RNA–Protein interactions for RNA: ENST00000561557.1

LINC00566-201, long intergenic non-protein coding RNA 566, humanhuman

TSL 1 (best) BASIC

Gene LINC00566, Length 570 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00566-201ENST00000561557 CHMP5Q9NZZ3 219 aa10.58□□□□□ -0.72
LINC00566-201ENST00000561557 USP25Q9UHP3 1055 aa10.58□□□□□ -0.72
LINC00566-201ENST00000561557 PIN4Q9Y237 131 aaKnown RBP10.58□□□□□ -0.72
LINC00566-201ENST00000561557 ARIH1Q9Y4X5 557 aaPredicted RBP10.58□□□□□ -0.72
LINC00566-201ENST00000561557 TCHHQ07283 1943 aa10.58□□□□□ -0.72
LINC00566-201ENST00000561557 A0A1W2PQ27 194 aa10.57□□□□□ -0.72
LINC00566-201ENST00000561557 A0A1W2PQ64 194 aa10.57□□□□□ -0.72
LINC00566-201ENST00000561557 A0A1W2PQD8 194 aa10.57□□□□□ -0.72
LINC00566-201ENST00000561557 CCDC169A6NNP5 214 aa10.57□□□□□ -0.72
LINC00566-201ENST00000561557 K7ERI5 159 aa10.57□□□□□ -0.72
LINC00566-201ENST00000561557 TSPAN1O60635 241 aa10.57□□□□□ -0.72
LINC00566-201ENST00000561557 DGKIO75912 1065 aa10.57□□□□□ -0.72
LINC00566-201ENST00000561557 UPP2O95045 317 aa10.57□□□□□ -0.72
LINC00566-201ENST00000561557 KRT18P05783 430 aaKnown RBP10.57□□□□□ -0.72
LINC00566-201ENST00000561557 MAPTP10636 758 aaKnown RBP10.57□□□□□ -0.72
LINC00566-201ENST00000561557 HOXA11P31270 313 aaPredicted RBP10.57□□□□□ -0.72
LINC00566-201ENST00000561557 ZNF131P52739 623 aa10.57□□□□□ -0.72
LINC00566-201ENST00000561557 PEX3P56589 373 aa10.57□□□□□ -0.72
LINC00566-201ENST00000561557 GIT2Q14161 759 aa10.57□□□□□ -0.72
LINC00566-201ENST00000561557 DHX8Q14562 1220 aaKnown RBP10.57□□□□□ -0.72
LINC00566-201ENST00000561557 AMHR2Q16671 573 aa10.57□□□□□ -0.72
LINC00566-201ENST00000561557 CSPP1Q1MSJ5 1256 aa10.57□□□□□ -0.72
LINC00566-201ENST00000561557 APBB1IPQ7Z5R6 666 aaPredicted RBP10.57□□□□□ -0.72
LINC00566-201ENST00000561557 CMTR2Q8IYT2 770 aaKnown RBP10.57□□□□□ -0.72
LINC00566-201ENST00000561557 LRRC15Q8TF66 581 aa10.57□□□□□ -0.72
LINC00566-201ENST00000561557 SAMD11Q96NU1 681 aa10.57□□□□□ -0.72
LINC00566-201ENST00000561557 YME1L1Q96TA2 773 aa10.57□□□□□ -0.72
LINC00566-201ENST00000561557 PANK2Q9BZ23 570 aa10.57□□□□□ -0.72
LINC00566-201ENST00000561557 TNMDQ9H2S6 317 aa10.57□□□□□ -0.72
LINC00566-201ENST00000561557 NKX2-4Q9H2Z4 354 aa10.57□□□□□ -0.72
LINC00566-201ENST00000561557 SEMA6BQ9H3T3 888 aa10.57□□□□□ -0.72
LINC00566-201ENST00000561557 ZNF576Q9H609 170 aa10.57□□□□□ -0.72
LINC00566-201ENST00000561557 PARVGQ9HBI0 331 aa10.57□□□□□ -0.72
LINC00566-201ENST00000561557 UBN1Q9NPG3 1134 aa10.57□□□□□ -0.72
LINC00566-201ENST00000561557 FAM105AQ9NUU6 356 aa10.57□□□□□ -0.72
LINC00566-201ENST00000561557 KBTBD4Q9NVX7 518 aa10.57□□□□□ -0.72
LINC00566-201ENST00000561557 ARHGAP28Q9P2N2 729 aa10.57□□□□□ -0.72
LINC00566-201ENST00000561557 SEL1LQ9UBV2 794 aa10.57□□□□□ -0.72
LINC00566-201ENST00000561557 YBX2Q9Y2T7 364 aaKnown RBP10.57□□□□□ -0.72
LINC00566-201ENST00000561557 RWDD3Q9Y3V2 267 aa10.57□□□□□ -0.72
LINC00566-201ENST00000561557 A0A087X0B3 334 aa10.56□□□□□ -0.72
LINC00566-201ENST00000561557 FAM237AA0A1B0GTK4 181 aa10.56□□□□□ -0.72
LINC00566-201ENST00000561557 A0A1B0GUA9 196 aa10.56□□□□□ -0.72
LINC00566-201ENST00000561557 CARNS1A5YM72 827 aa10.56□□□□□ -0.72
LINC00566-201ENST00000561557 N4BP3O15049 544 aa10.56□□□□□ -0.72
LINC00566-201ENST00000561557 POLR2DO15514 142 aaKnown RBP10.56□□□□□ -0.72
LINC00566-201ENST00000561557 TBCAO75347 108 aaKnown RBP10.56□□□□□ -0.72
LINC00566-201ENST00000561557 FAM13AO94988 1023 aa10.56□□□□□ -0.72
LINC00566-201ENST00000561557 PRKCBP05771 671 aa10.56□□□□□ -0.72
LINC00566-201ENST00000561557 CA3P07451 260 aa10.56□□□□□ -0.72
LINC00566-201ENST00000561557 GAP43P17677 238 aa10.56□□□□□ -0.72
LINC00566-201ENST00000561557 PRPF4BQ13523 1007 aaKnown RBP10.56□□□□□ -0.72
LINC00566-201ENST00000561557 PPP2R2DQ66LE6 453 aa10.56□□□□□ -0.72
LINC00566-201ENST00000561557 FAM117BQ6P1L5 589 aa10.56□□□□□ -0.72
LINC00566-201ENST00000561557 CNNM4Q6P4Q7 775 aa10.56□□□□□ -0.72
LINC00566-201ENST00000561557 SLC27A1Q6PCB7 646 aa10.56□□□□□ -0.72
LINC00566-201ENST00000561557 MRPL10Q7Z7H8 261 aaKnown RBP10.56□□□□□ -0.72
LINC00566-201ENST00000561557 ZNF598Q86UK7 904 aaKnown RBP10.56□□□□□ -0.72
LINC00566-201ENST00000561557 HACE1Q8IYU2 909 aa10.56□□□□□ -0.72
LINC00566-201ENST00000561557 MYCT1Q8N699 235 aa10.56□□□□□ -0.72
LINC00566-201ENST00000561557 PDILTQ8N807 584 aa10.56□□□□□ -0.72
LINC00566-201ENST00000561557 DDX12PQ92771 950 aa10.56□□□□□ -0.72
LINC00566-201ENST00000561557 REEP2Q9BRK0 252 aa10.56□□□□□ -0.72
LINC00566-201ENST00000561557 CCDC113Q9H0I3 377 aa10.56□□□□□ -0.72
LINC00566-201ENST00000561557 RC3H2Q9HBD1 1191 aaKnown RBP10.56□□□□□ -0.72
LINC00566-201ENST00000561557 KCNH3Q9ULD8 1083 aa10.56□□□□□ -0.72
LINC00566-201ENST00000561557 COL4A6Q14031 1691 aa10.56□□□□□ -0.72
LINC00566-201ENST00000561557 PTPRSQ13332 1948 aa10.56□□□□□ -0.72
LINC00566-201ENST00000561557 MYH11P35749 1972 aa10.56□□□□□ -0.72
LINC00566-201ENST00000561557 NPHP3-ACAD11A0A0J9YXS1 232 aa10.55□□□□□ -0.72
LINC00566-201ENST00000561557 LINC01553A4QN01 128 aa10.55□□□□□ -0.72
LINC00566-201ENST00000561557 MYMKA6NI61 221 aa10.55□□□□□ -0.72
LINC00566-201ENST00000561557 SFI1A8K8P3 1242 aa10.55□□□□□ -0.72
LINC00566-201ENST00000561557 TRAK2O60296 914 aa10.55□□□□□ -0.72
LINC00566-201ENST00000561557 MYOGP15173 224 aa10.55□□□□□ -0.72
LINC00566-201ENST00000561557 ARF4P18085 180 aaPredicted RBP10.55□□□□□ -0.72
LINC00566-201ENST00000561557 NCKAP1LP55160 1127 aa10.55□□□□□ -0.72
LINC00566-201ENST00000561557 ERVK-21P61565 698 aa10.55□□□□□ -0.72
LINC00566-201ENST00000561557 TAP1Q03518 808 aa10.55□□□□□ -0.72
LINC00566-201ENST00000561557 RAD51AP2Q09MP3 1159 aa10.55□□□□□ -0.72
LINC00566-201ENST00000561557 STRN3Q13033 797 aa10.55□□□□□ -0.72
LINC00566-201ENST00000561557 BTG3Q14201 252 aaPredicted RBP10.55□□□□□ -0.72
LINC00566-201ENST00000561557 UBXN11Q5T124 520 aa10.55□□□□□ -0.72
LINC00566-201ENST00000561557 TMCO2Q7Z6W1 182 aaPredicted RBP10.55□□□□□ -0.72
LINC00566-201ENST00000561557 CEP57L1Q8IYX8 460 aa10.55□□□□□ -0.72
LINC00566-201ENST00000561557 FIBCD1Q8N539 461 aa10.55□□□□□ -0.72
LINC00566-201ENST00000561557 DEFB123Q8N688 67 aa10.55□□□□□ -0.72
LINC00566-201ENST00000561557 TMEM161BQ8NDZ6 487 aa10.55□□□□□ -0.72
LINC00566-201ENST00000561557 CLP1Q92989 425 aaKnown RBP10.55□□□□□ -0.72
LINC00566-201ENST00000561557 DHX58Q96C10 678 aa10.55□□□□□ -0.72
LINC00566-201ENST00000561557 DNAJC19Q96DA6 116 aa10.55□□□□□ -0.72
LINC00566-201ENST00000561557 TGS1Q96RS0 853 aaKnown RBP10.55□□□□□ -0.72
LINC00566-201ENST00000561557 C7orf25Q9BPX7 421 aa10.55□□□□□ -0.72
LINC00566-201ENST00000561557 ADPGKQ9BRR6 497 aa10.55□□□□□ -0.72
LINC00566-201ENST00000561557 MRPL4Q9BYD3 311 aaKnown RBP10.55□□□□□ -0.72
LINC00566-201ENST00000561557 TMEM117Q9H0C3 514 aa10.55□□□□□ -0.72
LINC00566-201ENST00000561557 ST6GALNAC4Q9H4F1 302 aa10.55□□□□□ -0.72
LINC00566-201ENST00000561557 POLD4Q9HCU8 107 aa10.55□□□□□ -0.72
LINC00566-201ENST00000561557 TSR3Q9UJK0 312 aaKnown RBP10.55□□□□□ -0.72
LINC00566-201ENST00000561557 HPSEQ9Y251 543 aa10.55□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms