RNA–Protein interactions for RNA: ENST00000560734.5

SHF-208, Transcript of Src homology 2 domain containing F, humanhuman

TSL 3 BASIC

Gene SHF, Length 1,731 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHF-208ENST00000560734 HDAC6Q9UBN7 1215 aa27.2■■□□□ 1.94
SHF-208ENST00000560734 SALL4Q9UJQ4 1053 aa27.2■■□□□ 1.94
SHF-208ENST00000560734 EXTL3O43909 919 aa27.19■■□□□ 1.94
SHF-208ENST00000560734 SORBS3O60504 671 aa27.19■■□□□ 1.94
SHF-208ENST00000560734 GPC3P51654 580 aa27.19■■□□□ 1.94
SHF-208ENST00000560734 KRT222Q8N1A0 295 aa27.19■■□□□ 1.94
SHF-208ENST00000560734 DEPTORQ8TB45 409 aa27.19■■□□□ 1.94
SHF-208ENST00000560734 TCP11Q8WWU5 503 aa27.19■■□□□ 1.94
SHF-208ENST00000560734 JPH2Q9BR39 696 aaPredicted RBP27.19■■□□□ 1.94
SHF-208ENST00000560734 RNF14Q9UBS8 474 aa27.19■■□□□ 1.94
SHF-208ENST00000560734 MORF4L1Q9UBU8 362 aa27.19■■□□□ 1.94
SHF-208ENST00000560734 CLEC11AQ9Y240 323 aa27.19■■□□□ 1.94
SHF-208ENST00000560734 DIS3Q9Y2L1 958 aaKnown RBP27.19■■□□□ 1.94
SHF-208ENST00000560734 HYOU1Q9Y4L1 999 aa27.19■■□□□ 1.94
SHF-208ENST00000560734 STRNO43815 780 aa27.19■■□□□ 1.94
SHF-208ENST00000560734 ARIH2O95376 493 aa27.19■■□□□ 1.94
SHF-208ENST00000560734 KLRC1P26715 233 aa27.19■■□□□ 1.94
SHF-208ENST00000560734 LIG4P49917 911 aa27.19■■□□□ 1.94
SHF-208ENST00000560734 IER5Q5VY09 327 aa27.19■■□□□ 1.94
SHF-208ENST00000560734 ZNF467Q7Z7K2 595 aaPredicted RBP27.19■■□□□ 1.94
SHF-208ENST00000560734 ASAP3Q8TDY4 903 aa27.19■■□□□ 1.94
SHF-208ENST00000560734 SCFD2Q8WU76 684 aa27.19■■□□□ 1.94
SHF-208ENST00000560734 BICD1Q96G01 975 aa27.19■■□□□ 1.94
SHF-208ENST00000560734 ZNF233A6NK53 670 aa27.18■■□□□ 1.94
SHF-208ENST00000560734 ZC3H11AO75152 810 aaKnown RBP eCLIP27.18■■□□□ 1.94
SHF-208ENST00000560734 LDHAP00338 332 aaKnown RBP27.18■■□□□ 1.94
SHF-208ENST00000560734 H2AFZP0C0S5 128 aa27.18■■□□□ 1.94
SHF-208ENST00000560734 EFNA5P52803 228 aa27.18■■□□□ 1.94
SHF-208ENST00000560734 TTLL4Q14679 1199 aa27.18■■□□□ 1.94
SHF-208ENST00000560734 TMCO3Q6UWJ1 677 aa27.18■■□□□ 1.94
SHF-208ENST00000560734 H2AFVQ71UI9 128 aa27.18■■□□□ 1.94
SHF-208ENST00000560734 ZSWIM2Q8NEG5 633 aa27.18■■□□□ 1.94
SHF-208ENST00000560734 ATP8B4Q8TF62 1192 aa27.18■■□□□ 1.94
SHF-208ENST00000560734 TMEM143Q96AN5 459 aa27.18■■□□□ 1.94
SHF-208ENST00000560734 RAB21Q9UL25 225 aa27.18■■□□□ 1.94
SHF-208ENST00000560734 GOLGA8IPA6NC78 632 aa27.17■■□□□ 1.94
SHF-208ENST00000560734 GOLGA8JA6NMD2 632 aa27.17■■□□□ 1.94
SHF-208ENST00000560734 LRRIQ3A6PVS8 624 aaPredicted RBP27.17■■□□□ 1.94
SHF-208ENST00000560734 K7ERI5 159 aa27.17■■□□□ 1.94
SHF-208ENST00000560734 NOP56O00567 594 aaKnown RBP27.17■■□□□ 1.94
SHF-208ENST00000560734 DDX3XO00571 662 aaKnown RBP eCLIP27.17■■□□□ 1.944e-7■■□□□ 14.2
SHF-208ENST00000560734 ZRANB2O95218 330 aaKnown RBP eCLIP27.17■■□□□ 1.94
SHF-208ENST00000560734 BRD3Q15059 726 aa27.17■■□□□ 1.94
SHF-208ENST00000560734 ENOX2Q16206 610 aaKnown RBP27.17■■□□□ 1.94
SHF-208ENST00000560734 GPIHBP1Q8IV16 184 aa27.17■■□□□ 1.94
SHF-208ENST00000560734 SAAL1Q96ER3 474 aa27.17■■□□□ 1.94
SHF-208ENST00000560734 CALR3Q96L12 384 aaKnown RBP27.17■■□□□ 1.94
SHF-208ENST00000560734 UBE2TQ9NPD8 197 aaPredicted RBP27.17■■□□□ 1.94
SHF-208ENST00000560734 IGKV6-21A0A0C4DH24 114 aa27.16■■□□□ 1.94
SHF-208ENST00000560734 ZSCAN20P17040 1043 aaPredicted RBP27.16■■□□□ 1.94
SHF-208ENST00000560734 ZNF792Q3KQV3 632 aa27.16■■□□□ 1.94
SHF-208ENST00000560734 DHX37Q8IY37 1157 aaKnown RBP27.16■■□□□ 1.94
SHF-208ENST00000560734 FBXL13Q8NEE6 735 aa27.16■■□□□ 1.94
SHF-208ENST00000560734 OLIG1Q8TAK6 271 aa27.16■■□□□ 1.94
SHF-208ENST00000560734 PSPC1Q8WXF1 523 aaKnown RBP27.16■■□□□ 1.94
SHF-208ENST00000560734 ARID3AQ99856 593 aa27.16■■□□□ 1.94
SHF-208ENST00000560734 PARD6BQ9BYG5 372 aa27.16■■□□□ 1.94
SHF-208ENST00000560734 SMARCAD1Q9H4L7 1026 aa27.16■■□□□ 1.94
SHF-208ENST00000560734 ZNF446Q9NWS9 450 aa27.16■■□□□ 1.94
SHF-208ENST00000560734 SPDYE4A6NLX3 237 aa27.16■■□□□ 1.94
SHF-208ENST00000560734 PDHXO00330 501 aa27.16■■□□□ 1.94
SHF-208ENST00000560734 ADCY3O60266 1144 aa27.16■■□□□ 1.94
SHF-208ENST00000560734 MXD4Q14582 209 aaPredicted RBP27.16■■□□□ 1.94
SHF-208ENST00000560734 PSMD6Q15008 389 aa27.16■■□□□ 1.94
SHF-208ENST00000560734 ENOSF1Q7L5Y1 443 aa27.16■■□□□ 1.94
SHF-208ENST00000560734 EEPD1Q7L9B9 569 aa27.16■■□□□ 1.94
SHF-208ENST00000560734 ANKRD13CQ8N6S4 541 aa27.16■■□□□ 1.94
SHF-208ENST00000560734 LMBR1Q8WVP7 490 aa27.16■■□□□ 1.94
SHF-208ENST00000560734 CCDC151A5D8V7 595 aa27.15■■□□□ 1.94
SHF-208ENST00000560734 FOXN3O00409 490 aaPredicted RBP27.15■■□□□ 1.94
SHF-208ENST00000560734 MFAP3P55082 362 aa27.15■■□□□ 1.94
SHF-208ENST00000560734 ZPBP2Q6X784 338 aa27.15■■□□□ 1.94
SHF-208ENST00000560734 HNRNPLLQ8WVV9 542 aaKnown RBP27.15■■□□□ 1.94
SHF-208ENST00000560734 GLG1Q92896 1179 aa27.15■■□□□ 1.94
SHF-208ENST00000560734 OSBPL9Q96SU4 736 aa27.15■■□□□ 1.94
SHF-208ENST00000560734 TLR10Q9BXR5 811 aa27.15■■□□□ 1.94
SHF-208ENST00000560734 VTA1Q9NP79 307 aa27.15■■□□□ 1.94
SHF-208ENST00000560734 ZNFX1Q9P2E3 1918 aaKnown RBP27.15■■□□□ 1.94
SHF-208ENST00000560734 RBM47A0AV96 593 aaKnown RBP27.14■■□□□ 1.94
SHF-208ENST00000560734 ZBTB48P10074 688 aaPredicted RBP27.14■■□□□ 1.94
SHF-208ENST00000560734 CYP2C8P10632 490 aa27.14■■□□□ 1.94
SHF-208ENST00000560734 NAP1L1P55209 391 aaKnown RBP27.14■■□□□ 1.94
SHF-208ENST00000560734 SMYD5Q6GMV2 418 aa27.14■■□□□ 1.94
SHF-208ENST00000560734 C15orf39Q6ZRI6 1047 aa27.14■■□□□ 1.94
SHF-208ENST00000560734 CREG2Q8IUH2 290 aa27.14■■□□□ 1.94
SHF-208ENST00000560734 SPATA33Q96N06 139 aa27.14■■□□□ 1.94
SHF-208ENST00000560734 PACSIN1Q9BY11 444 aa27.14■■□□□ 1.94
SHF-208ENST00000560734 ANKZF1Q9H8Y5 726 aa27.14■■□□□ 1.94
SHF-208ENST00000560734 CCL15-CCL14A0A0B4J2E2 113 aa27.13■■□□□ 1.93
SHF-208ENST00000560734 LRRIQ4A6NIV6 560 aa27.13■■□□□ 1.93
SHF-208ENST00000560734 CES2O00748 559 aa27.13■■□□□ 1.93
SHF-208ENST00000560734 TXNP10599 105 aaKnown RBP27.13■■□□□ 1.93
SHF-208ENST00000560734 GABPB1Q06547 395 aaPredicted RBP27.13■■□□□ 1.93
SHF-208ENST00000560734 CCL15Q16663 113 aa27.13■■□□□ 1.93
SHF-208ENST00000560734 HSDL1Q3SXM5 330 aa27.13■■□□□ 1.93
SHF-208ENST00000560734 WDR78Q5VTH9 848 aa27.13■■□□□ 1.93
SHF-208ENST00000560734 MAP1SQ66K74 1059 aaPredicted RBP27.13■■□□□ 1.93
SHF-208ENST00000560734 CDCA2Q69YH5 1023 aaPredicted RBP27.13■■□□□ 1.93
SHF-208ENST00000560734 FAM71AQ8IYT1 594 aa27.13■■□□□ 1.93
SHF-208ENST00000560734 LNX1Q8TBB1 728 aaPredicted RBP27.13■■□□□ 1.93
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms