RNA–Protein interactions for RNA: ENST00000560349.1

CARMIL3-203, Transcript of capping protein regulator and myosin 1 linker 3, humanhuman

TSL 1 (best)

Gene CARMIL3, Length 2,664 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CARMIL3-203ENST00000560349 KCTD2Q14681 263 aa15.29■□□□□ 0.04
CARMIL3-203ENST00000560349 ARMC9Q7Z3E5 817 aa15.29■□□□□ 0.04
CARMIL3-203ENST00000560349 MCPH1Q8NEM0 835 aa15.29■□□□□ 0.04
CARMIL3-203ENST00000560349 GLG1Q92896 1179 aa15.29■□□□□ 0.04
CARMIL3-203ENST00000560349 SLC10A4Q96EP9 437 aa15.29■□□□□ 0.04
CARMIL3-203ENST00000560349 TAS2R14Q9NYV8 317 aa15.29■□□□□ 0.04
CARMIL3-203ENST00000560349 SNX12Q9UMY4 172 aa15.29■□□□□ 0.04
CARMIL3-203ENST00000560349 JRKLQ9Y4A0 524 aa15.29■□□□□ 0.04
CARMIL3-203ENST00000560349 ARID2Q68CP9 1835 aa15.28■□□□□ 0.04
CARMIL3-203ENST00000560349 CCDC66A2RUB6 948 aa15.28■□□□□ 0.04
CARMIL3-203ENST00000560349 TTLL13PA6NNM8 815 aa15.28■□□□□ 0.04
CARMIL3-203ENST00000560349 LRRIQ3A6PVS8 624 aaPredicted RBP15.28■□□□□ 0.04
CARMIL3-203ENST00000560349 ICAM3P32942 547 aa15.28■□□□□ 0.04
CARMIL3-203ENST00000560349 ZBTB41Q5SVQ8 909 aa15.28■□□□□ 0.04
CARMIL3-203ENST00000560349 PPM1KQ8N3J5 372 aa15.28■□□□□ 0.04
CARMIL3-203ENST00000560349 LRRC71Q8N4P6 559 aa15.28■□□□□ 0.04
CARMIL3-203ENST00000560349 IFT74Q96LB3 600 aa15.28■□□□□ 0.04
CARMIL3-203ENST00000560349 TLR10Q9BXR5 811 aa15.28■□□□□ 0.04
CARMIL3-203ENST00000560349 ST6GALNAC4Q9H4F1 302 aa15.28■□□□□ 0.04
CARMIL3-203ENST00000560349 GLRA2P23416 452 aa15.28■□□□□ 0.04
CARMIL3-203ENST00000560349 STAT5BP51692 787 aa15.28■□□□□ 0.04
CARMIL3-203ENST00000560349 VSNL1P62760 191 aa15.28■□□□□ 0.04
CARMIL3-203ENST00000560349 LONRF2Q1L5Z9 754 aa15.28■□□□□ 0.04
CARMIL3-203ENST00000560349 OLIG1Q8TAK6 271 aa15.28■□□□□ 0.04
CARMIL3-203ENST00000560349 TIPINQ9BVW5 301 aa15.28■□□□□ 0.04
CARMIL3-203ENST00000560349 STK33Q9BYT3 514 aa15.28■□□□□ 0.04
CARMIL3-203ENST00000560349 HYOU1Q9Y4L1 999 aa15.28■□□□□ 0.04
CARMIL3-203ENST00000560349 A0A0G2JMZ2 1700 aa15.28■□□□□ 0.04
CARMIL3-203ENST00000560349 LOC285556D6RIA3 1793 aa15.27■□□□□ 0.04
CARMIL3-203ENST00000560349 ERVK-9P63128 1117 aa15.27■□□□□ 0.04
CARMIL3-203ENST00000560349 NAB2Q15742 525 aa15.27■□□□□ 0.04
CARMIL3-203ENST00000560349 TAS1R2Q8TE23 839 aa15.27■□□□□ 0.04
CARMIL3-203ENST00000560349 SLC7A3Q8WY07 619 aa15.27■□□□□ 0.04
CARMIL3-203ENST00000560349 OSBPL9Q96SU4 736 aa15.27■□□□□ 0.04
CARMIL3-203ENST00000560349 EXOC7Q9UPT5 735 aa15.27■□□□□ 0.04
CARMIL3-203ENST00000560349 NOP56O00567 594 aaKnown RBP15.27■□□□□ 0.03
CARMIL3-203ENST00000560349 CLSTN1O94985 981 aa15.27■□□□□ 0.03
CARMIL3-203ENST00000560349 LIG4P49917 911 aa15.27■□□□□ 0.03
CARMIL3-203ENST00000560349 CREG2Q8IUH2 290 aa15.27■□□□□ 0.03
CARMIL3-203ENST00000560349 PARD3BQ8TEW8 1205 aa15.27■□□□□ 0.03
CARMIL3-203ENST00000560349 DHX38Q92620 1227 aaKnown RBP15.27■□□□□ 0.03
CARMIL3-203ENST00000560349 PPP1R16BQ96T49 567 aa15.27■□□□□ 0.03
CARMIL3-203ENST00000560349 HAPLN2Q9GZV7 340 aa15.27■□□□□ 0.03
CARMIL3-203ENST00000560349 ANO9A1A5B4 782 aa15.26■□□□□ 0.03
CARMIL3-203ENST00000560349 GRID2IPA4D2P6 1211 aa15.26■□□□□ 0.03
CARMIL3-203ENST00000560349 CCDC151A5D8V7 595 aa15.26■□□□□ 0.03
CARMIL3-203ENST00000560349 DKC1O60832 514 aaKnown RBP eCLIP15.26■□□□□ 0.03
CARMIL3-203ENST00000560349 ATG7O95352 703 aa15.26■□□□□ 0.03
CARMIL3-203ENST00000560349 PRKCIP41743 596 aa15.26■□□□□ 0.03
CARMIL3-203ENST00000560349 NLRP11P59045 1033 aaKnown RBP15.26■□□□□ 0.03
CARMIL3-203ENST00000560349 EPC2Q52LR7 807 aa15.26■□□□□ 0.03
CARMIL3-203ENST00000560349 GSPT2Q8IYD1 628 aaKnown RBP15.26■□□□□ 0.03
CARMIL3-203ENST00000560349 ZC3H15Q8WU90 426 aaKnown RBP15.26■□□□□ 0.03
CARMIL3-203ENST00000560349 SPIRE2Q8WWL2 714 aa15.26■□□□□ 0.03
CARMIL3-203ENST00000560349 TARS2Q9BW92 718 aaKnown RBP15.26■□□□□ 0.03
CARMIL3-203ENST00000560349 ARHGAP28Q9P2N2 729 aa15.26■□□□□ 0.03
CARMIL3-203ENST00000560349 SCARA3Q6AZY7 606 aa15.26■□□□□ 0.03
CARMIL3-203ENST00000560349 C12orf56Q8IXR9 622 aa15.26■□□□□ 0.03
CARMIL3-203ENST00000560349 DEPTORQ8TB45 409 aa15.26■□□□□ 0.03
CARMIL3-203ENST00000560349 GDAP1L1Q96MZ0 367 aa15.26■□□□□ 0.03
CARMIL3-203ENST00000560349 NTPCRQ9BSD7 190 aaKnown RBP15.26■□□□□ 0.03
CARMIL3-203ENST00000560349 DHX33Q9H6R0 707 aaKnown RBP15.26■□□□□ 0.03
CARMIL3-203ENST00000560349 OSGEPQ9NPF4 335 aa15.26■□□□□ 0.03
CARMIL3-203ENST00000560349 FBXL5Q9UKA1 691 aa15.26■□□□□ 0.03
CARMIL3-203ENST00000560349 FERP16591 822 aa15.25■□□□□ 0.03
CARMIL3-203ENST00000560349 OSBPP22059 807 aa15.25■□□□□ 0.03
CARMIL3-203ENST00000560349 SNAPC2Q13487 334 aa15.25■□□□□ 0.03
CARMIL3-203ENST00000560349 BRD3Q15059 726 aa15.25■□□□□ 0.03
CARMIL3-203ENST00000560349 METTL7BQ6UX53 244 aa15.25■□□□□ 0.03
CARMIL3-203ENST00000560349 CDR2LQ86X02 465 aaPredicted RBP15.25■□□□□ 0.03
CARMIL3-203ENST00000560349 SPATA33Q96N06 139 aa15.25■□□□□ 0.03
CARMIL3-203ENST00000560349 MAP2K7O14733 419 aa15.25■□□□□ 0.03
CARMIL3-203ENST00000560349 SRGAP2CP0DJJ0 459 aa15.25■□□□□ 0.03
CARMIL3-203ENST00000560349 GYS2P54840 703 aa15.25■□□□□ 0.03
CARMIL3-203ENST00000560349 NEDD9Q14511 834 aa15.25■□□□□ 0.03
CARMIL3-203ENST00000560349 FASTKD5Q7L8L6 764 aaKnown RBP15.25■□□□□ 0.03
CARMIL3-203ENST00000560349 PPP1R13LQ8WUF5 828 aa15.25■□□□□ 0.03
CARMIL3-203ENST00000560349 KREMEN1Q96MU8 473 aa15.25■□□□□ 0.03
CARMIL3-203ENST00000560349 CEP89Q96ST8 783 aa15.25■□□□□ 0.03
CARMIL3-203ENST00000560349 LUC7LQ9NQ29 371 aaKnown RBP15.25■□□□□ 0.03
CARMIL3-203ENST00000560349 PTPRJQ12913 1337 aa15.25■□□□□ 0.03
CARMIL3-203ENST00000560349 H3BQF6 201 aa15.24■□□□□ 0.03
CARMIL3-203ENST00000560349 GALCP54803 685 aa15.24■□□□□ 0.03
CARMIL3-203ENST00000560349 HNRNPH2P55795 449 aaKnown RBP15.24■□□□□ 0.03
CARMIL3-203ENST00000560349 IGBP1P78318 339 aa15.24■□□□□ 0.03
CARMIL3-203ENST00000560349 CYP24A1Q07973 514 aa15.24■□□□□ 0.03
CARMIL3-203ENST00000560349 CAPSQ13938 189 aa15.24■□□□□ 0.03
CARMIL3-203ENST00000560349 MYBPC2Q14324 1141 aa15.24■□□□□ 0.03
CARMIL3-203ENST00000560349 BEND6Q5SZJ8 279 aaPredicted RBP15.24■□□□□ 0.03
CARMIL3-203ENST00000560349 LDLRAD1Q5T700 205 aa15.24■□□□□ 0.03
CARMIL3-203ENST00000560349 SV2AQ7L0J3 742 aa15.24■□□□□ 0.03
CARMIL3-203ENST00000560349 SEPT1Q8WYJ6 367 aa15.24■□□□□ 0.03
CARMIL3-203ENST00000560349 AZI2Q9H6S1 392 aa15.24■□□□□ 0.03
CARMIL3-203ENST00000560349 PDE11AQ9HCR9 933 aa15.24■□□□□ 0.03
CARMIL3-203ENST00000560349 BZW2Q9Y6E2 419 aaKnown RBP15.24■□□□□ 0.03
CARMIL3-203ENST00000560349 IGKV6D-21A0A0A0MT36 114 aa15.24■□□□□ 0.03
CARMIL3-203ENST00000560349 K7ERI5 159 aa15.24■□□□□ 0.03
CARMIL3-203ENST00000560349 PDHXO00330 501 aa15.24■□□□□ 0.03
CARMIL3-203ENST00000560349 CYP26A1O43174 497 aa15.24■□□□□ 0.03
CARMIL3-203ENST00000560349 CSDE1O75534 798 aaKnown RBP15.24■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms