RNA–Protein interactions for RNA: ENST00000560208.1

CRNDE-209, Transcript of colorectal neoplasia differentially expressed, humanhuman

TSL 2

Gene CRNDE, Length 735 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRNDE-209ENST00000560208 KANSL3Q9P2N6 904 aa25.74■■□□□ 1.71
CRNDE-209ENST00000560208 RAPGEFL1Q9UHV5 662 aa25.74■■□□□ 1.71
CRNDE-209ENST00000560208 IPPQ9Y573 584 aa25.74■■□□□ 1.71
CRNDE-209ENST00000560208 FAM86C2PA6NEL3 165 aa25.73■■□□□ 1.71
CRNDE-209ENST00000560208 B4GALT3O60512 393 aa25.73■■□□□ 1.71
CRNDE-209ENST00000560208 GPR37L1O60883 481 aa25.73■■□□□ 1.71
CRNDE-209ENST00000560208 DDHD2O94830 711 aa25.73■■□□□ 1.71
CRNDE-209ENST00000560208 CXCL14O95715 111 aa25.73■■□□□ 1.71
CRNDE-209ENST00000560208 SLC11A1P49279 550 aa25.73■■□□□ 1.71
CRNDE-209ENST00000560208 LLGL2Q6P1M3 1020 aa25.73■■□□□ 1.71
CRNDE-209ENST00000560208 DDX53Q86TM3 631 aaKnown RBP25.73■■□□□ 1.71
CRNDE-209ENST00000560208 BCL7CQ8WUZ0 217 aaPredicted RBP25.73■■□□□ 1.71
CRNDE-209ENST00000560208 UBN1Q9NPG3 1134 aa25.73■■□□□ 1.71
CRNDE-209ENST00000560208 DCXO43602 365 aa25.72■■□□□ 1.71
CRNDE-209ENST00000560208 POMCP01189 267 aa25.72■■□□□ 1.71
CRNDE-209ENST00000560208 ARF4P18085 180 aaPredicted RBP25.72■■□□□ 1.71
CRNDE-209ENST00000560208 CA8P35219 290 aa25.72■■□□□ 1.71
CRNDE-209ENST00000560208 FXR2P51116 673 aaKnown RBP eCLIP25.72■■□□□ 1.71
CRNDE-209ENST00000560208 ANKRD54Q6NXT1 300 aa25.72■■□□□ 1.71
CRNDE-209ENST00000560208 FAM193BQ96PV7 902 aaPredicted RBP25.72■■□□□ 1.71
CRNDE-209ENST00000560208 ZBP1Q9H171 429 aa25.72■■□□□ 1.71
CRNDE-209ENST00000560208 TDRD15B5MCY1 1934 aaKnown RBP25.72■■□□□ 1.71
CRNDE-209ENST00000560208 ARHGEF35A5YM69 484 aa25.71■■□□□ 1.71
CRNDE-209ENST00000560208 LRRIQ4A6NIV6 560 aa25.71■■□□□ 1.71
CRNDE-209ENST00000560208 MUTP22033 750 aa25.71■■□□□ 1.71
CRNDE-209ENST00000560208 HAUS3Q68CZ6 603 aa25.71■■□□□ 1.71
CRNDE-209ENST00000560208 PADI6Q6TGC4 694 aa25.71■■□□□ 1.71
CRNDE-209ENST00000560208 AUTS2Q8WXX7 1259 aa25.71■■□□□ 1.71
CRNDE-209ENST00000560208 RNF39Q9H2S5 420 aa25.71■■□□□ 1.71
CRNDE-209ENST00000560208 HES2Q9Y543 173 aa25.71■■□□□ 1.71
CRNDE-209ENST00000560208 LAD1O00515 517 aa25.7■■□□□ 1.7
CRNDE-209ENST00000560208 B4GALT5O43286 388 aa25.7■■□□□ 1.7
CRNDE-209ENST00000560208 ALDH2P05091 517 aa25.7■■□□□ 1.7
CRNDE-209ENST00000560208 CTSAP10619 480 aa25.7■■□□□ 1.7
CRNDE-209ENST00000560208 CCT6AP40227 531 aaKnown RBP25.7■■□□□ 1.7
CRNDE-209ENST00000560208 ATP2C1P98194 919 aaPredicted RBP25.7■■□□□ 1.7
CRNDE-209ENST00000560208 SF3A1Q15459 793 aaKnown RBP25.7■■□□□ 1.7
CRNDE-209ENST00000560208 SYCE2Q6PIF2 218 aa25.7■■□□□ 1.7
CRNDE-209ENST00000560208 DTHD1Q6ZMT9 781 aa25.7■■□□□ 1.7
CRNDE-209ENST00000560208 TMEM175Q9BSA9 504 aa25.7■■□□□ 1.7
CRNDE-209ENST00000560208 TRIM6Q9C030 488 aaPredicted RBP25.7■■□□□ 1.7
CRNDE-209ENST00000560208 S1PR5Q9H228 398 aa25.7■■□□□ 1.7
CRNDE-209ENST00000560208 ZSCAN16Q9H4T2 348 aaPredicted RBP25.7■■□□□ 1.7
CRNDE-209ENST00000560208 LRWD1Q9UFC0 647 aa25.7■■□□□ 1.7
CRNDE-209ENST00000560208 FAN1Q9Y2M0 1017 aa25.7■■□□□ 1.7
CRNDE-209ENST00000560208 ARL5CA6NH57 179 aa25.69■■□□□ 1.7
CRNDE-209ENST00000560208 CLASP2O75122 1294 aaKnown RBP25.69■■□□□ 1.7
CRNDE-209ENST00000560208 HOXB8P17481 243 aaPredicted RBP25.69■■□□□ 1.7
CRNDE-209ENST00000560208 CYP11B2P19099 503 aa25.69■■□□□ 1.7
CRNDE-209ENST00000560208 CEBPZQ03701 1054 aaKnown RBP25.69■■□□□ 1.7
CRNDE-209ENST00000560208 PKP1Q13835 747 aa25.69■■□□□ 1.7
CRNDE-209ENST00000560208 PDIA5Q14554 519 aa25.69■■□□□ 1.7
CRNDE-209ENST00000560208 ECM1Q16610 540 aa25.69■■□□□ 1.7
CRNDE-209ENST00000560208 SUSD6Q92537 303 aa25.69■■□□□ 1.7
CRNDE-209ENST00000560208 CASP10Q92851 521 aa25.69■■□□□ 1.7
CRNDE-209ENST00000560208 GAD1Q99259 594 aa25.69■■□□□ 1.7
CRNDE-209ENST00000560208 APOL6Q9BWW8 343 aa25.69■■□□□ 1.7
CRNDE-209ENST00000560208 HCFC2Q9Y5Z7 792 aa25.69■■□□□ 1.7
CRNDE-209ENST00000560208 IRAK3Q9Y616 596 aa25.69■■□□□ 1.7
CRNDE-209ENST00000560208 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP25.68■■□□□ 1.7
CRNDE-209ENST00000560208 ZSCAN22P10073 491 aaPredicted RBP25.68■■□□□ 1.7
CRNDE-209ENST00000560208 GIT2Q14161 759 aa25.68■■□□□ 1.7
CRNDE-209ENST00000560208 IL17AQ16552 155 aa25.68■■□□□ 1.7
CRNDE-209ENST00000560208 FOXD4L6Q3SYB3 417 aaPredicted RBP25.68■■□□□ 1.7
CRNDE-209ENST00000560208 SLC27A1Q6PCB7 646 aa25.68■■□□□ 1.7
CRNDE-209ENST00000560208 FOXD4L3Q6VB84 417 aaPredicted RBP25.68■■□□□ 1.7
CRNDE-209ENST00000560208 CDR2LQ86X02 465 aaPredicted RBP25.68■■□□□ 1.7
CRNDE-209ENST00000560208 RNF135Q8IUD6 432 aa25.68■■□□□ 1.7
CRNDE-209ENST00000560208 ZBTB8OSQ8IWT0 167 aa25.68■■□□□ 1.7
CRNDE-209ENST00000560208 HACE1Q8IYU2 909 aa25.68■■□□□ 1.7
CRNDE-209ENST00000560208 TMEM87AQ8NBN3 555 aa25.68■■□□□ 1.7
CRNDE-209ENST00000560208 APOL5Q9BWW9 433 aa25.68■■□□□ 1.7
CRNDE-209ENST00000560208 PHF7Q9BWX1 381 aaPredicted RBP25.68■■□□□ 1.7
CRNDE-209ENST00000560208 VN1R3Q9BXE9 311 aa25.68■■□□□ 1.7
CRNDE-209ENST00000560208 RAB34Q9BZG1 259 aa25.68■■□□□ 1.7
CRNDE-209ENST00000560208 CLIC4Q9Y696 253 aa25.68■■□□□ 1.7
CRNDE-209ENST00000560208 A0A1B0GUA9 196 aa25.67■■□□□ 1.7
CRNDE-209ENST00000560208 LOC730098B7Z3J9 87 aa25.67■■□□□ 1.7
CRNDE-209ENST00000560208 NRP1O14786 923 aa25.67■■□□□ 1.7
CRNDE-209ENST00000560208 INPPL1O15357 1258 aa25.67■■□□□ 1.7
CRNDE-209ENST00000560208 NPTXRO95502 500 aa25.67■■□□□ 1.7
CRNDE-209ENST00000560208 MLH1P40692 756 aa25.67■■□□□ 1.7
CRNDE-209ENST00000560208 PRPHP41219 470 aa25.67■■□□□ 1.7
CRNDE-209ENST00000560208 CDCA2Q69YH5 1023 aaPredicted RBP25.67■■□□□ 1.7
CRNDE-209ENST00000560208 PPP4R3CPQ6ZMV5 832 aa25.67■■□□□ 1.7
CRNDE-209ENST00000560208 BSNDQ8WZ55 320 aa25.67■■□□□ 1.7
CRNDE-209ENST00000560208 ZFP42Q96MM3 310 aa25.67■■□□□ 1.7
CRNDE-209ENST00000560208 NXF3Q9H4D5 531 aaKnown RBP25.67■■□□□ 1.7
CRNDE-209ENST00000560208 PRMT7Q9NVM4 692 aaPredicted RBP25.67■■□□□ 1.7
CRNDE-209ENST00000560208 STK39Q9UEW8 545 aa25.67■■□□□ 1.7
CRNDE-209ENST00000560208 KIAA1024Q9UPX6 916 aa25.67■■□□□ 1.7
CRNDE-209ENST00000560208 GIT1Q9Y2X7 761 aa25.67■■□□□ 1.7
CRNDE-209ENST00000560208 STK24Q9Y6E0 443 aa25.67■■□□□ 1.7
CRNDE-209ENST00000560208 VWA3AA6NCI4 1184 aa25.66■■□□□ 1.7
CRNDE-209ENST00000560208 SCNN1GP51170 649 aa25.66■■□□□ 1.7
CRNDE-209ENST00000560208 CBX2Q14781 532 aaPredicted RBP25.66■■□□□ 1.7
CRNDE-209ENST00000560208 TPRNQ4KMQ1 711 aa25.66■■□□□ 1.7
CRNDE-209ENST00000560208 COLGALT2Q8IYK4 626 aa25.66■■□□□ 1.7
CRNDE-209ENST00000560208 IGSF22Q8N9C0 903 aa25.66■■□□□ 1.7
CRNDE-209ENST00000560208 PRIMPOLQ96LW4 560 aa25.66■■□□□ 1.7
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms