RNA–Protein interactions for RNA: ENST00000561436.1

HERC1-215, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 4

Gene HERC1, Length 551 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-215ENST00000561436 XPAP23025 273 aaPredicted RBP4.83□□□□□ -1.64
HERC1-215ENST00000561436 POLD1P28340 1107 aa4.83□□□□□ -1.64
HERC1-215ENST00000561436 MANFP55145 182 aaKnown RBP4.83□□□□□ -1.64
HERC1-215ENST00000561436 MOGSQ13724 837 aa4.83□□□□□ -1.64
HERC1-215ENST00000561436 SPIDRQ14159 915 aa4.83□□□□□ -1.64
HERC1-215ENST00000561436 ICAM4Q14773 271 aa4.83□□□□□ -1.64
HERC1-215ENST00000561436 RNF151Q2KHN1 245 aa4.83□□□□□ -1.64
HERC1-215ENST00000561436 INAVAQ3KP66 663 aa4.83□□□□□ -1.64
HERC1-215ENST00000561436 TMEM240Q5SV17 173 aa4.83□□□□□ -1.64
HERC1-215ENST00000561436 KANK2Q63ZY3 851 aa4.83□□□□□ -1.64
HERC1-215ENST00000561436 ARHGEF18Q6ZSZ5 1173 aa4.83□□□□□ -1.64
HERC1-215ENST00000561436 CBARPQ8N350 705 aaPredicted RBP4.83□□□□□ -1.64
HERC1-215ENST00000561436 TGFBRAP1Q8WUH2 860 aa4.83□□□□□ -1.64
HERC1-215ENST00000561436 KATNBL1Q9H079 304 aa4.83□□□□□ -1.64
HERC1-215ENST00000561436 CDH19Q9H159 772 aa4.83□□□□□ -1.64
HERC1-215ENST00000561436 OR10A5Q9H207 317 aa4.83□□□□□ -1.64
HERC1-215ENST00000561436 IP6K2Q9UHH9 426 aa4.83□□□□□ -1.64
HERC1-215ENST00000561436 ANKRD6Q9Y2G4 727 aa4.83□□□□□ -1.64
HERC1-215ENST00000561436 GPR45Q9Y5Y3 372 aa4.83□□□□□ -1.64
HERC1-215ENST00000561436 KIF14Q15058 1648 aa4.83□□□□□ -1.64
HERC1-215ENST00000561436 CAMSAP1Q5T5Y3 1602 aa4.83□□□□□ -1.64
HERC1-215ENST00000561436 ABCC1P33527 1531 aa4.82□□□□□ -1.64
HERC1-215ENST00000561436 GPATCH8Q9UKJ3 1502 aaKnown RBP4.82□□□□□ -1.64
HERC1-215ENST00000561436 FAM135BQ49AJ0 1406 aa4.82□□□□□ -1.64
HERC1-215ENST00000561436 NPEPPSL1A6NEC2 478 aa4.82□□□□□ -1.64
HERC1-215ENST00000561436 IL33O95760 270 aa4.82□□□□□ -1.64
HERC1-215ENST00000561436 CHGBP05060 677 aa4.82□□□□□ -1.64
HERC1-215ENST00000561436 ZSCAN20P17040 1043 aaPredicted RBP4.82□□□□□ -1.64
HERC1-215ENST00000561436 NRG3P56975 720 aa4.82□□□□□ -1.64
HERC1-215ENST00000561436 PPP2CBP62714 309 aa4.82□□□□□ -1.64
HERC1-215ENST00000561436 PPP2CAP67775 309 aa4.82□□□□□ -1.64
HERC1-215ENST00000561436 MRPS9P82933 396 aaKnown RBP4.82□□□□□ -1.64
HERC1-215ENST00000561436 USP10Q14694 798 aaKnown RBP4.82□□□□□ -1.64
HERC1-215ENST00000561436 PDCD1Q15116 288 aa4.82□□□□□ -1.64
HERC1-215ENST00000561436 CT83Q5H943 113 aa4.82□□□□□ -1.64
HERC1-215ENST00000561436 CXXC5Q7LFL8 322 aaKnown RBP4.82□□□□□ -1.64
HERC1-215ENST00000561436 ABCF1Q8NE71 845 aaKnown RBP eCLIP4.82□□□□□ -1.64
HERC1-215ENST00000561436 AUTS2Q8WXX7 1259 aa4.82□□□□□ -1.64
HERC1-215ENST00000561436 AJUBAQ96IF1 538 aa4.82□□□□□ -1.64
HERC1-215ENST00000561436 PAWRQ96IZ0 340 aaKnown RBP4.82□□□□□ -1.64
HERC1-215ENST00000561436 HIST1H2AHQ96KK5 128 aa4.82□□□□□ -1.64
HERC1-215ENST00000561436 HIST1H2AJQ99878 128 aa4.82□□□□□ -1.64
HERC1-215ENST00000561436 DPYSL5Q9BPU6 564 aa4.82□□□□□ -1.64
HERC1-215ENST00000561436 KRTAP4-9Q9BYQ8 210 aa4.82□□□□□ -1.64
HERC1-215ENST00000561436 QRSL1Q9H0R6 528 aaKnown RBP4.82□□□□□ -1.64
HERC1-215ENST00000561436 CSRNP2Q9H175 543 aa4.82□□□□□ -1.64
HERC1-215ENST00000561436 SEMA4AQ9H3S1 761 aa4.82□□□□□ -1.64
HERC1-215ENST00000561436 KCMF1Q9P0J7 381 aa4.82□□□□□ -1.64
HERC1-215ENST00000561436 FBXO10Q9UK96 956 aa4.82□□□□□ -1.64
HERC1-215ENST00000561436 FAM184BQ9ULE4 1060 aa4.82□□□□□ -1.64
HERC1-215ENST00000561436 PNMA8BQ9ULN7 279 aaPredicted RBP4.82□□□□□ -1.64
HERC1-215ENST00000561436 PPP2R3BQ9Y5P8 575 aa4.82□□□□□ -1.64
HERC1-215ENST00000561436 NUMBLQ9Y6R0 609 aa4.82□□□□□ -1.64
HERC1-215ENST00000561436 NPHP4O75161 1426 aaPredicted RBP4.81□□□□□ -1.64
HERC1-215ENST00000561436 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP4.81□□□□□ -1.64
HERC1-215ENST00000561436 KIF3BO15066 747 aa4.81□□□□□ -1.64
HERC1-215ENST00000561436 H2AFYO75367 372 aaKnown RBP4.81□□□□□ -1.64
HERC1-215ENST00000561436 RFPL1O75677 317 aa4.81□□□□□ -1.64
HERC1-215ENST00000561436 ABLIM3O94929 683 aa4.81□□□□□ -1.64
HERC1-215ENST00000561436 CLEC2LP0C7M8 214 aa4.81□□□□□ -1.64
HERC1-215ENST00000561436 ATF3P18847 181 aa4.81□□□□□ -1.64
HERC1-215ENST00000561436 GPR3P46089 330 aa4.81□□□□□ -1.64
HERC1-215ENST00000561436 GPR15P49685 360 aa4.81□□□□□ -1.64
HERC1-215ENST00000561436 SLC16A1P53985 500 aa4.81□□□□□ -1.64
HERC1-215ENST00000561436 MYBPC3Q14896 1274 aa4.81□□□□□ -1.64
HERC1-215ENST00000561436 PCOLCEQ15113 449 aa4.81□□□□□ -1.64
HERC1-215ENST00000561436 PCBP2Q15366 365 aaKnown RBP eCLIP4.81□□□□□ -1.64
HERC1-215ENST00000561436 STILQ15468 1287 aa4.81□□□□□ -1.64
HERC1-215ENST00000561436 CCDC178Q5BJE1 867 aa4.81□□□□□ -1.64
HERC1-215ENST00000561436 TOR2AQ5JU69 321 aa4.81□□□□□ -1.64
HERC1-215ENST00000561436 CXorf57Q6NSI4 855 aaKnown RBP4.81□□□□□ -1.64
HERC1-215ENST00000561436 GLB1LQ6UWU2 654 aa4.81□□□□□ -1.64
HERC1-215ENST00000561436 KANSL1Q7Z3B3 1105 aa4.81□□□□□ -1.64
HERC1-215ENST00000561436 BCL6BQ8N143 479 aaPredicted RBP4.81□□□□□ -1.64
HERC1-215ENST00000561436 MYO1HQ8N1T3 1032 aa4.81□□□□□ -1.64
HERC1-215ENST00000561436 CDYL2Q8N8U2 506 aa4.81□□□□□ -1.64
HERC1-215ENST00000561436 OR14K1Q8NGZ2 314 aa4.81□□□□□ -1.64
HERC1-215ENST00000561436 OR14C36Q8NHC7 312 aa4.81□□□□□ -1.64
HERC1-215ENST00000561436 JPH3Q8WXH2 748 aaPredicted RBP4.81□□□□□ -1.64
HERC1-215ENST00000561436 EAF2Q96CJ1 260 aaPredicted RBP4.81□□□□□ -1.64
HERC1-215ENST00000561436 C8orf48Q96LL4 319 aa4.81□□□□□ -1.64
HERC1-215ENST00000561436 ORAI2Q96SN7 254 aa4.81□□□□□ -1.64
HERC1-215ENST00000561436 NUP88Q99567 741 aaPredicted RBP4.81□□□□□ -1.64
HERC1-215ENST00000561436 CARD11Q9BXL7 1154 aa4.81□□□□□ -1.64
HERC1-215ENST00000561436 KRTAP9-3Q9BYQ3 159 aa4.81□□□□□ -1.64
HERC1-215ENST00000561436 MTG2Q9H4K7 406 aa4.81□□□□□ -1.64
HERC1-215ENST00000561436 TCF7L1Q9HCS4 588 aa4.81□□□□□ -1.64
HERC1-215ENST00000561436 SMPD4Q9NXE4 827 aa4.81□□□□□ -1.64
HERC1-215ENST00000561436 SAP30BPQ9UHR5 308 aaKnown RBP4.81□□□□□ -1.64
HERC1-215ENST00000561436 PCDHB6Q9Y5E3 794 aa4.81□□□□□ -1.64
HERC1-215ENST00000561436 PZPP20742 1482 aa4.81□□□□□ -1.64
HERC1-215ENST00000561436 MTUS2Q5JR59 1369 aa4.8□□□□□ -1.64
HERC1-215ENST00000561436 MYPNQ86TC9 1320 aa4.8□□□□□ -1.64
HERC1-215ENST00000561436 PRSS38A1L453 326 aa4.8□□□□□ -1.64
HERC1-215ENST00000561436 MATN2O00339 956 aa4.8□□□□□ -1.64
HERC1-215ENST00000561436 MAFO75444 373 aaPredicted RBP4.8□□□□□ -1.64
HERC1-215ENST00000561436 PCDH8O95206 1070 aa4.8□□□□□ -1.64
HERC1-215ENST00000561436 PF4V1P10720 104 aa4.8□□□□□ -1.64
HERC1-215ENST00000561436 CYP2C19P33261 490 aa4.8□□□□□ -1.64
HERC1-215ENST00000561436 ETV4P43268 484 aa4.8□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms