RNA–Protein interactions for RNA: ENST00000559819.5

LRRC28-216, Transcript of leucine rich repeat containing 28, humanhuman

TSL 2

Gene LRRC28, Length 2,712 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-216ENST00000559819 RFX1P22670 979 aa10.83□□□□□ -0.68
LRRC28-216ENST00000559819 MAGEA9P43362 315 aa10.83□□□□□ -0.68
LRRC28-216ENST00000559819 NCKAP1LP55160 1127 aa10.83□□□□□ -0.68
LRRC28-216ENST00000559819 CETN1Q12798 172 aa10.83□□□□□ -0.68
LRRC28-216ENST00000559819 LLGL1Q15334 1064 aa10.83□□□□□ -0.68
LRRC28-216ENST00000559819 UBAP2Q5T6F2 1119 aaKnown RBP10.83□□□□□ -0.68
LRRC28-216ENST00000559819 FKBP1CQ5VVH2 108 aa10.83□□□□□ -0.68
LRRC28-216ENST00000559819 NIPA1Q7RTP0 329 aa10.83□□□□□ -0.68
LRRC28-216ENST00000559819 RHOT2Q8IXI1 618 aa10.83□□□□□ -0.68
LRRC28-216ENST00000559819 C12orf56Q8IXR9 622 aa10.83□□□□□ -0.68
LRRC28-216ENST00000559819 NIM1KQ8IY84 436 aa10.83□□□□□ -0.68
LRRC28-216ENST00000559819 EPS8L1Q8TE68 723 aa10.83□□□□□ -0.68
LRRC28-216ENST00000559819 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP10.83□□□□□ -0.682e-7■■■■■ 64.2
LRRC28-216ENST00000559819 SEC14L1Q92503 715 aa10.83□□□□□ -0.68
LRRC28-216ENST00000559819 DHX38Q92620 1227 aaKnown RBP10.83□□□□□ -0.68
LRRC28-216ENST00000559819 FAM107BQ9H098 131 aa10.83□□□□□ -0.68
LRRC28-216ENST00000559819 FAM114A2Q9NRY5 505 aa10.83□□□□□ -0.68
LRRC28-216ENST00000559819 STK32BQ9NY57 414 aa10.83□□□□□ -0.68
LRRC28-216ENST00000559819 NOCTQ9UK39 431 aaKnown RBP10.83□□□□□ -0.68
LRRC28-216ENST00000559819 ZNRF3Q9ULT6 936 aa10.83□□□□□ -0.68
LRRC28-216ENST00000559819 TCRBV7S2A1N4TA0A589 114 aa10.83□□□□□ -0.68
LRRC28-216ENST00000559819 KCNA3P22001 575 aa10.83□□□□□ -0.68
LRRC28-216ENST00000559819 TMOD1P28289 359 aa10.83□□□□□ -0.68
LRRC28-216ENST00000559819 MDH1P40925 334 aaKnown RBP10.83□□□□□ -0.68
LRRC28-216ENST00000559819 GPC5P78333 572 aa10.83□□□□□ -0.68
LRRC28-216ENST00000559819 MTMR2Q13614 643 aa10.83□□□□□ -0.68
LRRC28-216ENST00000559819 ALCAMQ13740 583 aa10.83□□□□□ -0.68
LRRC28-216ENST00000559819 SNRNP35Q16560 246 aaKnown RBP10.83□□□□□ -0.68
LRRC28-216ENST00000559819 PTGISQ16647 500 aa10.83□□□□□ -0.68
LRRC28-216ENST00000559819 ZBED3Q96IU2 234 aaPredicted RBP10.83□□□□□ -0.68
LRRC28-216ENST00000559819 RMDN3Q96TC7 470 aa10.83□□□□□ -0.68
LRRC28-216ENST00000559819 MYOZ2Q9NPC6 264 aa10.83□□□□□ -0.68
LRRC28-216ENST00000559819 CNOT8Q9UFF9 292 aaKnown RBP10.83□□□□□ -0.68
LRRC28-216ENST00000559819 TCEAL9Q9UHQ7 104 aa10.83□□□□□ -0.68
LRRC28-216ENST00000559819 TBX20Q9UMR3 447 aa10.83□□□□□ -0.68
LRRC28-216ENST00000559819 P4HA2O15460 535 aa10.82□□□□□ -0.68
LRRC28-216ENST00000559819 RTN2O75298 545 aa10.82□□□□□ -0.68
LRRC28-216ENST00000559819 LYPLA2O95372 231 aa10.82□□□□□ -0.68
LRRC28-216ENST00000559819 NPTX2P47972 431 aa10.82□□□□□ -0.68
LRRC28-216ENST00000559819 FMO1Q01740 532 aa10.82□□□□□ -0.68
LRRC28-216ENST00000559819 SP4Q02446 784 aa10.82□□□□□ -0.68
LRRC28-216ENST00000559819 MKRN4PQ13434 485 aaPredicted RBP10.82□□□□□ -0.68
LRRC28-216ENST00000559819 DUPD1Q68J44 220 aa10.82□□□□□ -0.68
LRRC28-216ENST00000559819 TTC27Q6P3X3 843 aa10.82□□□□□ -0.68
LRRC28-216ENST00000559819 SLC39A4Q6P5W5 647 aa10.82□□□□□ -0.68
LRRC28-216ENST00000559819 ANO5Q75V66 913 aa10.82□□□□□ -0.68
LRRC28-216ENST00000559819 JAMLQ86YT9 394 aa10.82□□□□□ -0.68
LRRC28-216ENST00000559819 MTMR14Q8NCE2 650 aa10.82□□□□□ -0.68
LRRC28-216ENST00000559819 ZSWIM1Q9BR11 485 aa10.82□□□□□ -0.68
LRRC28-216ENST00000559819 PDCD2LQ9BRP1 358 aa10.82□□□□□ -0.68
LRRC28-216ENST00000559819 PPANQ9NQ55 473 aaKnown RBP10.82□□□□□ -0.68
LRRC28-216ENST00000559819 PXMP2Q9NR77 195 aa10.82□□□□□ -0.68
LRRC28-216ENST00000559819 TBC1D22BQ9NU19 505 aa10.82□□□□□ -0.68
LRRC28-216ENST00000559819 NOVA2Q9UNW9 492 aaKnown RBP10.82□□□□□ -0.68
LRRC28-216ENST00000559819 USP20Q9Y2K6 914 aa10.82□□□□□ -0.68
LRRC28-216ENST00000559819 DAAM1Q9Y4D1 1078 aa10.82□□□□□ -0.68
LRRC28-216ENST00000559819 RIPK3Q9Y572 518 aa10.82□□□□□ -0.68
LRRC28-216ENST00000559819 GOLGA6L10A0A0M3HER8 536 aa10.82□□□□□ -0.68
LRRC28-216ENST00000559819 PYGMP11217 842 aa10.82□□□□□ -0.68
LRRC28-216ENST00000559819 PTGIRP43119 386 aa10.82□□□□□ -0.68
LRRC28-216ENST00000559819 LIG3P49916 1009 aa10.82□□□□□ -0.68
LRRC28-216ENST00000559819 PSMC5P62195 406 aa10.82□□□□□ -0.68
LRRC28-216ENST00000559819 MAP3K10Q02779 954 aa10.82□□□□□ -0.68
LRRC28-216ENST00000559819 ARHGEF16Q5VV41 709 aa10.82□□□□□ -0.68
LRRC28-216ENST00000559819 C11orf63Q6NUN7 778 aa10.82□□□□□ -0.68
LRRC28-216ENST00000559819 PACS2Q86VP3 889 aa10.82□□□□□ -0.68
LRRC28-216ENST00000559819 FMNL3Q8IVF7 1028 aa10.82□□□□□ -0.68
LRRC28-216ENST00000559819 C4orf19Q8IY42 314 aa10.82□□□□□ -0.68
LRRC28-216ENST00000559819 FAM71AQ8IYT1 594 aa10.82□□□□□ -0.68
LRRC28-216ENST00000559819 PRELID2Q8N945 189 aa10.82□□□□□ -0.68
LRRC28-216ENST00000559819 TMEM161BQ8NDZ6 487 aa10.82□□□□□ -0.68
LRRC28-216ENST00000559819 AGBL3Q8NEM8 1001 aa10.82□□□□□ -0.68
LRRC28-216ENST00000559819 TAS1R2Q8TE23 839 aa10.82□□□□□ -0.68
LRRC28-216ENST00000559819 ZNF473Q8WTR7 871 aaKnown RBP10.82□□□□□ -0.68
LRRC28-216ENST00000559819 ATG4CQ96DT6 458 aa10.82□□□□□ -0.68
LRRC28-216ENST00000559819 TEPSINQ96N21 525 aa10.82□□□□□ -0.68
LRRC28-216ENST00000559819 FMO2Q99518 471 aa10.82□□□□□ -0.68
LRRC28-216ENST00000559819 ERP44Q9BS26 406 aa10.82□□□□□ -0.68
LRRC28-216ENST00000559819 EPN3Q9H201 632 aa10.82□□□□□ -0.68
LRRC28-216ENST00000559819 RPAP3Q9H6T3 665 aaPredicted RBP10.82□□□□□ -0.68
LRRC28-216ENST00000559819 ZDHHC18Q9NUE0 388 aa10.82□□□□□ -0.68
LRRC28-216ENST00000559819 FZD1Q9UP38 647 aa10.82□□□□□ -0.68
LRRC28-216ENST00000559819 DIS3Q9Y2L1 958 aaKnown RBP10.82□□□□□ -0.68
LRRC28-216ENST00000559819 CTDP1Q9Y5B0 961 aaPredicted RBP10.82□□□□□ -0.68
LRRC28-216ENST00000559819 DENND3A2RUS2 1198 aa10.81□□□□□ -0.68
LRRC28-216ENST00000559819 SHBGP04278 402 aa10.81□□□□□ -0.68
LRRC28-216ENST00000559819 PLTPP55058 493 aa10.81□□□□□ -0.68
LRRC28-216ENST00000559819 KRT71Q3SY84 523 aa10.81□□□□□ -0.68
LRRC28-216ENST00000559819 EMC10Q5UCC4 262 aa10.81□□□□□ -0.68
LRRC28-216ENST00000559819 ZDHHC24Q6UX98 284 aa10.81□□□□□ -0.68
LRRC28-216ENST00000559819 RNF207Q6ZRF8 634 aa10.81□□□□□ -0.68
LRRC28-216ENST00000559819 PHLDB2Q86SQ0 1253 aa10.81□□□□□ -0.68
LRRC28-216ENST00000559819 NLRP14Q86W24 1093 aa10.81□□□□□ -0.68
LRRC28-216ENST00000559819 C1orf131Q8NDD1 294 aaKnown RBP10.81□□□□□ -0.68
LRRC28-216ENST00000559819 HELQQ8TDG4 1101 aa10.81□□□□□ -0.68
LRRC28-216ENST00000559819 TATDN2Q93075 761 aa10.81□□□□□ -0.68
LRRC28-216ENST00000559819 PI4K2AQ9BTU6 479 aa10.81□□□□□ -0.68
LRRC28-216ENST00000559819 NUP85Q9BW27 656 aa10.81□□□□□ -0.68
LRRC28-216ENST00000559819 RAB17Q9H0T7 212 aa10.81□□□□□ -0.68
LRRC28-216ENST00000559819 TRPC6Q9Y210 931 aa10.81□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms