205ENST00000561947 ABCB4P21439 1286 aa10.6□□□□□ -0.71
SMG1-205ENST00000561947 SCP2P22307 547 aa10.6□□□□□ -0.71
SMG1-205ENST00000561947 NF2P35240 595 aa10.6□□□□□ -0.71
SMG1-205ENST00000561947 TNNT3P45378 269 aaPredicted RBP10.6□□□□□ -0.71
SMG1-205ENST00000561947 LIG4P49917 911 aa10.6□□□□□ -0.71
SMG1-205ENST00000561947 NEDD9Q14511 834 aa10.6□□□□□ -0.71
SMG1-205ENST00000561947 DAAM2Q86T65 1068 aa10.6□□□□□ -0.71
SMG1-205ENST00000561947 NT5DC3Q86UY8 548 aa10.6□□□□□ -0.71
SMG1-205ENST00000561947 PPM1KQ8N3J5 372 aa10.6□□□□□ -0.71
SMG1-205ENST00000561947 FBXL13Q8NEE6 735 aa10.6□□□□□ -0.71
SMG1-205ENST00000561947 SLC35G2Q8TBE7 412 aa10.6□□□□□ -0.71
SMG1-205ENST00000561947 ASAP3Q8TDY4 903 aa10.6□□□□□ -0.71
SMG1-205ENST00000561947 SHC3Q92529 594 aa10.6□□□□□ -0.71
SMG1-205ENST00000561947 CEP89Q96ST8 783 aa10.6□□□□□ -0.71
SMG1-205ENST00000561947 PCYT2Q99447 389 aa10.6□□□□□ -0.71
SMG1-205ENST00000561947 FAM213AQ9BRX8 229 aa10.6□□□□□ -0.71
SMG1-205ENST00000561947 ACBD3Q9H3P7 528 aa10.6□□□□□ -0.71
SMG1-205ENST00000561947 OSGEPQ9NPF4 335 aa10.6□□□□□ -0.71
SMG1-205ENST00000561947 AGTPBP1Q9UPW5 1226 aa10.6□□□□□ -0.71
SMG1-205ENST00000561947 KCNH4Q9UQ05 1017 aa10.6□□□□□ -0.71
SMG1-205ENST00000561947 POLR3GO15318 223 aaPredicted RBP10.6□□□□□ -0.71
SMG1-205ENST00000561947 SLC25A27O95847 323 aa10.6□□□□□ -0.71
SMG1-205ENST00000561947 GLRA2P23416 452 aa10.6□□□□□ -0.71
SMG1-205ENST00000561947 TNFRSF8P28908 595 aa10.6□□□□□ -0.71
SMG1-205ENST00000561947 ARL2P36404 184 aa10.6□□□□□ -0.71
SMG1-205ENST00000561947 USP8P40818 1118 aa10.6□□□□□ -0.71
SMG1-205ENST00000561947 NAMPTP43490 491 aa10.6□□□□□ -0.71
SMG1-205ENST00000561947 FAM193AP78312 1265 aa10.6□□□□□ -0.71
SMG1-205ENST00000561947 SLC7A5Q01650 507 aa10.6□□□□□ -0.71
SMG1-205ENST00000561947 STRN3Q13033 797 aa10.6□□□□□ -0.71
SMG1-205ENST00000561947 PPIL2Q13356 520 aa10.6□□□□□ -0.71
SMG1-205ENST00000561947 MOB2Q70IA6 237 aa10.6□□□□□ -0.71
SMG1-205ENST00000561947 DHX30Q7L2E3 1194 aaKnown RBP eCLIP10.6□□□□□ -0.71
SMG1-205ENST00000561947 RPUSD2Q8IZ73 545 aaKnown RBP10.6□□□□□ -0.71
SMG1-205ENST00000561947 USP38Q8NB14 1042 aa10.6□□□□□ -0.71
SMG1-205ENST00000561947 ACTRT1Q8TDG2 376 aa10.6□□□□□ -0.71
SMG1-205ENST00000561947 HELQQ8TDG4 1101 aa10.6□□□□□ -0.71
SMG1-205ENST00000561947 TAS1R2Q8TE23 839 aa10.6□□□□□ -0.71
SMG1-205ENST00000561947 AENQ8WTP8 325 aaKnown RBP10.6□□□□□ -0.71
SMG1-205ENST00000561947 ARHGEF26Q96DR7 871 aa10.6□□□□□ -0.71
SMG1-205ENST00000561947 NT5C1BQ96P26 610 aa10.6□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms