RNA–Protein interactions for RNA: ENST00000560127.1

RABGGTA-213, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 4

Gene RABGGTA, Length 573 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-213ENST00000560127 EPC1Q9H2F5 836 aa14.41□□□□□ -0.1
RABGGTA-213ENST00000560127 RSAD1Q9HA92 442 aa14.41□□□□□ -0.1
RABGGTA-213ENST00000560127 RBM28Q9NW13 759 aaKnown RBP14.41□□□□□ -0.1
RABGGTA-213ENST00000560127 ZSCAN32Q9NX65 697 aa14.41□□□□□ -0.1
RABGGTA-213ENST00000560127 KANSL3Q9P2N6 904 aa14.41□□□□□ -0.1
RABGGTA-213ENST00000560127 TGM5O43548 720 aa14.4□□□□□ -0.1
RABGGTA-213ENST00000560127 GAS2O43903 313 aaKnown RBP14.4□□□□□ -0.1
RABGGTA-213ENST00000560127 STBD1O95210 358 aa14.4□□□□□ -0.1
RABGGTA-213ENST00000560127 DSG1Q02413 1049 aa14.4□□□□□ -0.1
RABGGTA-213ENST00000560127 MLF2Q15773 248 aaPredicted RBP14.4□□□□□ -0.1
RABGGTA-213ENST00000560127 RTN1Q16799 776 aa14.4□□□□□ -0.1
RABGGTA-213ENST00000560127 APOA5Q6Q788 366 aa14.4□□□□□ -0.1
RABGGTA-213ENST00000560127 PARM1Q6UWI2 310 aa14.4□□□□□ -0.1
RABGGTA-213ENST00000560127 PALB2Q86YC2 1186 aa14.4□□□□□ -0.1
RABGGTA-213ENST00000560127 RHPN2Q8IUC4 686 aa14.4□□□□□ -0.1
RABGGTA-213ENST00000560127 COLGALT2Q8IYK4 626 aa14.4□□□□□ -0.1
RABGGTA-213ENST00000560127 PHKBQ93100 1093 aa14.4□□□□□ -0.1
RABGGTA-213ENST00000560127 SH2D3AQ9BRG2 576 aa14.4□□□□□ -0.1
RABGGTA-213ENST00000560127 NIFKQ9BYG3 293 aaKnown RBP14.4□□□□□ -0.1
RABGGTA-213ENST00000560127 PLEKHA4Q9H4M7 779 aa14.4□□□□□ -0.1
RABGGTA-213ENST00000560127 PARD6AQ9NPB6 346 aa14.4□□□□□ -0.1
RABGGTA-213ENST00000560127 AGPAT5Q9NUQ2 364 aa14.4□□□□□ -0.1
RABGGTA-213ENST00000560127 ZDHHC7Q9NXF8 308 aa14.4□□□□□ -0.1
RABGGTA-213ENST00000560127 SUCLA2Q9P2R7 463 aaPredicted RBP14.4□□□□□ -0.1
RABGGTA-213ENST00000560127 SEPT9Q9UHD8 586 aaPredicted RBP14.4□□□□□ -0.1
RABGGTA-213ENST00000560127 VWA8A3KMH1 1905 aa14.4□□□□□ -0.1
RABGGTA-213ENST00000560127 CNTNAP2Q9UHC6 1331 aa14.4□□□□□ -0.1
RABGGTA-213ENST00000560127 ASPMQ8IZT6 3477 aa14.39□□□□□ -0.11
RABGGTA-213ENST00000560127 FAM170BA6NMN3 283 aa14.39□□□□□ -0.11
RABGGTA-213ENST00000560127 F8W810 466 aa14.39□□□□□ -0.11
RABGGTA-213ENST00000560127 MSH4O15457 936 aa14.39□□□□□ -0.11
RABGGTA-213ENST00000560127 CHMP2AO43633 222 aa14.39□□□□□ -0.11
RABGGTA-213ENST00000560127 EDIL3O43854 480 aa14.39□□□□□ -0.11
RABGGTA-213ENST00000560127 C1RP00736 705 aa14.39□□□□□ -0.11
RABGGTA-213ENST00000560127 DNM2P50570 870 aa14.39□□□□□ -0.11
RABGGTA-213ENST00000560127 PRKCQQ04759 706 aa14.39□□□□□ -0.11
RABGGTA-213ENST00000560127 UBXN2BQ14CS0 331 aa14.39□□□□□ -0.11
RABGGTA-213ENST00000560127 SLC44A4Q53GD3 710 aa14.39□□□□□ -0.11
RABGGTA-213ENST00000560127 UBXN11Q5T124 520 aa14.39□□□□□ -0.11
RABGGTA-213ENST00000560127 LILRA6Q6PI73 481 aa14.39□□□□□ -0.11
RABGGTA-213ENST00000560127 SYNE3Q6ZMZ3 975 aa14.39□□□□□ -0.11
RABGGTA-213ENST00000560127 SECISBP2LQ93073 1101 aaKnown RBP14.39□□□□□ -0.11
RABGGTA-213ENST00000560127 OSBPL6Q9BZF3 934 aa14.39□□□□□ -0.11
RABGGTA-213ENST00000560127 IFT122Q9HBG6 1241 aa14.39□□□□□ -0.11
RABGGTA-213ENST00000560127 CHST7Q9NS84 486 aa14.39□□□□□ -0.11
RABGGTA-213ENST00000560127 BRPF3Q9ULD4 1205 aa14.39□□□□□ -0.11
RABGGTA-213ENST00000560127 USP18Q9UMW8 372 aa14.39□□□□□ -0.11
RABGGTA-213ENST00000560127 ZFP37Q9Y6Q3 630 aaPredicted RBP14.39□□□□□ -0.11
RABGGTA-213ENST00000560127 SLC27A2O14975 620 aa14.38□□□□□ -0.11
RABGGTA-213ENST00000560127 CD72P21854 359 aa14.38□□□□□ -0.11
RABGGTA-213ENST00000560127 FSHRP23945 695 aa14.38□□□□□ -0.11
RABGGTA-213ENST00000560127 OR1G1P47890 313 aa14.38□□□□□ -0.11
RABGGTA-213ENST00000560127 TSSK4Q6SA08 328 aa14.38□□□□□ -0.11
RABGGTA-213ENST00000560127 GJA10Q969M2 543 aa14.38□□□□□ -0.11
RABGGTA-213ENST00000560127 B3GALT6Q96L58 329 aa14.38□□□□□ -0.11
RABGGTA-213ENST00000560127 NLRP4Q96MN2 994 aa14.38□□□□□ -0.11
RABGGTA-213ENST00000560127 LSG1Q9H089 658 aaKnown RBP14.38□□□□□ -0.11
RABGGTA-213ENST00000560127 ZMYND12Q9H0C1 365 aa14.38□□□□□ -0.11
RABGGTA-213ENST00000560127 UNC45AQ9H3U1 944 aa14.38□□□□□ -0.11
RABGGTA-213ENST00000560127 LTB4R2Q9NPC1 389 aa14.38□□□□□ -0.11
RABGGTA-213ENST00000560127 FAM217BQ9NTX9 383 aaPredicted RBP14.38□□□□□ -0.11
RABGGTA-213ENST00000560127 IGF2RP11717 2491 aa14.38□□□□□ -0.11
RABGGTA-213ENST00000560127 ARID2Q68CP9 1835 aa14.38□□□□□ -0.11
RABGGTA-213ENST00000560127 LAMA1P25391 3075 aa14.38□□□□□ -0.11
RABGGTA-213ENST00000560127 TRIP11Q15643 1979 aa14.37□□□□□ -0.11
RABGGTA-213ENST00000560127 ESYT2A0FGR8 921 aa14.37□□□□□ -0.11
RABGGTA-213ENST00000560127 ZBTB43O43298 467 aa14.37□□□□□ -0.11
RABGGTA-213ENST00000560127 MAFO75444 373 aaPredicted RBP14.37□□□□□ -0.11
RABGGTA-213ENST00000560127 ZMYND10O75800 440 aa14.37□□□□□ -0.11
RABGGTA-213ENST00000560127 NCLP19338 710 aaKnown RBP14.37□□□□□ -0.11
RABGGTA-213ENST00000560127 HOXA11P31270 313 aaPredicted RBP14.37□□□□□ -0.11
RABGGTA-213ENST00000560127 SFNP31947 248 aa14.37□□□□□ -0.11
RABGGTA-213ENST00000560127 MAGEA9P43362 315 aa14.37□□□□□ -0.11
RABGGTA-213ENST00000560127 JAK3P52333 1124 aa14.37□□□□□ -0.11
RABGGTA-213ENST00000560127 NTHL1P78549 312 aa14.37□□□□□ -0.11
RABGGTA-213ENST00000560127 DSC1Q08554 894 aa14.37□□□□□ -0.11
RABGGTA-213ENST00000560127 PFKFB3Q16875 520 aaPredicted RBP14.37□□□□□ -0.11
RABGGTA-213ENST00000560127 XKR3Q5GH77 459 aa14.37□□□□□ -0.11
RABGGTA-213ENST00000560127 GLYCTKQ8IVS8 523 aa14.37□□□□□ -0.11
RABGGTA-213ENST00000560127 REXO1Q8N1G1 1221 aaKnown RBP14.37□□□□□ -0.11
RABGGTA-213ENST00000560127 SLC5A5Q92911 643 aa14.37□□□□□ -0.11
RABGGTA-213ENST00000560127 CLDN23Q96B33 292 aa14.37□□□□□ -0.11
RABGGTA-213ENST00000560127 RIT2Q99578 217 aa14.37□□□□□ -0.11
RABGGTA-213ENST00000560127 PRMT8Q9NR22 394 aaPredicted RBP14.37□□□□□ -0.11
RABGGTA-213ENST00000560127 CDH7Q9ULB5 785 aa14.37□□□□□ -0.11
RABGGTA-213ENST00000560127 TBC1D4O60343 1298 aa14.36□□□□□ -0.11
RABGGTA-213ENST00000560127 GAS7O60861 476 aa14.36□□□□□ -0.11
RABGGTA-213ENST00000560127 RPL17P18621 184 aaKnown RBP14.36□□□□□ -0.11
RABGGTA-213ENST00000560127 CDC27P30260 824 aa14.36□□□□□ -0.11
RABGGTA-213ENST00000560127 LRCH2Q5VUJ6 765 aa14.36□□□□□ -0.11
RABGGTA-213ENST00000560127 CREB3L3Q68CJ9 461 aa14.36□□□□□ -0.11
RABGGTA-213ENST00000560127 RSPO2Q6UXX9 243 aaPredicted RBP14.36□□□□□ -0.11
RABGGTA-213ENST00000560127 GRASPQ7Z6J2 395 aaPredicted RBP14.36□□□□□ -0.11
RABGGTA-213ENST00000560127 SMG8Q8ND04 991 aaKnown RBP14.36□□□□□ -0.11
RABGGTA-213ENST00000560127 MBOAT7Q96N66 472 aa14.36□□□□□ -0.11
RABGGTA-213ENST00000560127 GPR62Q9BZJ7 368 aa14.36□□□□□ -0.11
RABGGTA-213ENST00000560127 MINDY3Q9H8M7 445 aa14.36□□□□□ -0.11
RABGGTA-213ENST00000560127 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP14.36□□□□□ -0.11
RABGGTA-213ENST00000560127 MIOSQ9NXC5 875 aa14.36□□□□□ -0.11
RABGGTA-213ENST00000560127 FNIP2Q9P278 1114 aa14.36□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms