RNA–Protein interactions for RNA: ENST00000560716.1

APH1B-209, Transcript of aph-1 homolog B, gamma-secretase subunit, humanhuman

TSL 3

Gene APH1B, Length 731 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APH1B-209ENST00000560716 PCBP1Q15365 356 aaKnown RBP eCLIP8.39□□□□□ -1.07
APH1B-209ENST00000560716 CASC1Q6TDU7 716 aa8.39□□□□□ -1.07
APH1B-209ENST00000560716 HEATR3Q7Z4Q2 680 aa8.39□□□□□ -1.07
APH1B-209ENST00000560716 CKAP2LQ8IYA6 745 aa8.39□□□□□ -1.07
APH1B-209ENST00000560716 COLGALT2Q8IYK4 626 aa8.39□□□□□ -1.07
APH1B-209ENST00000560716 ZNF687Q8N1G0 1237 aa8.39□□□□□ -1.07
APH1B-209ENST00000560716 CMTR1Q8N1G2 835 aaKnown RBP8.39□□□□□ -1.07
APH1B-209ENST00000560716 LRRC71Q8N4P6 559 aa8.39□□□□□ -1.07
APH1B-209ENST00000560716 CNNM3Q8NE01 707 aa8.39□□□□□ -1.07
APH1B-209ENST00000560716 URGCPQ8TCY9 931 aa8.39□□□□□ -1.07
APH1B-209ENST00000560716 NETO1Q8TDF5 533 aa8.39□□□□□ -1.07
APH1B-209ENST00000560716 SMG7Q92540 1137 aaKnown RBP8.39□□□□□ -1.07
APH1B-209ENST00000560716 RIT2Q99578 217 aa8.39□□□□□ -1.07
APH1B-209ENST00000560716 ZNF577Q9BSK1 485 aa8.39□□□□□ -1.07
APH1B-209ENST00000560716 ZMYND12Q9H0C1 365 aa8.39□□□□□ -1.07
APH1B-209ENST00000560716 RWDD1Q9H446 243 aaPredicted RBP8.39□□□□□ -1.07
APH1B-209ENST00000560716 UBN1Q9NPG3 1134 aa8.39□□□□□ -1.07
APH1B-209ENST00000560716 AGPAT5Q9NUQ2 364 aa8.39□□□□□ -1.07
APH1B-209ENST00000560716 RBM28Q9NW13 759 aaKnown RBP8.39□□□□□ -1.07
APH1B-209ENST00000560716 NCDNQ9UBB6 729 aa8.39□□□□□ -1.07
APH1B-209ENST00000560716 GABBR1Q9UBS5 961 aa8.39□□□□□ -1.07
APH1B-209ENST00000560716 CDV3Q9UKY7 258 aaKnown RBP8.39□□□□□ -1.07
APH1B-209ENST00000560716 SMG5Q9UPR3 1016 aaKnown RBP8.39□□□□□ -1.07
APH1B-209ENST00000560716 FAN1Q9Y2M0 1017 aa8.39□□□□□ -1.07
APH1B-209ENST00000560716 NUMBLQ9Y6R0 609 aa8.39□□□□□ -1.07
APH1B-209ENST00000560716 COL4A3Q01955 1670 aa8.39□□□□□ -1.07
APH1B-209ENST00000560716 FAM208BQ5VWN6 2430 aa8.38□□□□□ -1.07
APH1B-209ENST00000560716 SMCO2A6NFE2 343 aa8.38□□□□□ -1.07
APH1B-209ENST00000560716 SHISA7A6NL88 538 aa8.38□□□□□ -1.07
APH1B-209ENST00000560716 LAMTOR5O43504 91 aa8.38□□□□□ -1.07
APH1B-209ENST00000560716 EDIL3O43854 480 aa8.38□□□□□ -1.07
APH1B-209ENST00000560716 MAFO75444 373 aaPredicted RBP8.38□□□□□ -1.07
APH1B-209ENST00000560716 RFPL2O75678 378 aa8.38□□□□□ -1.07
APH1B-209ENST00000560716 ZMYND10O75800 440 aa8.38□□□□□ -1.07
APH1B-209ENST00000560716 URODP06132 367 aa8.38□□□□□ -1.07
APH1B-209ENST00000560716 HNRNPA1P09651 372 aaKnown RBP eCLIP8.38□□□□□ -1.07
APH1B-209ENST00000560716 GSPT1P15170 499 aaKnown RBP8.38□□□□□ -1.07
APH1B-209ENST00000560716 NCLP19338 710 aaKnown RBP8.38□□□□□ -1.07
APH1B-209ENST00000560716 ZNF76P36508 570 aa8.38□□□□□ -1.07
APH1B-209ENST00000560716 GLUD2P49448 558 aa8.38□□□□□ -1.07
APH1B-209ENST00000560716 NAPAP54920 295 aa8.38□□□□□ -1.07
APH1B-209ENST00000560716 CREMQ03060 361 aa8.38□□□□□ -1.07
APH1B-209ENST00000560716 MLF2Q15773 248 aaPredicted RBP8.38□□□□□ -1.07
APH1B-209ENST00000560716 UBXN11Q5T124 520 aa8.38□□□□□ -1.07
APH1B-209ENST00000560716 TWF2Q6IBS0 349 aaKnown RBP8.38□□□□□ -1.07
APH1B-209ENST00000560716 MTSS1LQ765P7 747 aa8.38□□□□□ -1.07
APH1B-209ENST00000560716 RNF169Q8NCN4 708 aa8.38□□□□□ -1.07
APH1B-209ENST00000560716 ATRIPQ8WXE1 791 aa8.38□□□□□ -1.07
APH1B-209ENST00000560716 LPPQ93052 612 aa8.38□□□□□ -1.07
APH1B-209ENST00000560716 PPP1R16BQ96T49 567 aa8.38□□□□□ -1.07
APH1B-209ENST00000560716 HINFPQ9BQA5 517 aa8.38□□□□□ -1.07
APH1B-209ENST00000560716 FOXQ1Q9C009 403 aa8.38□□□□□ -1.07
APH1B-209ENST00000560716 IFT122Q9HBG6 1241 aa8.38□□□□□ -1.07
APH1B-209ENST00000560716 PARD6AQ9NPB6 346 aa8.38□□□□□ -1.07
APH1B-209ENST00000560716 LTB4R2Q9NPC1 389 aa8.38□□□□□ -1.07
APH1B-209ENST00000560716 AVENQ9NQS1 362 aaPredicted RBP8.38□□□□□ -1.07
APH1B-209ENST00000560716 CDH7Q9ULB5 785 aa8.38□□□□□ -1.07
APH1B-209ENST00000560716 PPME1Q9Y570 386 aa8.38□□□□□ -1.07
APH1B-209ENST00000560716 PCDHB2Q9Y5E7 798 aa8.38□□□□□ -1.07
APH1B-209ENST00000560716 SLC12A7Q9Y666 1083 aa8.38□□□□□ -1.07
APH1B-209ENST00000560716 NID2Q14112 1375 aa8.37□□□□□ -1.07
APH1B-209ENST00000560716 SPAG17Q6Q759 2223 aa8.37□□□□□ -1.07
APH1B-209ENST00000560716 A0A087WZ62 844 aa8.37□□□□□ -1.07
APH1B-209ENST00000560716 hCG_1642624A0A1W2PR95 340 aa8.37□□□□□ -1.07
APH1B-209ENST00000560716 DDX39AO00148 427 aaKnown RBP8.37□□□□□ -1.07
APH1B-209ENST00000560716 NCAM2O15394 837 aa8.37□□□□□ -1.07
APH1B-209ENST00000560716 TGM5O43548 720 aa8.37□□□□□ -1.07
APH1B-209ENST00000560716 FGFR4P22455 802 aa8.37□□□□□ -1.07
APH1B-209ENST00000560716 RFX1P22670 979 aa8.37□□□□□ -1.07
APH1B-209ENST00000560716 HOXA11P31270 313 aaPredicted RBP8.37□□□□□ -1.07
APH1B-209ENST00000560716 JAK3P52333 1124 aa8.37□□□□□ -1.07
APH1B-209ENST00000560716 LIMK1P53667 647 aa8.37□□□□□ -1.07
APH1B-209ENST00000560716 GPC5P78333 572 aa8.37□□□□□ -1.07
APH1B-209ENST00000560716 PRKCEQ02156 737 aa8.37□□□□□ -1.07
APH1B-209ENST00000560716 RNASELQ05823 741 aaKnown RBP8.37□□□□□ -1.07
APH1B-209ENST00000560716 DRP2Q13474 957 aa8.37□□□□□ -1.07
APH1B-209ENST00000560716 SLC44A4Q53GD3 710 aa8.37□□□□□ -1.07
APH1B-209ENST00000560716 XKR3Q5GH77 459 aa8.37□□□□□ -1.07
APH1B-209ENST00000560716 SPECC1Q5M775 1068 aa8.37□□□□□ -1.07
APH1B-209ENST00000560716 TTC22Q5TAA0 569 aa8.37□□□□□ -1.07
APH1B-209ENST00000560716 LAIR1Q6GTX8 287 aa8.37□□□□□ -1.07
APH1B-209ENST00000560716 APOA5Q6Q788 366 aa8.37□□□□□ -1.07
APH1B-209ENST00000560716 SRGAP1Q7Z6B7 1085 aa8.37□□□□□ -1.07
APH1B-209ENST00000560716 CELF5Q8N6W0 485 aaKnown RBP8.37□□□□□ -1.07
APH1B-209ENST00000560716 EXOC6Q8TAG9 804 aa8.37□□□□□ -1.07
APH1B-209ENST00000560716 NLRP7Q8WX94 980 aa8.37□□□□□ -1.07
APH1B-209ENST00000560716 DDX1Q92499 740 aaKnown RBP8.37□□□□□ -1.07
APH1B-209ENST00000560716 SLC5A5Q92911 643 aa8.37□□□□□ -1.07
APH1B-209ENST00000560716 FGF14Q92915 247 aa8.37□□□□□ -1.07
APH1B-209ENST00000560716 PGBD1Q96JS3 809 aa8.37□□□□□ -1.07
APH1B-209ENST00000560716 JPH2Q9BR39 696 aaPredicted RBP8.37□□□□□ -1.07
APH1B-209ENST00000560716 FDXACB1Q9BRP7 624 aaPredicted RBP8.37□□□□□ -1.07
APH1B-209ENST00000560716 RSAD1Q9HA92 442 aa8.37□□□□□ -1.07
APH1B-209ENST00000560716 TRPV5Q9NQA5 729 aa8.37□□□□□ -1.07
APH1B-209ENST00000560716 DISC1Q9NRI5 854 aa8.37□□□□□ -1.07
APH1B-209ENST00000560716 TM4SF5O14894 197 aa8.36□□□□□ -1.07
APH1B-209ENST00000560716 GAS2O43903 313 aaKnown RBP8.36□□□□□ -1.07
APH1B-209ENST00000560716 LRRN2O75325 713 aa8.36□□□□□ -1.07
APH1B-209ENST00000560716 PAPSS2O95340 614 aaPredicted RBP8.36□□□□□ -1.07
APH1B-209ENST00000560716 IGHDP01880 384 aa8.36□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms