RNA–Protein interactions for RNA: ENST00000561266.5

TPM1-230, Transcript of tropomyosin 1, humanhuman

TSL 3

Gene TPM1, Length 671 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-230ENST00000561266 TIPINQ9BVW5 301 aa15.32■□□□□ 0.04
TPM1-230ENST00000561266 TARS2Q9BW92 718 aaKnown RBP15.32■□□□□ 0.04
TPM1-230ENST00000561266 APOL6Q9BWW8 343 aa15.32■□□□□ 0.04
TPM1-230ENST00000561266 IKZF4Q9H2S9 585 aa15.32■□□□□ 0.04
TPM1-230ENST00000561266 TMEM134Q9H6X4 195 aa15.32■□□□□ 0.04
TPM1-230ENST00000561266 GDPD2Q9HCC8 539 aa15.32■□□□□ 0.04
TPM1-230ENST00000561266 STK17AQ9UEE5 414 aa15.32■□□□□ 0.04
TPM1-230ENST00000561266 CCDC39Q9UFE4 941 aa15.32■□□□□ 0.04
TPM1-230ENST00000561266 PLAGL2Q9UPG8 496 aa15.32■□□□□ 0.04
TPM1-230ENST00000561266 INPP5FQ9Y2H2 1132 aa15.32■□□□□ 0.04
TPM1-230ENST00000561266 K7ERI5 159 aa15.31■□□□□ 0.04
TPM1-230ENST00000561266 DDHD2O94830 711 aa15.31■□□□□ 0.04
TPM1-230ENST00000561266 CSPG5O95196 566 aa15.31■□□□□ 0.04
TPM1-230ENST00000561266 MAPTP10636 758 aaKnown RBP15.31■□□□□ 0.04
TPM1-230ENST00000561266 NMT1P30419 496 aaKnown RBP15.31■□□□□ 0.04
TPM1-230ENST00000561266 ME1P48163 572 aa15.31■□□□□ 0.04
TPM1-230ENST00000561266 RAB27AP51159 221 aa15.31■□□□□ 0.04
TPM1-230ENST00000561266 NCKAP1LP55160 1127 aa15.31■□□□□ 0.04
TPM1-230ENST00000561266 DMP1Q13316 513 aaPredicted RBP15.31■□□□□ 0.04
TPM1-230ENST00000561266 RESP18Q5W5W9 173 aa15.31■□□□□ 0.04
TPM1-230ENST00000561266 SLC27A1Q6PCB7 646 aa15.31■□□□□ 0.04
TPM1-230ENST00000561266 TMEM173Q86WV6 379 aaPredicted RBP15.31■□□□□ 0.04
TPM1-230ENST00000561266 GSTCDQ8NEC7 633 aa15.31■□□□□ 0.04
TPM1-230ENST00000561266 SPPL3Q8TCT6 385 aa15.31■□□□□ 0.04
TPM1-230ENST00000561266 KCNG4Q8TDN1 519 aa15.31■□□□□ 0.04
TPM1-230ENST00000561266 SPIRE2Q8WWL2 714 aa15.31■□□□□ 0.04
TPM1-230ENST00000561266 DDX12PQ92771 950 aa15.31■□□□□ 0.04
TPM1-230ENST00000561266 ZFP42Q96MM3 310 aa15.31■□□□□ 0.04
TPM1-230ENST00000561266 SAMD11Q96NU1 681 aa15.31■□□□□ 0.04
TPM1-230ENST00000561266 GAD1Q99259 594 aa15.31■□□□□ 0.04
TPM1-230ENST00000561266 ACO2Q99798 780 aaKnown RBP15.31■□□□□ 0.04
TPM1-230ENST00000561266 FGFBP2Q9BYJ0 223 aa15.31■□□□□ 0.04
TPM1-230ENST00000561266 HAPLN2Q9GZV7 340 aa15.31■□□□□ 0.04
TPM1-230ENST00000561266 NRDE2Q9H7Z3 1164 aa15.31■□□□□ 0.04
TPM1-230ENST00000561266 PTPRHQ9HD43 1115 aa15.31■□□□□ 0.04
TPM1-230ENST00000561266 TBC1D13Q9NVG8 400 aa15.31■□□□□ 0.04
TPM1-230ENST00000561266 KCND2Q9NZV8 630 aa15.31■□□□□ 0.04
TPM1-230ENST00000561266 KLK14Q9P0G3 267 aa15.31■□□□□ 0.04
TPM1-230ENST00000561266 DNAJB4Q9UDY4 337 aa15.31■□□□□ 0.04
TPM1-230ENST00000561266 CFAP45Q9UL16 551 aa15.31■□□□□ 0.04
TPM1-230ENST00000561266 ODF2LQ9ULJ1 636 aa15.31■□□□□ 0.04
TPM1-230ENST00000561266 PCDHGC5Q9Y5F6 944 aa15.31■□□□□ 0.04
TPM1-230ENST00000561266 SPTBN5Q9NRC6 3674 aaKnown RBP15.3■□□□□ 0.04
TPM1-230ENST00000561266 NT5C1B-RDH14C9J2C7 533 aa15.3■□□□□ 0.04
TPM1-230ENST00000561266 MEFVO15553 781 aaPredicted RBP15.3■□□□□ 0.04
TPM1-230ENST00000561266 RB1P06400 928 aa15.3■□□□□ 0.04
TPM1-230ENST00000561266 SKIP12755 728 aa15.3■□□□□ 0.04
TPM1-230ENST00000561266 ITGA4P13612 1032 aa15.3■□□□□ 0.04
TPM1-230ENST00000561266 CASP1P29466 404 aa15.3■□□□□ 0.04
TPM1-230ENST00000561266 IRS1P35568 1242 aa15.3■□□□□ 0.04
TPM1-230ENST00000561266 STAT6P42226 847 aa15.3■□□□□ 0.04
TPM1-230ENST00000561266 EFNA5P52803 228 aa15.3■□□□□ 0.04
TPM1-230ENST00000561266 NOMO2Q5JPE7 1267 aa15.3■□□□□ 0.04
TPM1-230ENST00000561266 PHLPP2Q6ZVD8 1323 aa15.3■□□□□ 0.04
TPM1-230ENST00000561266 MYCT1Q8N699 235 aa15.3■□□□□ 0.04
TPM1-230ENST00000561266 CEP120Q8N960 986 aa15.3■□□□□ 0.04
TPM1-230ENST00000561266 BCL7CQ8WUZ0 217 aaPredicted RBP15.3■□□□□ 0.04
TPM1-230ENST00000561266 DHX58Q96C10 678 aa15.3■□□□□ 0.04
TPM1-230ENST00000561266 CCDC51Q96ER9 411 aa15.3■□□□□ 0.04
TPM1-230ENST00000561266 RSAD1Q9HA92 442 aa15.3■□□□□ 0.04
TPM1-230ENST00000561266 C17orf75Q9HAS0 396 aa15.3■□□□□ 0.04
TPM1-230ENST00000561266 SNTG2Q9NY99 539 aa15.3■□□□□ 0.04
TPM1-230ENST00000561266 ARL5CA6NH57 179 aa15.29■□□□□ 0.04
TPM1-230ENST00000561266 HOXA2O43364 376 aa15.29■□□□□ 0.04
TPM1-230ENST00000561266 FAM13AO94988 1023 aa15.29■□□□□ 0.04
TPM1-230ENST00000561266 POMCP01189 267 aa15.29■□□□□ 0.04
TPM1-230ENST00000561266 TXLNAP40222 546 aa15.29■□□□□ 0.04
TPM1-230ENST00000561266 MLH1P40692 756 aa15.29■□□□□ 0.04
TPM1-230ENST00000561266 ZC2HC1CQ53FD0 456 aaPredicted RBP15.29■□□□□ 0.04
TPM1-230ENST00000561266 SPOUT1Q5T280 376 aaKnown RBP15.29■□□□□ 0.04
TPM1-230ENST00000561266 ATF7IP2Q5U623 682 aa15.29■□□□□ 0.04
TPM1-230ENST00000561266 KCNT2Q6UVM3 1135 aa15.29■□□□□ 0.04
TPM1-230ENST00000561266 CCDC73Q6ZRK6 1079 aa15.29■□□□□ 0.04
TPM1-230ENST00000561266 SV2BQ7L1I2 683 aa15.29■□□□□ 0.04
TPM1-230ENST00000561266 HAUS6Q7Z4H7 955 aa15.29■□□□□ 0.04
TPM1-230ENST00000561266 SFR1Q86XK3 245 aa15.29■□□□□ 0.04
TPM1-230ENST00000561266 ABI1Q8IZP0 508 aa15.29■□□□□ 0.04
TPM1-230ENST00000561266 LRRC43Q8N309 656 aa15.29■□□□□ 0.04
TPM1-230ENST00000561266 PGBD4Q96DM1 585 aa15.29■□□□□ 0.04
TPM1-230ENST00000561266 CDT1Q9H211 546 aa15.29■□□□□ 0.04
TPM1-230ENST00000561266 ZHX3Q9H4I2 956 aa15.29■□□□□ 0.04
TPM1-230ENST00000561266 CACNG4Q9UBN1 327 aa15.29■□□□□ 0.04
TPM1-230ENST00000561266 TNFSF13BQ9Y275 285 aa15.29■□□□□ 0.04
TPM1-230ENST00000561266 UNC80Q8N2C7 3258 aa15.29■□□□□ 0.04
TPM1-230ENST00000561266 CITO14578 2027 aa15.29■□□□□ 0.04
TPM1-230ENST00000561266 A0A1B0GVL5 298 aa15.28■□□□□ 0.04
TPM1-230ENST00000561266 F8W810 466 aa15.28■□□□□ 0.04
TPM1-230ENST00000561266 N4BP3O15049 544 aa15.28■□□□□ 0.04
TPM1-230ENST00000561266 INPPL1O15357 1258 aa15.28■□□□□ 0.04
TPM1-230ENST00000561266 POLR2DO15514 142 aaKnown RBP15.28■□□□□ 0.04
TPM1-230ENST00000561266 FGF18O76093 207 aa15.28■□□□□ 0.04
TPM1-230ENST00000561266 KRT18P05783 430 aaKnown RBP15.28■□□□□ 0.04
TPM1-230ENST00000561266 PROZP22891 400 aa15.28■□□□□ 0.04
TPM1-230ENST00000561266 SLC11A1P49279 550 aa15.28■□□□□ 0.04
TPM1-230ENST00000561266 SCNN1GP51170 649 aa15.28■□□□□ 0.04
TPM1-230ENST00000561266 BCAR1P56945 870 aa15.28■□□□□ 0.04
TPM1-230ENST00000561266 KRT85P78386 507 aa15.28■□□□□ 0.04
TPM1-230ENST00000561266 TPRNQ4KMQ1 711 aa15.28■□□□□ 0.04
TPM1-230ENST00000561266 SLC39A4Q6P5W5 647 aa15.28■□□□□ 0.04
TPM1-230ENST00000561266 GLB1LQ6UWU2 654 aa15.28■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 93.4 ms