RNA–Protein interactions for RNA: ENST00000559694.5

CARMIL3-202, Transcript of capping protein regulator and myosin 1 linker 3, humanhuman

TSL 5

Gene CARMIL3, Length 4,319 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CARMIL3-202ENST00000559694 KRT39Q6A163 491 aa11.44□□□□□ -0.58
CARMIL3-202ENST00000559694 TEX2Q8IWB9 1127 aa11.44□□□□□ -0.58
CARMIL3-202ENST00000559694 ADAMTS1Q9UHI8 967 aa11.44□□□□□ -0.58
CARMIL3-202ENST00000559694 POLIQ9UNA4 740 aa11.44□□□□□ -0.58
CARMIL3-202ENST00000559694 EMSYQ7Z589 1322 aa11.44□□□□□ -0.58
CARMIL3-202ENST00000559694 SLC15A5A6NIM6 579 aa11.44□□□□□ -0.58
CARMIL3-202ENST00000559694 CSDE1O75534 798 aaKnown RBP11.44□□□□□ -0.58
CARMIL3-202ENST00000559694 KCNJ6P48051 423 aa11.44□□□□□ -0.58
CARMIL3-202ENST00000559694 PSMC6P62333 389 aa11.44□□□□□ -0.58
CARMIL3-202ENST00000559694 BEX3Q00994 111 aa11.44□□□□□ -0.58
CARMIL3-202ENST00000559694 MAP2K5Q13163 448 aa11.44□□□□□ -0.58
CARMIL3-202ENST00000559694 GJC2Q5T442 439 aaPredicted RBP11.44□□□□□ -0.58
CARMIL3-202ENST00000559694 OTOP1Q7RTM1 612 aa11.44□□□□□ -0.58
CARMIL3-202ENST00000559694 ADSSL1Q8N142 457 aa11.44□□□□□ -0.58
CARMIL3-202ENST00000559694 PRMT7Q9NVM4 692 aaPredicted RBP11.44□□□□□ -0.58
CARMIL3-202ENST00000559694 HSPBP1Q9NZL4 362 aa11.44□□□□□ -0.58
CARMIL3-202ENST00000559694 AMFRQ9UKV5 643 aa11.44□□□□□ -0.58
CARMIL3-202ENST00000559694 NKRFO15226 690 aaKnown RBP eCLIP11.44□□□□□ -0.58
CARMIL3-202ENST00000559694 VTNP04004 478 aa11.44□□□□□ -0.58
CARMIL3-202ENST00000559694 ZNF484Q5JVG2 852 aa11.44□□□□□ -0.58
CARMIL3-202ENST00000559694 NYAP1Q6ZVC0 841 aa11.44□□□□□ -0.58
CARMIL3-202ENST00000559694 SYCE1Q8N0S2 351 aa11.44□□□□□ -0.58
CARMIL3-202ENST00000559694 SPEF2Q9C093 1822 aa11.44□□□□□ -0.58
CARMIL3-202ENST00000559694 LGALS16A8MUM7 142 aa11.44□□□□□ -0.58
CARMIL3-202ENST00000559694 SLC26A4O43511 780 aa11.44□□□□□ -0.58
CARMIL3-202ENST00000559694 FKTNO75072 461 aa11.44□□□□□ -0.58
CARMIL3-202ENST00000559694 SEMA3FQ13275 785 aa11.44□□□□□ -0.58
CARMIL3-202ENST00000559694 ATF7IP2Q5U623 682 aa11.44□□□□□ -0.58
CARMIL3-202ENST00000559694 IQSEC1Q6DN90 963 aa11.44□□□□□ -0.58
CARMIL3-202ENST00000559694 TMEM270Q6UE05 265 aa11.44□□□□□ -0.58
CARMIL3-202ENST00000559694 SPATS2Q86XZ4 545 aaKnown RBP11.44□□□□□ -0.58
CARMIL3-202ENST00000559694 KCTD17Q8N5Z5 321 aa11.44□□□□□ -0.58
CARMIL3-202ENST00000559694 TRIM58Q8NG06 486 aa11.44□□□□□ -0.58
CARMIL3-202ENST00000559694 IL31RAQ8NI17 732 aa11.44□□□□□ -0.58
CARMIL3-202ENST00000559694 WDR24Q96S15 920 aa11.44□□□□□ -0.58
CARMIL3-202ENST00000559694 TTLL3Q9Y4R7 772 aa11.44□□□□□ -0.58
CARMIL3-202ENST00000559694 TACC3Q9Y6A5 838 aa11.44□□□□□ -0.58
CARMIL3-202ENST00000559694 TMEM150BA6NC51 233 aa11.43□□□□□ -0.58
CARMIL3-202ENST00000559694 PGK1P00558 417 aa11.43□□□□□ -0.58
CARMIL3-202ENST00000559694 SLC26A2P50443 739 aa11.43□□□□□ -0.58
CARMIL3-202ENST00000559694 IFT88Q13099 833 aa11.43□□□□□ -0.58
CARMIL3-202ENST00000559694 MESDQ14696 234 aa11.43□□□□□ -0.58
CARMIL3-202ENST00000559694 FAM110CQ1W6H9 321 aa11.43□□□□□ -0.58
CARMIL3-202ENST00000559694 RPAINQ86UA6 219 aa11.43□□□□□ -0.58
CARMIL3-202ENST00000559694 C4orf19Q8IY42 314 aa11.43□□□□□ -0.58
CARMIL3-202ENST00000559694 TRAPPC12Q8WVT3 735 aa11.43□□□□□ -0.58
CARMIL3-202ENST00000559694 ZNF653Q96CK0 615 aa11.43□□□□□ -0.58
CARMIL3-202ENST00000559694 PORCNQ9H237 461 aa11.43□□□□□ -0.58
CARMIL3-202ENST00000559694 PLCH1Q4KWH8 1693 aa11.43□□□□□ -0.58
CARMIL3-202ENST00000559694 EML1O00423 815 aa11.43□□□□□ -0.58
CARMIL3-202ENST00000559694 HGSO14964 777 aaPredicted RBP11.43□□□□□ -0.58
CARMIL3-202ENST00000559694 SNHG28P0DPA3 235 aa11.43□□□□□ -0.58
CARMIL3-202ENST00000559694 RFX1P22670 979 aa11.43□□□□□ -0.58
CARMIL3-202ENST00000559694 EIF4A3P38919 411 aaKnown RBP11.43□□□□□ -0.58
CARMIL3-202ENST00000559694 SOX10P56693 466 aa11.43□□□□□ -0.58
CARMIL3-202ENST00000559694 CYP27A1Q02318 531 aa11.43□□□□□ -0.58
CARMIL3-202ENST00000559694 WDR72Q3MJ13 1102 aa11.43□□□□□ -0.58
CARMIL3-202ENST00000559694 ILDR2Q71H61 639 aa11.43□□□□□ -0.58
CARMIL3-202ENST00000559694 SCN4BQ8IWT1 228 aa11.43□□□□□ -0.58
CARMIL3-202ENST00000559694 NAP1L3Q99457 506 aaPredicted RBP11.43□□□□□ -0.58
CARMIL3-202ENST00000559694 TRIM31Q9BZY9 425 aa11.43□□□□□ -0.58
CARMIL3-202ENST00000559694 STMN4Q9H169 189 aaPredicted RBP11.43□□□□□ -0.58
CARMIL3-202ENST00000559694 MTIF3Q9H2K0 278 aaKnown RBP11.43□□□□□ -0.58
CARMIL3-202ENST00000559694 IGSF9BQ9UPX0 1349 aa11.43□□□□□ -0.58
CARMIL3-202ENST00000559694 MED7O43513 233 aa11.43□□□□□ -0.58
CARMIL3-202ENST00000559694 C4BP0C0L5 1744 aa11.43□□□□□ -0.58
CARMIL3-202ENST00000559694 HADHQ16836 314 aaKnown RBP11.43□□□□□ -0.58
CARMIL3-202ENST00000559694 OR6B2Q6IFH4 312 aa11.43□□□□□ -0.58
CARMIL3-202ENST00000559694 ANKRD23Q86SG2 305 aa11.43□□□□□ -0.58
CARMIL3-202ENST00000559694 CCDC25Q86WR0 208 aa11.43□□□□□ -0.58
CARMIL3-202ENST00000559694 ENGASEQ8NFI3 743 aa11.43□□□□□ -0.58
CARMIL3-202ENST00000559694 ATP8B4Q8TF62 1192 aa11.43□□□□□ -0.58
CARMIL3-202ENST00000559694 FUCA2Q9BTY2 467 aa11.43□□□□□ -0.58
CARMIL3-202ENST00000559694 TMEM51Q9NW97 253 aa11.43□□□□□ -0.58
CARMIL3-202ENST00000559694 C10orf71Q711Q0 1435 aa11.42□□□□□ -0.58
CARMIL3-202ENST00000559694 ZC3H4Q9UPT8 1303 aaKnown RBP11.42□□□□□ -0.58
CARMIL3-202ENST00000559694 FSCN1Q16658 493 aaKnown RBP11.42□□□□□ -0.58
CARMIL3-202ENST00000559694 PPP1R13LQ8WUF5 828 aa11.42□□□□□ -0.58
CARMIL3-202ENST00000559694 AGAP1Q9UPQ3 857 aa11.42□□□□□ -0.58
CARMIL3-202ENST00000559694 ATP11BQ9Y2G3 1177 aa11.42□□□□□ -0.58
CARMIL3-202ENST00000559694 COMMD10Q9Y6G5 202 aa11.42□□□□□ -0.58
CARMIL3-202ENST00000559694 ROBO3Q96MS0 1386 aa11.42□□□□□ -0.58
CARMIL3-202ENST00000559694 TEX33O43247 280 aa11.42□□□□□ -0.58
CARMIL3-202ENST00000559694 GAS2O43903 313 aaKnown RBP11.42□□□□□ -0.58
CARMIL3-202ENST00000559694 SLITRK3O94933 977 aa11.42□□□□□ -0.58
CARMIL3-202ENST00000559694 UBA1P22314 1058 aaKnown RBP11.42□□□□□ -0.58
CARMIL3-202ENST00000559694 FUT2Q10981 343 aa11.42□□□□□ -0.58
CARMIL3-202ENST00000559694 KRT71Q3SY84 523 aa11.42□□□□□ -0.58
CARMIL3-202ENST00000559694 CXCL17Q6UXB2 119 aa11.42□□□□□ -0.58
CARMIL3-202ENST00000559694 ZNF365Q70YC5 407 aa11.42□□□□□ -0.58
CARMIL3-202ENST00000559694 THEM5Q8N1Q8 247 aa11.42□□□□□ -0.58
CARMIL3-202ENST00000559694 FBXL13Q8NEE6 735 aa11.42□□□□□ -0.58
CARMIL3-202ENST00000559694 CCDC26Q8TAB7 109 aa11.42□□□□□ -0.58
CARMIL3-202ENST00000559694 KCNK9Q9NPC2 374 aa11.42□□□□□ -0.58
CARMIL3-202ENST00000559694 IKBKGQ9Y6K9 419 aa11.42□□□□□ -0.58
CARMIL3-202ENST00000559694 CRYBG1Q9Y4K1 1723 aa11.42□□□□□ -0.58
CARMIL3-202ENST00000559694 ATP2A1O14983 1001 aa11.42□□□□□ -0.58
CARMIL3-202ENST00000559694 ZBTB39O15060 712 aa11.42□□□□□ -0.58
CARMIL3-202ENST00000559694 PLA2G6O60733 806 aa11.42□□□□□ -0.58
CARMIL3-202ENST00000559694 GCKP35557 465 aa11.42□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms