RNA–Protein interactions for RNA: ENST00000561065.1

LMX1B-204, Transcript of LIM homeobox transcription factor 1 beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LMX1B, Length 1,300 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1B-204ENST00000561065 VPS52Q8N1B4 723 aa17.7■□□□□ 0.42
LMX1B-204ENST00000561065 ERMNQ8TAM6 284 aa17.7■□□□□ 0.42
LMX1B-204ENST00000561065 URGCPQ8TCY9 931 aa17.7■□□□□ 0.42
LMX1B-204ENST00000561065 ZFP42Q96MM3 310 aa17.7■□□□□ 0.42
LMX1B-204ENST00000561065 NACC1Q96RE7 527 aa17.7■□□□□ 0.42
LMX1B-204ENST00000561065 S1PR5Q9H228 398 aa17.7■□□□□ 0.42
LMX1B-204ENST00000561065 MARCH5Q9NX47 278 aa17.7■□□□□ 0.42
LMX1B-204ENST00000561065 FSD2A1L4K1 749 aa17.69■□□□□ 0.42
LMX1B-204ENST00000561065 PP2D1A8MPX8 630 aa17.69■□□□□ 0.42
LMX1B-204ENST00000561065 CLASP2O75122 1294 aaKnown RBP17.69■□□□□ 0.42
LMX1B-204ENST00000561065 ITGA4P13612 1032 aa17.69■□□□□ 0.42
LMX1B-204ENST00000561065 PTGDRQ13258 359 aa17.69■□□□□ 0.42
LMX1B-204ENST00000561065 TMEM31Q5JXX7 168 aa17.69■□□□□ 0.42
LMX1B-204ENST00000561065 LARP1BQ659C4 914 aaKnown RBP17.69■□□□□ 0.42
LMX1B-204ENST00000561065 HAUS3Q68CZ6 603 aa17.69■□□□□ 0.42
LMX1B-204ENST00000561065 PADI6Q6TGC4 694 aa17.69■□□□□ 0.42
LMX1B-204ENST00000561065 DDX53Q86TM3 631 aaKnown RBP17.69■□□□□ 0.42
LMX1B-204ENST00000561065 IGSF22Q8N9C0 903 aa17.69■□□□□ 0.42
LMX1B-204ENST00000561065 MCPH1Q8NEM0 835 aa17.69■□□□□ 0.42
LMX1B-204ENST00000561065 FEZF2Q8TBJ5 459 aa17.69■□□□□ 0.42
LMX1B-204ENST00000561065 GAD1Q99259 594 aa17.69■□□□□ 0.42
LMX1B-204ENST00000561065 APOL5Q9BWW9 433 aa17.69■□□□□ 0.42
LMX1B-204ENST00000561065 MIOSQ9NXC5 875 aa17.69■□□□□ 0.42
LMX1B-204ENST00000561065 C2orf16Q68DN1 1984 aa17.68■□□□□ 0.42
LMX1B-204ENST00000561065 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP17.68■□□□□ 0.42
LMX1B-204ENST00000561065 ARL5CA6NH57 179 aa17.68■□□□□ 0.42
LMX1B-204ENST00000561065 F8W810 466 aa17.68■□□□□ 0.42
LMX1B-204ENST00000561065 LAD1O00515 517 aa17.68■□□□□ 0.42
LMX1B-204ENST00000561065 DCXO43602 365 aa17.68■□□□□ 0.42
LMX1B-204ENST00000561065 GPR37L1O60883 481 aa17.68■□□□□ 0.42
LMX1B-204ENST00000561065 NPTXRO95502 500 aa17.68■□□□□ 0.42
LMX1B-204ENST00000561065 CTSAP10619 480 aa17.68■□□□□ 0.42
LMX1B-204ENST00000561065 CYP11B2P19099 503 aa17.68■□□□□ 0.42
LMX1B-204ENST00000561065 GJB2P29033 226 aa17.68■□□□□ 0.42
LMX1B-204ENST00000561065 CCT6AP40227 531 aaKnown RBP17.68■□□□□ 0.42
LMX1B-204ENST00000561065 SCNN1GP51170 649 aa17.68■□□□□ 0.42
LMX1B-204ENST00000561065 DSC1Q08554 894 aa17.68■□□□□ 0.42
LMX1B-204ENST00000561065 PTPN14Q15678 1187 aa17.68■□□□□ 0.42
LMX1B-204ENST00000561065 RILPL1Q5EBL4 403 aa17.68■□□□□ 0.42
LMX1B-204ENST00000561065 PPP4R3CPQ6ZMV5 832 aa17.68■□□□□ 0.42
LMX1B-204ENST00000561065 GSTCDQ8NEC7 633 aa17.68■□□□□ 0.42
LMX1B-204ENST00000561065 POP1Q99575 1024 aaKnown RBP17.68■□□□□ 0.42
LMX1B-204ENST00000561065 KIFC3Q9BVG8 833 aa17.68■□□□□ 0.42
LMX1B-204ENST00000561065 APOL6Q9BWW8 343 aa17.68■□□□□ 0.42
LMX1B-204ENST00000561065 CCDC113Q9H0I3 377 aa17.68■□□□□ 0.42
LMX1B-204ENST00000561065 POLD4Q9HCU8 107 aa17.68■□□□□ 0.42
LMX1B-204ENST00000561065 EIF4ENIF1Q9NRA8 985 aaKnown RBP17.68■□□□□ 0.42
LMX1B-204ENST00000561065 MUTYHQ9UIF7 546 aa17.68■□□□□ 0.42
LMX1B-204ENST00000561065 USP20Q9Y2K6 914 aa17.68■□□□□ 0.42
LMX1B-204ENST00000561065 TECTAO75443 2155 aa17.67■□□□□ 0.42
LMX1B-204ENST00000561065 A0A1B0GUA9 196 aa17.67■□□□□ 0.42
LMX1B-204ENST00000561065 ARHGEF35A5YM69 484 aa17.67■□□□□ 0.42
LMX1B-204ENST00000561065 LOC730098B7Z3J9 87 aa17.67■□□□□ 0.42
LMX1B-204ENST00000561065 NRP1O14786 923 aa17.67■□□□□ 0.42
LMX1B-204ENST00000561065 CA8P35219 290 aa17.67■□□□□ 0.42
LMX1B-204ENST00000561065 RNF135Q8IUD6 432 aa17.67■□□□□ 0.42
LMX1B-204ENST00000561065 COLGALT2Q8IYK4 626 aa17.67■□□□□ 0.42
LMX1B-204ENST00000561065 CNNM3Q8NE01 707 aa17.67■□□□□ 0.42
LMX1B-204ENST00000561065 SNX29Q8TEQ0 813 aa17.67■□□□□ 0.42
LMX1B-204ENST00000561065 TMEM175Q9BSA9 504 aa17.67■□□□□ 0.42
LMX1B-204ENST00000561065 BHMT2Q9H2M3 363 aa17.67■□□□□ 0.42
LMX1B-204ENST00000561065 FZD8Q9H461 694 aa17.67■□□□□ 0.42
LMX1B-204ENST00000561065 LRWD1Q9UFC0 647 aa17.67■□□□□ 0.42
LMX1B-204ENST00000561065 IRAK3Q9Y616 596 aa17.67■□□□□ 0.42
LMX1B-204ENST00000561065 TRIP11Q15643 1979 aa17.66■□□□□ 0.42
LMX1B-204ENST00000561065 CXCL14O95715 111 aa17.66■□□□□ 0.42
LMX1B-204ENST00000561065 MUTP22033 750 aa17.66■□□□□ 0.42
LMX1B-204ENST00000561065 AKAP5P24588 427 aa17.66■□□□□ 0.42
LMX1B-204ENST00000561065 CDC25AP30304 524 aa17.66■□□□□ 0.42
LMX1B-204ENST00000561065 CBX2Q14781 532 aaPredicted RBP17.66■□□□□ 0.42
LMX1B-204ENST00000561065 FAM187BQ17R55 369 aa17.66■□□□□ 0.42
LMX1B-204ENST00000561065 SLC27A1Q6PCB7 646 aa17.66■□□□□ 0.42
LMX1B-204ENST00000561065 KCNK18Q7Z418 384 aa17.66■□□□□ 0.42
LMX1B-204ENST00000561065 RNF168Q8IYW5 571 aaPredicted RBP17.66■□□□□ 0.42
LMX1B-204ENST00000561065 MMTAG2Q9BU76 263 aaKnown RBP17.66■□□□□ 0.42
LMX1B-204ENST00000561065 PDZD7Q9H5P4 517 aa17.66■□□□□ 0.42
LMX1B-204ENST00000561065 DDX19AQ9NUU7 478 aaKnown RBP17.66■□□□□ 0.42
LMX1B-204ENST00000561065 PRMT7Q9NVM4 692 aaPredicted RBP17.66■□□□□ 0.42
LMX1B-204ENST00000561065 KIAA1024Q9UPX6 916 aa17.66■□□□□ 0.42
LMX1B-204ENST00000561065 PRG3Q9Y2Y8 225 aaPredicted RBP17.66■□□□□ 0.42
LMX1B-204ENST00000561065 MYH11P35749 1972 aa17.65■□□□□ 0.42
LMX1B-204ENST00000561065 EFEMP2O95967 443 aa17.65■□□□□ 0.42
LMX1B-204ENST00000561065 SRGAP2BP0DMP2 458 aa17.65■□□□□ 0.42
LMX1B-204ENST00000561065 EPCAMP16422 314 aa17.65■□□□□ 0.42
LMX1B-204ENST00000561065 NAMPTP43490 491 aa17.65■□□□□ 0.42
LMX1B-204ENST00000561065 PDIA5Q14554 519 aa17.65■□□□□ 0.42
LMX1B-204ENST00000561065 CASP10Q92851 521 aa17.65■□□□□ 0.42
LMX1B-204ENST00000561065 PRIMPOLQ96LW4 560 aa17.65■□□□□ 0.42
LMX1B-204ENST00000561065 PHF7Q9BWX1 381 aaPredicted RBP17.65■□□□□ 0.42
LMX1B-204ENST00000561065 TRIM6Q9C030 488 aaPredicted RBP17.65■□□□□ 0.42
LMX1B-204ENST00000561065 CXCL16Q9H2A7 254 aa17.65■□□□□ 0.42
LMX1B-204ENST00000561065 UBN1Q9NPG3 1134 aa17.65■□□□□ 0.42
LMX1B-204ENST00000561065 KANSL3Q9P2N6 904 aa17.65■□□□□ 0.42
LMX1B-204ENST00000561065 CACNG4Q9UBN1 327 aa17.65■□□□□ 0.42
LMX1B-204ENST00000561065 GIT1Q9Y2X7 761 aa17.65■□□□□ 0.42
LMX1B-204ENST00000561065 ZMYM2Q9UBW7 1377 aa17.64■□□□□ 0.41
LMX1B-204ENST00000561065 CARNS1A5YM72 827 aa17.64■□□□□ 0.41
LMX1B-204ENST00000561065 E9PMD0 336 aa17.64■□□□□ 0.41
LMX1B-204ENST00000561065 LILRB3O75022 631 aa17.64■□□□□ 0.41
LMX1B-204ENST00000561065 SSBP05455 408 aaKnown RBP eCLIP17.64■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms