RNA–Protein interactions for RNA: ENST00000561630.1

CDR2-202, Transcript of cerebellar degeneration related protein 2, humanhuman

TSL 5

Gene CDR2, Length 711 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDR2-202ENST00000561630 HACE1Q8IYU2 909 aa26.31■■□□□ 1.8
CDR2-202ENST00000561630 DAW1Q8N136 415 aa26.31■■□□□ 1.8
CDR2-202ENST00000561630 TMEM169Q96HH4 297 aa26.31■■□□□ 1.8
CDR2-202ENST00000561630 NXF3Q9H4D5 531 aaKnown RBP26.31■■□□□ 1.8
CDR2-202ENST00000561630 FOXD4L1Q9NU39 408 aa26.31■■□□□ 1.8
CDR2-202ENST00000561630 DNAJB4Q9UDY4 337 aa26.31■■□□□ 1.8
CDR2-202ENST00000561630 PLXNA4Q9HCM2 1894 aa26.3■■□□□ 1.8
CDR2-202ENST00000561630 ATG2AQ2TAZ0 1938 aa26.3■■□□□ 1.8
CDR2-202ENST00000561630 ARL5CA6NH57 179 aa26.3■■□□□ 1.8
CDR2-202ENST00000561630 TTLL13PA6NNM8 815 aa26.3■■□□□ 1.8
CDR2-202ENST00000561630 B4GALT3O60512 393 aa26.3■■□□□ 1.8
CDR2-202ENST00000561630 NPTXRO95502 500 aa26.3■■□□□ 1.8
CDR2-202ENST00000561630 PRKCBP05771 671 aa26.3■■□□□ 1.8
CDR2-202ENST00000561630 DLX2Q07687 328 aaPredicted RBP26.3■■□□□ 1.8
CDR2-202ENST00000561630 PRPF4BQ13523 1007 aaKnown RBP26.3■■□□□ 1.8
CDR2-202ENST00000561630 TMEM119Q4V9L6 283 aa26.3■■□□□ 1.8
CDR2-202ENST00000561630 PTCRAQ6ISU1 281 aaPredicted RBP26.3■■□□□ 1.8
CDR2-202ENST00000561630 CABP7Q86V35 215 aa26.3■■□□□ 1.8
CDR2-202ENST00000561630 TMEM173Q86WV6 379 aaPredicted RBP26.3■■□□□ 1.8
CDR2-202ENST00000561630 IGSF21Q96ID5 467 aa26.3■■□□□ 1.8
CDR2-202ENST00000561630 CDK5RAP3Q96JB5 506 aa26.3■■□□□ 1.8
CDR2-202ENST00000561630 GAD1Q99259 594 aa26.3■■□□□ 1.8
CDR2-202ENST00000561630 KIFC3Q9BVG8 833 aa26.3■■□□□ 1.8
CDR2-202ENST00000561630 GBP3Q9H0R5 595 aa26.3■■□□□ 1.8
CDR2-202ENST00000561630 ENTPD7Q9NQZ7 604 aa26.3■■□□□ 1.8
CDR2-202ENST00000561630 GIT1Q9Y2X7 761 aa26.3■■□□□ 1.8
CDR2-202ENST00000561630 GRXCR2A6NFK2 248 aa26.29■■□□□ 1.8
CDR2-202ENST00000561630 HIP1RO75146 1068 aa26.29■■□□□ 1.8
CDR2-202ENST00000561630 TBX10O75333 385 aa26.29■■□□□ 1.8
CDR2-202ENST00000561630 DDHD2O94830 711 aa26.29■■□□□ 1.8
CDR2-202ENST00000561630 POMCP01189 267 aa26.29■■□□□ 1.8
CDR2-202ENST00000561630 GUCY2CP25092 1073 aa26.29■■□□□ 1.8
CDR2-202ENST00000561630 MLH1P40692 756 aa26.29■■□□□ 1.8
CDR2-202ENST00000561630 SLC11A1P49279 550 aa26.29■■□□□ 1.8
CDR2-202ENST00000561630 MAPK7Q13164 816 aa26.29■■□□□ 1.8
CDR2-202ENST00000561630 PLPP4Q5VZY2 271 aa26.29■■□□□ 1.8
CDR2-202ENST00000561630 TMC7Q7Z402 723 aa26.29■■□□□ 1.8
CDR2-202ENST00000561630 SYT2Q8N9I0 419 aaPredicted RBP26.29■■□□□ 1.8
CDR2-202ENST00000561630 DRC1Q96MC2 740 aa26.29■■□□□ 1.8
CDR2-202ENST00000561630 PLIN2Q99541 437 aa26.29■■□□□ 1.8
CDR2-202ENST00000561630 CDCA3Q99618 268 aaPredicted RBP26.29■■□□□ 1.8
CDR2-202ENST00000561630 TIPINQ9BVW5 301 aa26.29■■□□□ 1.8
CDR2-202ENST00000561630 PDZD7Q9H5P4 517 aa26.29■■□□□ 1.8
CDR2-202ENST00000561630 MTMR6Q9Y217 621 aa26.29■■□□□ 1.8
CDR2-202ENST00000561630 FSD2A1L4K1 749 aa26.28■■□□□ 1.8
CDR2-202ENST00000561630 N4BP3O15049 544 aa26.28■■□□□ 1.8
CDR2-202ENST00000561630 PER2O15055 1255 aa26.28■■□□□ 1.8
CDR2-202ENST00000561630 LONP1P36776 959 aaKnown RBP26.28■■□□□ 1.8
CDR2-202ENST00000561630 UBA7P41226 1012 aa26.28■■□□□ 1.8
CDR2-202ENST00000561630 NPTX2P47972 431 aa26.28■■□□□ 1.8
CDR2-202ENST00000561630 DUSP6Q16828 381 aa26.28■■□□□ 1.8
CDR2-202ENST00000561630 BCL7CQ8WUZ0 217 aaPredicted RBP26.28■■□□□ 1.8
CDR2-202ENST00000561630 FAM193BQ96PV7 902 aaPredicted RBP26.28■■□□□ 1.8
CDR2-202ENST00000561630 TMEM175Q9BSA9 504 aa26.28■■□□□ 1.8
CDR2-202ENST00000561630 APOL6Q9BWW8 343 aa26.28■■□□□ 1.8
CDR2-202ENST00000561630 CLIC4Q9Y696 253 aa26.28■■□□□ 1.8
CDR2-202ENST00000561630 HIDE1A8MVS5 230 aa26.27■■□□□ 1.8
CDR2-202ENST00000561630 EDN1P05305 212 aa26.27■■□□□ 1.8
CDR2-202ENST00000561630 PLA2G4BP0C869 781 aa26.27■■□□□ 1.8
CDR2-202ENST00000561630 LIG1P18858 919 aa26.27■■□□□ 1.8
CDR2-202ENST00000561630 NDUFV1P49821 464 aa26.27■■□□□ 1.8
CDR2-202ENST00000561630 SLC12A3P55017 1021 aa26.27■■□□□ 1.8
CDR2-202ENST00000561630 PEX3P56589 373 aa26.27■■□□□ 1.8
CDR2-202ENST00000561630 GRIN1Q05586 938 aa26.27■■□□□ 1.8
CDR2-202ENST00000561630 DMP1Q13316 513 aaPredicted RBP26.27■■□□□ 1.8
CDR2-202ENST00000561630 PTPAQ15257 358 aa26.27■■□□□ 1.8
CDR2-202ENST00000561630 DDX53Q86TM3 631 aaKnown RBP26.27■■□□□ 1.8
CDR2-202ENST00000561630 ZFP42Q96MM3 310 aa26.27■■□□□ 1.8
CDR2-202ENST00000561630 C17orf75Q9HAS0 396 aa26.27■■□□□ 1.8
CDR2-202ENST00000561630 KCND2Q9NZV8 630 aa26.27■■□□□ 1.8
CDR2-202ENST00000561630 DAXXQ9UER7 740 aaPredicted RBP26.27■■□□□ 1.8
CDR2-202ENST00000561630 USP20Q9Y2K6 914 aa26.27■■□□□ 1.8
CDR2-202ENST00000561630 ZMYM2Q9UBW7 1377 aa26.27■■□□□ 1.8
CDR2-202ENST00000561630 CCDC169A6NNP5 214 aa26.26■■□□□ 1.79
CDR2-202ENST00000561630 STX6O43752 255 aa26.26■■□□□ 1.79
CDR2-202ENST00000561630 ALDH2P05091 517 aa26.26■■□□□ 1.79
CDR2-202ENST00000561630 SSBP05455 408 aaKnown RBP eCLIP26.26■■□□□ 1.79
CDR2-202ENST00000561630 IL9P15248 144 aa26.26■■□□□ 1.79
CDR2-202ENST00000561630 AKAP5P24588 427 aa26.26■■□□□ 1.79
CDR2-202ENST00000561630 SMC1AQ14683 1233 aaKnown RBP26.26■■□□□ 1.79
CDR2-202ENST00000561630 TMEM132AQ24JP5 1023 aa26.26■■□□□ 1.79
CDR2-202ENST00000561630 FAM173BQ6P4H8 233 aa26.26■■□□□ 1.79
CDR2-202ENST00000561630 MRPL43Q8N983 215 aaKnown RBP26.26■■□□□ 1.79
CDR2-202ENST00000561630 CALML4Q96GE6 196 aa26.26■■□□□ 1.79
CDR2-202ENST00000561630 MSLNLQ96KJ4 702 aa26.26■■□□□ 1.79
CDR2-202ENST00000561630 MIOSQ9NXC5 875 aa26.26■■□□□ 1.79
CDR2-202ENST00000561630 CLEC1BQ9P126 229 aa26.26■■□□□ 1.79
CDR2-202ENST00000561630 FAM50BQ9Y247 325 aa26.26■■□□□ 1.79
CDR2-202ENST00000561630 K7ERI5 159 aa26.25■■□□□ 1.79
CDR2-202ENST00000561630 GLP2RO95838 553 aa26.25■■□□□ 1.79
CDR2-202ENST00000561630 SCNN1GP51170 649 aa26.25■■□□□ 1.79
CDR2-202ENST00000561630 DSC1Q08554 894 aa26.25■■□□□ 1.79
CDR2-202ENST00000561630 NT5DC1Q5TFE4 455 aa26.25■■□□□ 1.79
CDR2-202ENST00000561630 VPS52Q8N1B4 723 aa26.25■■□□□ 1.79
CDR2-202ENST00000561630 GSTCDQ8NEC7 633 aa26.25■■□□□ 1.79
CDR2-202ENST00000561630 ZSCAN16Q9H4T2 348 aaPredicted RBP26.25■■□□□ 1.79
CDR2-202ENST00000561630 ARHGAP28Q9P2N2 729 aa26.25■■□□□ 1.79
CDR2-202ENST00000561630 RBM19Q9Y4C8 960 aaKnown RBP26.25■■□□□ 1.79
CDR2-202ENST00000561630 C2orf71A6NGG8 1288 aa26.24■■□□□ 1.79
CDR2-202ENST00000561630 BMS1Q14692 1282 aaKnown RBP26.24■■□□□ 1.79
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms