RNA–Protein interactions for RNA: ENST00000559658.5

CHRNA3-206, Transcript of cholinergic receptor nicotinic alpha 3 subunit, humanhuman

TSL 2

Gene CHRNA3, Length 1,889 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA3-206ENST00000559658 ASAP2O43150 1006 aa18.92■□□□□ 0.62
CHRNA3-206ENST00000559658 TPM3P06753 285 aa18.92■□□□□ 0.62
CHRNA3-206ENST00000559658 PHKA2P46019 1235 aa18.92■□□□□ 0.62
CHRNA3-206ENST00000559658 TBX2Q13207 712 aaPredicted RBP18.92■□□□□ 0.62
CHRNA3-206ENST00000559658 SYCP1Q15431 976 aa18.92■□□□□ 0.62
CHRNA3-206ENST00000559658 SLC9C1Q4G0N8 1177 aa18.92■□□□□ 0.62
CHRNA3-206ENST00000559658 C1orf220Q5T0J3 134 aa18.92■□□□□ 0.62
CHRNA3-206ENST00000559658 TCERG1LQ5VWI1 586 aa18.92■□□□□ 0.62
CHRNA3-206ENST00000559658 ZBTB33Q86T24 672 aa18.92■□□□□ 0.62
CHRNA3-206ENST00000559658 RNF180Q86T96 592 aa18.92■□□□□ 0.62
CHRNA3-206ENST00000559658 ACO2Q99798 780 aaKnown RBP18.92■□□□□ 0.62
CHRNA3-206ENST00000559658 C2orf40Q9H1Z8 148 aa18.92■□□□□ 0.62
CHRNA3-206ENST00000559658 MMRN2Q9H8L6 949 aa18.92■□□□□ 0.62
CHRNA3-206ENST00000559658 FRMD4BQ9Y2L6 1034 aa18.92■□□□□ 0.62
CHRNA3-206ENST00000559658 STYXL1Q9Y6J8 313 aa18.92■□□□□ 0.62
CHRNA3-206ENST00000559658 KCNH2Q12809 1159 aa18.91■□□□□ 0.62
CHRNA3-206ENST00000559658 SNRNP35Q16560 246 aaKnown RBP18.91■□□□□ 0.62
CHRNA3-206ENST00000559658 TMEM174Q8WUU8 243 aa18.91■□□□□ 0.62
CHRNA3-206ENST00000559658 CPB2Q96IY4 423 aa18.91■□□□□ 0.62
CHRNA3-206ENST00000559658 FAM213AQ9BRX8 229 aa18.91■□□□□ 0.62
CHRNA3-206ENST00000559658 CRACR2AQ9BSW2 395 aa18.91■□□□□ 0.62
CHRNA3-206ENST00000559658 MKNK1Q9BUB5 465 aa18.91■□□□□ 0.62
CHRNA3-206ENST00000559658 MRPL4Q9BYD3 311 aaKnown RBP18.91■□□□□ 0.62
CHRNA3-206ENST00000559658 NFKBIZQ9BYH8 718 aa18.91■□□□□ 0.62
CHRNA3-206ENST00000559658 TULP1O00294 542 aaPredicted RBP18.9■□□□□ 0.62
CHRNA3-206ENST00000559658 FAM189A1O60320 539 aa18.9■□□□□ 0.62
CHRNA3-206ENST00000559658 GYPCP04921 128 aa18.9■□□□□ 0.62
CHRNA3-206ENST00000559658 ACOT2P49753 483 aa18.9■□□□□ 0.62
CHRNA3-206ENST00000559658 MYBPC2Q14324 1141 aa18.9■□□□□ 0.62
CHRNA3-206ENST00000559658 CRELD2Q6UXH1 353 aaPredicted RBP18.9■□□□□ 0.62
CHRNA3-206ENST00000559658 IFNLR1Q8IU57 520 aaPredicted RBP18.9■□□□□ 0.62
CHRNA3-206ENST00000559658 PCSK9Q8NBP7 692 aaKnown RBP18.9■□□□□ 0.62
CHRNA3-206ENST00000559658 CACTINQ8WUQ7 758 aaKnown RBP18.9■□□□□ 0.62
CHRNA3-206ENST00000559658 FBXL18Q96ME1 805 aa18.9■□□□□ 0.62
CHRNA3-206ENST00000559658 PAK6Q9NQU5 681 aaPredicted RBP18.9■□□□□ 0.62
CHRNA3-206ENST00000559658 TRMT13Q9NUP7 481 aaKnown RBP18.9■□□□□ 0.62
CHRNA3-206ENST00000559658 CGNQ9P2M7 1197 aaKnown RBP18.9■□□□□ 0.62
CHRNA3-206ENST00000559658 KCNG1Q9UIX4 513 aa18.9■□□□□ 0.62
CHRNA3-206ENST00000559658 SIK3Q9Y2K2 1263 aa18.9■□□□□ 0.62
CHRNA3-206ENST00000559658 A0A0B4J269 797 aa18.9■□□□□ 0.62
CHRNA3-206ENST00000559658 A0A1W2PQ45 241 aaPredicted RBP18.9■□□□□ 0.62
CHRNA3-206ENST00000559658 A0A1W2PQY0 241 aa18.9■□□□□ 0.62
CHRNA3-206ENST00000559658 ACKR2O00590 384 aa18.9■□□□□ 0.62
CHRNA3-206ENST00000559658 GARTP22102 1010 aa18.9■□□□□ 0.62
CHRNA3-206ENST00000559658 TNFSF9P41273 254 aa18.9■□□□□ 0.62
CHRNA3-206ENST00000559658 KCNMA1Q12791 1236 aa18.9■□□□□ 0.62
CHRNA3-206ENST00000559658 BFSP1Q12934 665 aa18.9■□□□□ 0.62
CHRNA3-206ENST00000559658 PRPF4BQ13523 1007 aaKnown RBP18.9■□□□□ 0.62
CHRNA3-206ENST00000559658 CBWD6Q4V339 395 aa18.9■□□□□ 0.62
CHRNA3-206ENST00000559658 CBWD3Q5JTY5 395 aa18.9■□□□□ 0.62
CHRNA3-206ENST00000559658 CBWD5Q5RIA9 395 aa18.9■□□□□ 0.62
CHRNA3-206ENST00000559658 CEP120Q8N960 986 aa18.9■□□□□ 0.62
CHRNA3-206ENST00000559658 CPLX3Q8WVH0 158 aa18.9■□□□□ 0.62
CHRNA3-206ENST00000559658 DEFB118Q96PH6 123 aa18.9■□□□□ 0.62
CHRNA3-206ENST00000559658 TOPORSQ9NS56 1045 aaPredicted RBP18.9■□□□□ 0.62
CHRNA3-206ENST00000559658 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP18.9■□□□□ 0.62
CHRNA3-206ENST00000559658 FXR1P51114 621 aaKnown RBP eCLIP18.89■□□□□ 0.61
CHRNA3-206ENST00000559658 ADKP55263 362 aaKnown RBP18.89■□□□□ 0.61
CHRNA3-206ENST00000559658 SNRPFP62306 86 aaKnown RBP18.89■□□□□ 0.61
CHRNA3-206ENST00000559658 RBL2Q08999 1139 aa18.89■□□□□ 0.61
CHRNA3-206ENST00000559658 ITGA7Q13683 1181 aa18.89■□□□□ 0.61
CHRNA3-206ENST00000559658 ATF7IP2Q5U623 682 aa18.89■□□□□ 0.61
CHRNA3-206ENST00000559658 ZPBP2Q6X784 338 aa18.89■□□□□ 0.61
CHRNA3-206ENST00000559658 GPD1LQ8N335 351 aa18.89■□□□□ 0.61
CHRNA3-206ENST00000559658 VTI1AQ96AJ9 217 aa18.89■□□□□ 0.61
CHRNA3-206ENST00000559658 POP1Q99575 1024 aaKnown RBP18.89■□□□□ 0.61
CHRNA3-206ENST00000559658 MSTO1Q9BUK6 570 aa18.89■□□□□ 0.61
CHRNA3-206ENST00000559658 OSBPL7Q9BZF2 842 aa18.89■□□□□ 0.61
CHRNA3-206ENST00000559658 PTPRHQ9HD43 1115 aa18.89■□□□□ 0.61
CHRNA3-206ENST00000559658 AGO2Q9UKV8 859 aaKnown RBP18.89■□□□□ 0.61
CHRNA3-206ENST00000559658 ANK1P16157 1881 aa18.88■□□□□ 0.61
CHRNA3-206ENST00000559658 ITIH6Q6UXX5 1313 aa18.88■□□□□ 0.61
CHRNA3-206ENST00000559658 CNTNAP2Q9UHC6 1331 aa18.88■□□□□ 0.61
CHRNA3-206ENST00000559658 TSPAN1O60635 241 aa18.88■□□□□ 0.61
CHRNA3-206ENST00000559658 LRRN2O75325 713 aa18.88■□□□□ 0.61
CHRNA3-206ENST00000559658 TPM2P07951 284 aa18.88■□□□□ 0.61
CHRNA3-206ENST00000559658 CTSHP09668 335 aa18.88■□□□□ 0.61
CHRNA3-206ENST00000559658 CCL5P13501 91 aa18.88■□□□□ 0.61
CHRNA3-206ENST00000559658 ARF4P18085 180 aaPredicted RBP18.88■□□□□ 0.61
CHRNA3-206ENST00000559658 PROZP22891 400 aa18.88■□□□□ 0.61
CHRNA3-206ENST00000559658 MATR3P43243 847 aaKnown RBP eCLIP18.88■□□□□ 0.61
CHRNA3-206ENST00000559658 LBX1P52954 281 aa18.88■□□□□ 0.61
CHRNA3-206ENST00000559658 POU5F1BQ06416 359 aa18.88■□□□□ 0.61
CHRNA3-206ENST00000559658 CCDC127Q96BQ5 260 aa18.88■□□□□ 0.61
CHRNA3-206ENST00000559658 ERGIC2Q96RQ1 377 aa18.88■□□□□ 0.61
CHRNA3-206ENST00000559658 METTL14Q9HCE5 456 aaKnown RBP18.88■□□□□ 0.61
CHRNA3-206ENST00000559658 EIF2AK3Q9NZJ5 1116 aaKnown RBP18.88■□□□□ 0.61
CHRNA3-206ENST00000559658 PTPRJQ12913 1337 aa18.88■□□□□ 0.61
CHRNA3-206ENST00000559658 A0A1W2PQC6 194 aa18.88■□□□□ 0.61
CHRNA3-206ENST00000559658 TOM1L1O75674 476 aa18.88■□□□□ 0.61
CHRNA3-206ENST00000559658 AFPP02771 609 aaKnown RBP18.88■□□□□ 0.61
CHRNA3-206ENST00000559658 CASP14P31944 242 aa18.88■□□□□ 0.61
CHRNA3-206ENST00000559658 ABCD1P33897 745 aa18.88■□□□□ 0.61
CHRNA3-206ENST00000559658 PPP3CAQ08209 521 aa18.88■□□□□ 0.61
CHRNA3-206ENST00000559658 FKBP15Q5T1M5 1219 aa18.88■□□□□ 0.61
CHRNA3-206ENST00000559658 TSHZ1Q6ZSZ6 1077 aa18.88■□□□□ 0.61
CHRNA3-206ENST00000559658 SERINC5Q86VE9 423 aa18.88■□□□□ 0.61
CHRNA3-206ENST00000559658 ZNF410Q86VK4 478 aa18.88■□□□□ 0.61
CHRNA3-206ENST00000559658 TMEM192Q8IY95 271 aa18.88■□□□□ 0.61
CHRNA3-206ENST00000559658 DHX38Q92620 1227 aaKnown RBP18.88■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms