RNA–Protein interactions for RNA: ENST00000560861.1

SNX1-212, Transcript of sorting nexin 1, humanhuman

TSL 3

Gene SNX1, Length 850 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-212ENST00000560861 MFSD14AQ96MC6 490 aa12.33□□□□□ -0.44
SNX1-212ENST00000560861 NLRP4Q96MN2 994 aa12.33□□□□□ -0.44
SNX1-212ENST00000560861 MAP7D2Q96T17 732 aa12.33□□□□□ -0.44
SNX1-212ENST00000560861 ACO2Q99798 780 aaKnown RBP12.33□□□□□ -0.44
SNX1-212ENST00000560861 FDXACB1Q9BRP7 624 aaPredicted RBP12.33□□□□□ -0.44
SNX1-212ENST00000560861 MRPL4Q9BYD3 311 aaKnown RBP12.33□□□□□ -0.44
SNX1-212ENST00000560861 PTPRHQ9HD43 1115 aa12.33□□□□□ -0.44
SNX1-212ENST00000560861 GTF2IRD1Q9UHL9 959 aa12.33□□□□□ -0.44
SNX1-212ENST00000560861 PTPN22Q9Y2R2 807 aa12.33□□□□□ -0.44
SNX1-212ENST00000560861 TRIM17Q9Y577 477 aa12.33□□□□□ -0.44
SNX1-212ENST00000560861 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP12.33□□□□□ -0.44
SNX1-212ENST00000560861 GTPBP10A4D1E9 387 aaKnown RBP12.32□□□□□ -0.44
SNX1-212ENST00000560861 GOLGA8IPA6NC78 632 aa12.32□□□□□ -0.44
SNX1-212ENST00000560861 GOLGA8JA6NMD2 632 aa12.32□□□□□ -0.44
SNX1-212ENST00000560861 ZEB2O60315 1214 aa12.32□□□□□ -0.44
SNX1-212ENST00000560861 GPR32O75388 356 aa12.32□□□□□ -0.44
SNX1-212ENST00000560861 AFPP02771 609 aaKnown RBP12.32□□□□□ -0.44
SNX1-212ENST00000560861 TPM2P07951 284 aa12.32□□□□□ -0.44
SNX1-212ENST00000560861 CYP2C9P11712 490 aa12.32□□□□□ -0.44
SNX1-212ENST00000560861 LIG4P49917 911 aa12.32□□□□□ -0.44
SNX1-212ENST00000560861 FXR1P51114 621 aaKnown RBP eCLIP12.32□□□□□ -0.44
SNX1-212ENST00000560861 RBL2Q08999 1139 aa12.32□□□□□ -0.44
SNX1-212ENST00000560861 GOLGA8FQ08AF8 430 aa12.32□□□□□ -0.44
SNX1-212ENST00000560861 GOLGA8DPQ0D2H9 430 aa12.32□□□□□ -0.44
SNX1-212ENST00000560861 LRMPQ12912 555 aa12.32□□□□□ -0.44
SNX1-212ENST00000560861 BFSP1Q12934 665 aa12.32□□□□□ -0.44
SNX1-212ENST00000560861 TRIM14Q14142 442 aa12.32□□□□□ -0.44
SNX1-212ENST00000560861 KCNA10Q16322 511 aa12.32□□□□□ -0.44
SNX1-212ENST00000560861 MAPK6Q16659 721 aa12.32□□□□□ -0.44
SNX1-212ENST00000560861 NBPF20Q3BBV1 942 aa12.32□□□□□ -0.44
SNX1-212ENST00000560861 FKBP15Q5T1M5 1219 aa12.32□□□□□ -0.44
SNX1-212ENST00000560861 SLFN12LQ6IEE8 588 aa12.32□□□□□ -0.44
SNX1-212ENST00000560861 CRELD2Q6UXH1 353 aaPredicted RBP12.32□□□□□ -0.44
SNX1-212ENST00000560861 TSHZ1Q6ZSZ6 1077 aa12.32□□□□□ -0.44
SNX1-212ENST00000560861 INTS8Q75QN2 995 aaKnown RBP12.32□□□□□ -0.44
SNX1-212ENST00000560861 SRGAP1Q7Z6B7 1085 aa12.32□□□□□ -0.44
SNX1-212ENST00000560861 TMEM139Q8IV31 216 aa12.32□□□□□ -0.44
SNX1-212ENST00000560861 GPD1LQ8N335 351 aa12.32□□□□□ -0.44
SNX1-212ENST00000560861 CCDC155Q8N6L0 562 aa12.32□□□□□ -0.44
SNX1-212ENST00000560861 TMC2Q8TDI7 906 aa12.32□□□□□ -0.44
SNX1-212ENST00000560861 SAAL1Q96ER3 474 aa12.32□□□□□ -0.44
SNX1-212ENST00000560861 ZNF668Q96K58 619 aaPredicted RBP12.32□□□□□ -0.44
SNX1-212ENST00000560861 ZNF830Q96NB3 372 aaPredicted RBP12.32□□□□□ -0.44
SNX1-212ENST00000560861 TMX1Q9H3N1 280 aa12.32□□□□□ -0.44
SNX1-212ENST00000560861 AKT3Q9Y243 479 aa12.32□□□□□ -0.44
SNX1-212ENST00000560861 TNFSF13BQ9Y275 285 aa12.32□□□□□ -0.44
SNX1-212ENST00000560861 FRMD4BQ9Y2L6 1034 aa12.32□□□□□ -0.44
SNX1-212ENST00000560861 ZKSCAN5Q9Y2L8 839 aa12.32□□□□□ -0.44
SNX1-212ENST00000560861 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP12.32□□□□□ -0.448e-7■■■□□ 14.6
SNX1-212ENST00000560861 CNTNAP2Q9UHC6 1331 aa12.32□□□□□ -0.44
SNX1-212ENST00000560861 CENPFP49454 3210 aa12.31□□□□□ -0.44
SNX1-212ENST00000560861 EPHB6O15197 1021 aa12.31□□□□□ -0.44
SNX1-212ENST00000560861 PMM2O15305 246 aa12.31□□□□□ -0.44
SNX1-212ENST00000560861 B4GALT5O43286 388 aa12.31□□□□□ -0.44
SNX1-212ENST00000560861 EXTL3O43909 919 aa12.31□□□□□ -0.44
SNX1-212ENST00000560861 MFAP3LO75121 409 aa12.31□□□□□ -0.44
SNX1-212ENST00000560861 TOM1L1O75674 476 aa12.31□□□□□ -0.44
SNX1-212ENST00000560861 NOL4O94818 638 aa12.31□□□□□ -0.44
SNX1-212ENST00000560861 ASGR1P07306 291 aa12.31□□□□□ -0.44
SNX1-212ENST00000560861 DLG4P78352 724 aa12.31□□□□□ -0.44
SNX1-212ENST00000560861 MCL1Q07820 350 aa12.31□□□□□ -0.44
SNX1-212ENST00000560861 CYP24A1Q07973 514 aa12.31□□□□□ -0.44
SNX1-212ENST00000560861 SNRNP35Q16560 246 aaKnown RBP12.31□□□□□ -0.44
SNX1-212ENST00000560861 EEF1DP3Q658K8 133 aa12.31□□□□□ -0.44
SNX1-212ENST00000560861 PCSK9Q8NBP7 692 aaKnown RBP12.31□□□□□ -0.44
SNX1-212ENST00000560861 POMGNT1Q8WZA1 660 aa12.31□□□□□ -0.44
SNX1-212ENST00000560861 BICD1Q96G01 975 aa12.31□□□□□ -0.44
SNX1-212ENST00000560861 ABHD8Q96I13 439 aa12.31□□□□□ -0.44
SNX1-212ENST00000560861 PRIMPOLQ96LW4 560 aa12.31□□□□□ -0.44
SNX1-212ENST00000560861 TSEN34Q9BSV6 310 aaKnown RBP12.31□□□□□ -0.44
SNX1-212ENST00000560861 GANQ9H2C0 597 aa12.31□□□□□ -0.44
SNX1-212ENST00000560861 HMX1Q9NP08 348 aaPredicted RBP12.31□□□□□ -0.44
SNX1-212ENST00000560861 PRMT7Q9NVM4 692 aaPredicted RBP12.31□□□□□ -0.44
SNX1-212ENST00000560861 CAPN11Q9UMQ6 739 aa12.31□□□□□ -0.44
SNX1-212ENST00000560861 HTTP42858 3142 aa12.31□□□□□ -0.44
SNX1-212ENST00000560861 A0A1W2PQJ5 194 aa12.3□□□□□ -0.44
SNX1-212ENST00000560861 TTC26A0AVF1 554 aa12.3□□□□□ -0.44
SNX1-212ENST00000560861 INO80B-WBP1J3KQ70 363 aa12.3□□□□□ -0.44
SNX1-212ENST00000560861 CABYRO75952 493 aa12.3□□□□□ -0.44
SNX1-212ENST00000560861 TRIM49P0CI25 452 aa12.3□□□□□ -0.44
SNX1-212ENST00000560861 TRIM49CP0CI26 452 aa12.3□□□□□ -0.44
SNX1-212ENST00000560861 GNAT1P11488 350 aa12.3□□□□□ -0.44
SNX1-212ENST00000560861 CASP14P31944 242 aa12.3□□□□□ -0.44
SNX1-212ENST00000560861 FMO5P49326 533 aa12.3□□□□□ -0.44
SNX1-212ENST00000560861 VAMP7P51809 220 aa12.3□□□□□ -0.44
SNX1-212ENST00000560861 ACLYP53396 1101 aa12.3□□□□□ -0.44
SNX1-212ENST00000560861 WNT7BP56706 349 aa12.3□□□□□ -0.44
SNX1-212ENST00000560861 NLRP11P59045 1033 aaKnown RBP12.3□□□□□ -0.44
SNX1-212ENST00000560861 CLDN10P78369 228 aa12.3□□□□□ -0.44
SNX1-212ENST00000560861 CDC42EP1Q00587 391 aa12.3□□□□□ -0.44
SNX1-212ENST00000560861 PPP3CAQ08209 521 aa12.3□□□□□ -0.44
SNX1-212ENST00000560861 DCAF17Q5H9S7 520 aaPredicted RBP12.3□□□□□ -0.44
SNX1-212ENST00000560861 ZBTB41Q5SVQ8 909 aa12.3□□□□□ -0.44
SNX1-212ENST00000560861 GDF6Q6KF10 455 aaPredicted RBP12.3□□□□□ -0.44
SNX1-212ENST00000560861 RPAINQ86UA6 219 aa12.3□□□□□ -0.44
SNX1-212ENST00000560861 SERINC5Q86VE9 423 aa12.3□□□□□ -0.44
SNX1-212ENST00000560861 C7orf31Q8N865 590 aa12.3□□□□□ -0.44
SNX1-212ENST00000560861 LMO3Q8TAP4 145 aa12.3□□□□□ -0.44
SNX1-212ENST00000560861 PARD3BQ8TEW8 1205 aa12.3□□□□□ -0.44
SNX1-212ENST00000560861 DNAJB3Q8WWF6 145 aa12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms