RNA–Protein interactions for RNA: ENST00000560202.1

USP3-218, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 5

Gene USP3, Length 1,681 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-218ENST00000560202 TMEM62Q0P6H9 643 aa12.25□□□□□ -0.45
USP3-218ENST00000560202 KIZQ2M2Z5 673 aa12.25□□□□□ -0.45
USP3-218ENST00000560202 FKBP15Q5T1M5 1219 aa12.25□□□□□ -0.45
USP3-218ENST00000560202 GDF6Q6KF10 455 aaPredicted RBP12.25□□□□□ -0.45
USP3-218ENST00000560202 TAF2Q6P1X5 1199 aa12.25□□□□□ -0.45
USP3-218ENST00000560202 NME8Q8N427 588 aa12.25□□□□□ -0.45
USP3-218ENST00000560202 ARRDC4Q8NCT1 418 aa12.25□□□□□ -0.45
USP3-218ENST00000560202 ZSWIM2Q8NEG5 633 aa12.25□□□□□ -0.45
USP3-218ENST00000560202 VTI1AQ96AJ9 217 aa12.25□□□□□ -0.45
USP3-218ENST00000560202 ZBTB45Q96K62 511 aaPredicted RBP12.25□□□□□ -0.45
USP3-218ENST00000560202 ACO2Q99798 780 aaKnown RBP12.25□□□□□ -0.45
USP3-218ENST00000560202 ADAMTS10Q9H324 1103 aa12.25□□□□□ -0.45
USP3-218ENST00000560202 PRMT7Q9NVM4 692 aaPredicted RBP12.25□□□□□ -0.45
USP3-218ENST00000560202 GRIN2DO15399 1336 aa12.25□□□□□ -0.45
USP3-218ENST00000560202 A0A1W2PQC6 194 aa12.24□□□□□ -0.45
USP3-218ENST00000560202 GOLGA8IPA6NC78 632 aa12.24□□□□□ -0.45
USP3-218ENST00000560202 GOLGA8JA6NMD2 632 aa12.24□□□□□ -0.45
USP3-218ENST00000560202 KIAA0391O15091 583 aaKnown RBP12.24□□□□□ -0.45
USP3-218ENST00000560202 MAPK13O15264 365 aa12.24□□□□□ -0.45
USP3-218ENST00000560202 GPR32O75388 356 aa12.24□□□□□ -0.45
USP3-218ENST00000560202 HSPA8P11142 646 aaKnown RBP12.24□□□□□ -0.45
USP3-218ENST00000560202 KCNH2Q12809 1159 aa12.24□□□□□ -0.45
USP3-218ENST00000560202 PRPF4BQ13523 1007 aaKnown RBP12.24□□□□□ -0.45
USP3-218ENST00000560202 FAM187BQ17R55 369 aa12.24□□□□□ -0.45
USP3-218ENST00000560202 CCDC186Q7Z3E2 898 aa12.24□□□□□ -0.45
USP3-218ENST00000560202 SRGAP1Q7Z6B7 1085 aa12.24□□□□□ -0.45
USP3-218ENST00000560202 GPD1LQ8N335 351 aa12.24□□□□□ -0.45
USP3-218ENST00000560202 SAAL1Q96ER3 474 aa12.24□□□□□ -0.45
USP3-218ENST00000560202 FBXL18Q96ME1 805 aa12.24□□□□□ -0.45
USP3-218ENST00000560202 GLT1D1Q96MS3 346 aa12.24□□□□□ -0.45
USP3-218ENST00000560202 HAPLN2Q9GZV7 340 aa12.24□□□□□ -0.45
USP3-218ENST00000560202 PAK6Q9NQU5 681 aaPredicted RBP12.24□□□□□ -0.45
USP3-218ENST00000560202 ANKFY1Q9P2R3 1169 aa12.24□□□□□ -0.45
USP3-218ENST00000560202 A0A0B4J269 797 aa12.23□□□□□ -0.45
USP3-218ENST00000560202 CLDN3O15551 220 aa12.23□□□□□ -0.45
USP3-218ENST00000560202 B4GALT5O43286 388 aa12.23□□□□□ -0.45
USP3-218ENST00000560202 EXTL3O43909 919 aa12.23□□□□□ -0.45
USP3-218ENST00000560202 CSDE1O75534 798 aaKnown RBP12.23□□□□□ -0.45
USP3-218ENST00000560202 TOM1L1O75674 476 aa12.23□□□□□ -0.45
USP3-218ENST00000560202 MYCP01106 439 aaPredicted RBP12.23□□□□□ -0.45
USP3-218ENST00000560202 AFPP02771 609 aaKnown RBP12.23□□□□□ -0.45
USP3-218ENST00000560202 KRT13P13646 458 aa12.23□□□□□ -0.45
USP3-218ENST00000560202 MATR3P43243 847 aaKnown RBP eCLIP12.23□□□□□ -0.45
USP3-218ENST00000560202 BFSP1Q12934 665 aa12.23□□□□□ -0.45
USP3-218ENST00000560202 ITGA7Q13683 1181 aa12.23□□□□□ -0.45
USP3-218ENST00000560202 MTFR1Q15390 333 aa12.23□□□□□ -0.45
USP3-218ENST00000560202 SNRNP35Q16560 246 aaKnown RBP12.23□□□□□ -0.45
USP3-218ENST00000560202 AMHR2Q16671 573 aa12.23□□□□□ -0.45
USP3-218ENST00000560202 DCAF17Q5H9S7 520 aaPredicted RBP12.23□□□□□ -0.45
USP3-218ENST00000560202 ATF7IP2Q5U623 682 aa12.23□□□□□ -0.45
USP3-218ENST00000560202 TCERG1LQ5VWI1 586 aa12.23□□□□□ -0.45
USP3-218ENST00000560202 TSHZ1Q6ZSZ6 1077 aa12.23□□□□□ -0.45
USP3-218ENST00000560202 INTS8Q75QN2 995 aaKnown RBP12.23□□□□□ -0.45
USP3-218ENST00000560202 CTU1Q7Z7A3 348 aaKnown RBP12.23□□□□□ -0.45
USP3-218ENST00000560202 CBWD2Q8IUF1 395 aa12.23□□□□□ -0.45
USP3-218ENST00000560202 ZNF710Q8N1W2 664 aa12.23□□□□□ -0.45
USP3-218ENST00000560202 SLC35C1Q96A29 364 aa12.23□□□□□ -0.45
USP3-218ENST00000560202 PRIMPOLQ96LW4 560 aa12.23□□□□□ -0.45
USP3-218ENST00000560202 ERGIC2Q96RQ1 377 aa12.23□□□□□ -0.45
USP3-218ENST00000560202 TCHPQ9BT92 498 aa12.23□□□□□ -0.45
USP3-218ENST00000560202 GCOM2Q9BZD3 368 aaPredicted RBP12.23□□□□□ -0.45
USP3-218ENST00000560202 KIAA1586Q9HCI6 787 aa12.23□□□□□ -0.45
USP3-218ENST00000560202 AGO2Q9UKV8 859 aaKnown RBP12.23□□□□□ -0.45
USP3-218ENST00000560202 GINS2Q9Y248 185 aa12.23□□□□□ -0.45
USP3-218ENST00000560202 ITIH6Q6UXX5 1313 aa12.23□□□□□ -0.45
USP3-218ENST00000560202 SCN10AQ9Y5Y9 1956 aa12.23□□□□□ -0.45
USP3-218ENST00000560202 SIP14410 1827 aa12.23□□□□□ -0.45
USP3-218ENST00000560202 UQCRHLA0A096LP55 91 aa12.22□□□□□ -0.45
USP3-218ENST00000560202 LDHAP00338 332 aaKnown RBP12.22□□□□□ -0.45
USP3-218ENST00000560202 ADRB2P07550 413 aa12.22□□□□□ -0.45
USP3-218ENST00000560202 UQCRHP07919 91 aa12.22□□□□□ -0.45
USP3-218ENST00000560202 CCL5P13501 91 aa12.22□□□□□ -0.45
USP3-218ENST00000560202 PTPN11Q06124 597 aaPredicted RBP12.22□□□□□ -0.45
USP3-218ENST00000560202 TBX2Q13207 712 aaPredicted RBP12.22□□□□□ -0.45
USP3-218ENST00000560202 SYCP1Q15431 976 aa12.22□□□□□ -0.45
USP3-218ENST00000560202 TMEM132AQ24JP5 1023 aa12.22□□□□□ -0.45
USP3-218ENST00000560202 SERINC5Q86VE9 423 aa12.22□□□□□ -0.45
USP3-218ENST00000560202 DEFB118Q96PH6 123 aa12.22□□□□□ -0.45
USP3-218ENST00000560202 FAM213AQ9BRX8 229 aa12.22□□□□□ -0.45
USP3-218ENST00000560202 MSTO1Q9BUK6 570 aa12.22□□□□□ -0.45
USP3-218ENST00000560202 RNF208Q9H0X6 261 aa12.22□□□□□ -0.45
USP3-218ENST00000560202 CDHR5Q9HBB8 845 aa12.22□□□□□ -0.45
USP3-218ENST00000560202 PTPRHQ9HD43 1115 aa12.22□□□□□ -0.45
USP3-218ENST00000560202 TNFSF13BQ9Y275 285 aa12.22□□□□□ -0.45
USP3-218ENST00000560202 CNTNAP2Q9UHC6 1331 aa12.22□□□□□ -0.45
USP3-218ENST00000560202 A0A1W2PQ45 241 aaPredicted RBP12.22□□□□□ -0.45
USP3-218ENST00000560202 A0A1W2PQY0 241 aa12.22□□□□□ -0.45
USP3-218ENST00000560202 ZNF233A6NK53 670 aa12.22□□□□□ -0.45
USP3-218ENST00000560202 KBTBD13C9JR72 458 aa12.22□□□□□ -0.45
USP3-218ENST00000560202 ABLIM1O14639 778 aa12.22□□□□□ -0.45
USP3-218ENST00000560202 DARSP14868 501 aaKnown RBP12.22□□□□□ -0.45
USP3-218ENST00000560202 PROZP22891 400 aa12.22□□□□□ -0.45
USP3-218ENST00000560202 VAMP7P51809 220 aa12.22□□□□□ -0.45
USP3-218ENST00000560202 GSDMDP57764 484 aa12.22□□□□□ -0.45
USP3-218ENST00000560202 MCCD1P59942 119 aaPredicted RBP12.22□□□□□ -0.45
USP3-218ENST00000560202 MCL1Q07820 350 aa12.22□□□□□ -0.45
USP3-218ENST00000560202 PTGISQ16647 500 aa12.22□□□□□ -0.45
USP3-218ENST00000560202 MPZL3Q6UWV2 235 aa12.22□□□□□ -0.45
USP3-218ENST00000560202 ZBTB33Q86T24 672 aa12.22□□□□□ -0.45
USP3-218ENST00000560202 RSPH3Q86UC2 560 aa12.22□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms