RNA–Protein interactions for RNA: ENST00000561395.5

TPM1-231, Transcript of tropomyosin 1, humanhuman

TSL 5

Gene TPM1, Length 673 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-231ENST00000561395 CETN3O15182 167 aa8.24□□□□□ -1.09
TPM1-231ENST00000561395 NKRFO15226 690 aaKnown RBP eCLIP8.24□□□□□ -1.09
TPM1-231ENST00000561395 SLC16A3O15427 465 aaKnown RBP8.24□□□□□ -1.09
TPM1-231ENST00000561395 TGFB1I1O43294 461 aa8.24□□□□□ -1.09
TPM1-231ENST00000561395 ZNF500O60304 480 aaPredicted RBP8.24□□□□□ -1.09
TPM1-231ENST00000561395 SNAI1O95863 264 aaPredicted RBP8.24□□□□□ -1.09
TPM1-231ENST00000561395 FGBP02675 491 aa8.24□□□□□ -1.09
TPM1-231ENST00000561395 NR3C1P04150 777 aa8.24□□□□□ -1.09
TPM1-231ENST00000561395 ZNF865P0CJ78 1059 aaPredicted RBP8.24□□□□□ -1.09
TPM1-231ENST00000561395 NR2F2P24468 414 aa8.24□□□□□ -1.09
TPM1-231ENST00000561395 CYP2C18P33260 490 aa8.24□□□□□ -1.09
TPM1-231ENST00000561395 DNM2P50570 870 aa8.24□□□□□ -1.09
TPM1-231ENST00000561395 CDK7P50613 346 aa8.24□□□□□ -1.09
TPM1-231ENST00000561395 STAT5BP51692 787 aa8.24□□□□□ -1.09
TPM1-231ENST00000561395 ARHGAP1Q07960 439 aa8.24□□□□□ -1.09
TPM1-231ENST00000561395 KCNA1Q09470 495 aa8.24□□□□□ -1.09
TPM1-231ENST00000561395 DMP1Q13316 513 aaPredicted RBP8.24□□□□□ -1.09
TPM1-231ENST00000561395 TRIM14Q14142 442 aa8.24□□□□□ -1.09
TPM1-231ENST00000561395 EMC2Q15006 297 aa8.24□□□□□ -1.09
TPM1-231ENST00000561395 KCNA10Q16322 511 aa8.24□□□□□ -1.09
TPM1-231ENST00000561395 MAN2A1Q16706 1144 aa8.24□□□□□ -1.09
TPM1-231ENST00000561395 HSDL1Q3SXM5 330 aa8.24□□□□□ -1.09
TPM1-231ENST00000561395 MTERF2Q49AM1 385 aa8.24□□□□□ -1.09
TPM1-231ENST00000561395 CCDC40Q4G0X9 1142 aa8.24□□□□□ -1.09
TPM1-231ENST00000561395 TMEM63BQ5T3F8 832 aa8.24□□□□□ -1.09
TPM1-231ENST00000561395 FAM102BQ5T8I3 360 aa8.24□□□□□ -1.09
TPM1-231ENST00000561395 CEP135Q66GS9 1140 aa8.24□□□□□ -1.09
TPM1-231ENST00000561395 PLPPR4Q7Z2D5 763 aa8.24□□□□□ -1.09
TPM1-231ENST00000561395 TRMT1LQ7Z2T5 733 aaKnown RBP8.24□□□□□ -1.09
TPM1-231ENST00000561395 CREBRFQ8IUR6 639 aa8.24□□□□□ -1.09
TPM1-231ENST00000561395 FAM126BQ8IXS8 530 aa8.24□□□□□ -1.09
TPM1-231ENST00000561395 MSL3Q8N5Y2 521 aaKnown RBP8.24□□□□□ -1.09
TPM1-231ENST00000561395 KLHDC9Q8NEP7 349 aa8.24□□□□□ -1.09
TPM1-231ENST00000561395 GOLGA5Q8TBA6 731 aa8.24□□□□□ -1.09
TPM1-231ENST00000561395 SPIRE2Q8WWL2 714 aa8.24□□□□□ -1.09
TPM1-231ENST00000561395 COPS5Q92905 334 aa8.24□□□□□ -1.09
TPM1-231ENST00000561395 EMID1Q96A84 441 aaPredicted RBP8.24□□□□□ -1.09
TPM1-231ENST00000561395 HVCN1Q96D96 273 aa8.24□□□□□ -1.09
TPM1-231ENST00000561395 FAM167AQ96KS9 214 aa8.24□□□□□ -1.09
TPM1-231ENST00000561395 FBXL18Q96ME1 805 aa8.24□□□□□ -1.09
TPM1-231ENST00000561395 GLT1D1Q96MS3 346 aa8.24□□□□□ -1.09
TPM1-231ENST00000561395 SPATA33Q96N06 139 aa8.24□□□□□ -1.09
TPM1-231ENST00000561395 CEP89Q96ST8 783 aa8.24□□□□□ -1.09
TPM1-231ENST00000561395 TINF2Q9BSI4 451 aa8.24□□□□□ -1.09
TPM1-231ENST00000561395 NOC4LQ9BVI4 516 aaKnown RBP8.24□□□□□ -1.09
TPM1-231ENST00000561395 NIFKQ9BYG3 293 aaKnown RBP8.24□□□□□ -1.09
TPM1-231ENST00000561395 AZI2Q9H6S1 392 aa8.24□□□□□ -1.09
TPM1-231ENST00000561395 C17orf75Q9HAS0 396 aa8.24□□□□□ -1.09
TPM1-231ENST00000561395 XPNPEP1Q9NQW7 623 aa8.24□□□□□ -1.09
TPM1-231ENST00000561395 PPME1Q9Y570 386 aa8.24□□□□□ -1.09
TPM1-231ENST00000561395 PCDHA11Q9Y5I1 949 aa8.24□□□□□ -1.09
TPM1-231ENST00000561395 A0A0U1RQG5 324 aaPredicted RBP8.23□□□□□ -1.09
TPM1-231ENST00000561395 MYADML2A6NDP7 307 aa8.23□□□□□ -1.09
TPM1-231ENST00000561395 EPOPA6NHQ4 379 aa8.23□□□□□ -1.09
TPM1-231ENST00000561395 AKR1B15C9JRZ8 316 aaPredicted RBP8.23□□□□□ -1.09
TPM1-231ENST00000561395 PES1O00541 588 aaKnown RBP8.23□□□□□ -1.09
TPM1-231ENST00000561395 TLR3O15455 904 aaKnown RBP8.23□□□□□ -1.09
TPM1-231ENST00000561395 MFAP3LO75121 409 aa8.23□□□□□ -1.09
TPM1-231ENST00000561395 GH1P01241 217 aa8.23□□□□□ -1.09
TPM1-231ENST00000561395 GYPCP04921 128 aa8.23□□□□□ -1.09
TPM1-231ENST00000561395 RPL13P26373 211 aaKnown RBP8.23□□□□□ -1.09
TPM1-231ENST00000561395 RFC5P40937 340 aa8.23□□□□□ -1.09
TPM1-231ENST00000561395 NPTX2P47972 431 aa8.23□□□□□ -1.09
TPM1-231ENST00000561395 SLC26A2P50443 739 aa8.23□□□□□ -1.09
TPM1-231ENST00000561395 SMTNP53814 917 aa8.23□□□□□ -1.09
TPM1-231ENST00000561395 POLGP54098 1239 aaPredicted RBP8.23□□□□□ -1.09
TPM1-231ENST00000561395 PEX3P56589 373 aa8.23□□□□□ -1.09
TPM1-231ENST00000561395 GTF2BQ00403 316 aa8.23□□□□□ -1.09
TPM1-231ENST00000561395 ADAM9Q13443 819 aa8.23□□□□□ -1.09
TPM1-231ENST00000561395 LAMC2Q13753 1193 aa8.23□□□□□ -1.09
TPM1-231ENST00000561395 TARBP2Q15633 366 aaKnown RBP8.23□□□□□ -1.09
TPM1-231ENST00000561395 VWA3BQ502W6 1294 aa8.23□□□□□ -1.09
TPM1-231ENST00000561395 CCSAPQ6IQ19 270 aaPredicted RBP8.23□□□□□ -1.09
TPM1-231ENST00000561395 HS2ST1Q7LGA3 356 aa8.23□□□□□ -1.09
TPM1-231ENST00000561395 HAUS6Q7Z4H7 955 aa8.23□□□□□ -1.09
TPM1-231ENST00000561395 PPFIBP1Q86W92 1011 aa8.23□□□□□ -1.09
TPM1-231ENST00000561395 TRIM50Q86XT4 487 aa8.23□□□□□ -1.09
TPM1-231ENST00000561395 KSR1Q8IVT5 923 aa8.23□□□□□ -1.09
TPM1-231ENST00000561395 TRIM59Q8IWR1 403 aa8.23□□□□□ -1.09
TPM1-231ENST00000561395 TC2NQ8N9U0 490 aa8.23□□□□□ -1.09
TPM1-231ENST00000561395 TMEM161BQ8NDZ6 487 aa8.23□□□□□ -1.09
TPM1-231ENST00000561395 CCDC112Q8NEF3 446 aa8.23□□□□□ -1.09
TPM1-231ENST00000561395 PPTC7Q8NI37 304 aa8.23□□□□□ -1.09
TPM1-231ENST00000561395 KIAA1524Q8TCG1 905 aa8.23□□□□□ -1.09
TPM1-231ENST00000561395 ATP8B4Q8TF62 1192 aa8.23□□□□□ -1.09
TPM1-231ENST00000561395 TMEM174Q8WUU8 243 aa8.23□□□□□ -1.09
TPM1-231ENST00000561395 BSNDQ8WZ55 320 aa8.23□□□□□ -1.09
TPM1-231ENST00000561395 ACCSQ96QU6 501 aa8.23□□□□□ -1.09
TPM1-231ENST00000561395 ERGIC2Q96RQ1 377 aa8.23□□□□□ -1.09
TPM1-231ENST00000561395 GBP3Q9H0R5 595 aa8.23□□□□□ -1.09
TPM1-231ENST00000561395 POLR3FQ9H1D9 316 aaPredicted RBP8.23□□□□□ -1.09
TPM1-231ENST00000561395 KCNH6Q9H252 994 aa8.23□□□□□ -1.09
TPM1-231ENST00000561395 IKZF4Q9H2S9 585 aa8.23□□□□□ -1.09
TPM1-231ENST00000561395 NDST4Q9H3R1 872 aa8.23□□□□□ -1.09
TPM1-231ENST00000561395 DHX33Q9H6R0 707 aaKnown RBP8.23□□□□□ -1.09
TPM1-231ENST00000561395 CERS4Q9HA82 394 aa8.23□□□□□ -1.09
TPM1-231ENST00000561395 AGPAT3Q9NRZ7 376 aa8.23□□□□□ -1.09
TPM1-231ENST00000561395 NRBP2Q9NSY0 501 aa8.23□□□□□ -1.09
TPM1-231ENST00000561395 CGNQ9P2M7 1197 aaKnown RBP8.23□□□□□ -1.09
TPM1-231ENST00000561395 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP8.23□□□□□ -1.094e-7■■■□□ 19.1
Retrieved 100 of 20,778 RNA–protein pairs in 173.1 ms