RNA–Protein interactions for RNA: ENST00000559494.1

TSPAN3-207, Transcript of tetraspanin 3, humanhuman

TSL 5 BASIC

Gene TSPAN3, Length 1,326 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-207ENST00000559494 MEIS3P2A8K0S8 358 aa22.31■■□□□ 1.16
TSPAN3-207ENST00000559494 GADD45BO75293 160 aaPredicted RBP22.31■■□□□ 1.16
TSPAN3-207ENST00000559494 ZNF202O95125 648 aa22.31■■□□□ 1.16
TSPAN3-207ENST00000559494 HERC4Q5GLZ8 1057 aaPredicted RBP22.31■■□□□ 1.16
TSPAN3-207ENST00000559494 SLC27A1Q6PCB7 646 aa22.31■■□□□ 1.16
TSPAN3-207ENST00000559494 Q7L0L9 218 aa22.31■■□□□ 1.16
TSPAN3-207ENST00000559494 ZNF720Q7Z2F6 126 aa22.31■■□□□ 1.16
TSPAN3-207ENST00000559494 SPRED2Q7Z698 418 aa22.31■■□□□ 1.16
TSPAN3-207ENST00000559494 ACO2Q99798 780 aaKnown RBP22.31■■□□□ 1.16
TSPAN3-207ENST00000559494 TARS2Q9BW92 718 aaKnown RBP22.31■■□□□ 1.16
TSPAN3-207ENST00000559494 TBC1D7Q9P0N9 293 aa22.31■■□□□ 1.16
TSPAN3-207ENST00000559494 SEL1LQ9UBV2 794 aa22.31■■□□□ 1.16
TSPAN3-207ENST00000559494 FNDC1Q4ZHG4 1894 aaPredicted RBP22.3■■□□□ 1.16
TSPAN3-207ENST00000559494 H0YCG3 227 aa22.3■■□□□ 1.16
TSPAN3-207ENST00000559494 K7ENM7 598 aa22.3■■□□□ 1.16
TSPAN3-207ENST00000559494 N4BP3O15049 544 aa22.3■■□□□ 1.16
TSPAN3-207ENST00000559494 NPTXRO95502 500 aa22.3■■□□□ 1.16
TSPAN3-207ENST00000559494 GTF2BQ00403 316 aa22.3■■□□□ 1.16
TSPAN3-207ENST00000559494 CUL4BQ13620 913 aa22.3■■□□□ 1.16
TSPAN3-207ENST00000559494 CSPP1Q1MSJ5 1256 aa22.3■■□□□ 1.16
TSPAN3-207ENST00000559494 TMEM132AQ24JP5 1023 aa22.3■■□□□ 1.16
TSPAN3-207ENST00000559494 PAN2Q504Q3 1202 aaKnown RBP22.3■■□□□ 1.16
TSPAN3-207ENST00000559494 CLLU1OSQ5K130 101 aa22.3■■□□□ 1.16
TSPAN3-207ENST00000559494 ATF7IP2Q5U623 682 aa22.3■■□□□ 1.16
TSPAN3-207ENST00000559494 PPP2R2DQ66LE6 453 aa22.3■■□□□ 1.16
TSPAN3-207ENST00000559494 AGMOQ6ZNB7 445 aa22.3■■□□□ 1.16
TSPAN3-207ENST00000559494 CCDC65Q8IXS2 484 aa22.3■■□□□ 1.16
TSPAN3-207ENST00000559494 FMR1NBQ8N0W7 255 aaPredicted RBP22.3■■□□□ 1.16
TSPAN3-207ENST00000559494 TMEM87AQ8NBN3 555 aa22.3■■□□□ 1.16
TSPAN3-207ENST00000559494 ENGASEQ8NFI3 743 aa22.3■■□□□ 1.16
TSPAN3-207ENST00000559494 CASD1Q96PB1 797 aa22.3■■□□□ 1.16
TSPAN3-207ENST00000559494 MRPL4Q9BYD3 311 aaKnown RBP22.3■■□□□ 1.16
TSPAN3-207ENST00000559494 RNF39Q9H2S5 420 aa22.3■■□□□ 1.16
TSPAN3-207ENST00000559494 PTPRHQ9HD43 1115 aa22.3■■□□□ 1.16
TSPAN3-207ENST00000559494 HES2Q9Y543 173 aa22.3■■□□□ 1.16
TSPAN3-207ENST00000559494 IPPQ9Y573 584 aa22.3■■□□□ 1.16
TSPAN3-207ENST00000559494 TMEM265A0A087WTH1 108 aa22.29■■□□□ 1.16
TSPAN3-207ENST00000559494 TBKBP1A7MCY6 615 aa22.29■■□□□ 1.16
TSPAN3-207ENST00000559494 ASIC1P78348 528 aa22.29■■□□□ 1.16
TSPAN3-207ENST00000559494 STRN3Q13033 797 aa22.29■■□□□ 1.16
TSPAN3-207ENST00000559494 COASYQ13057 564 aa22.29■■□□□ 1.16
TSPAN3-207ENST00000559494 SNW1Q13573 536 aaKnown RBP22.29■■□□□ 1.16
TSPAN3-207ENST00000559494 BTG3Q14201 252 aaPredicted RBP22.29■■□□□ 1.16
TSPAN3-207ENST00000559494 ZC2HC1CQ53FD0 456 aaPredicted RBP22.29■■□□□ 1.16
TSPAN3-207ENST00000559494 ZNF697Q5TEC3 545 aa22.29■■□□□ 1.16
TSPAN3-207ENST00000559494 KRBA2Q6ZNG9 492 aa22.29■■□□□ 1.16
TSPAN3-207ENST00000559494 CMTR2Q8IYT2 770 aaKnown RBP22.29■■□□□ 1.16
TSPAN3-207ENST00000559494 PGBD4Q96DM1 585 aa22.29■■□□□ 1.16
TSPAN3-207ENST00000559494 STRA6Q9BX79 667 aa22.29■■□□□ 1.16
TSPAN3-207ENST00000559494 ST6GALNAC4Q9H4F1 302 aa22.29■■□□□ 1.16
TSPAN3-207ENST00000559494 TBX20Q9UMR3 447 aa22.29■■□□□ 1.16
TSPAN3-207ENST00000559494 TNFSF13BQ9Y275 285 aa22.29■■□□□ 1.16
TSPAN3-207ENST00000559494 SCP2P22307 547 aa22.28■■□□□ 1.16
TSPAN3-207ENST00000559494 CLEC17AQ6ZS10 378 aa22.28■■□□□ 1.16
TSPAN3-207ENST00000559494 FIBCD1Q8N539 461 aa22.28■■□□□ 1.16
TSPAN3-207ENST00000559494 CNNM3Q8NE01 707 aa22.28■■□□□ 1.16
TSPAN3-207ENST00000559494 HELQQ8TDG4 1101 aa22.28■■□□□ 1.16
TSPAN3-207ENST00000559494 HPS3Q969F9 1004 aa22.28■■□□□ 1.16
TSPAN3-207ENST00000559494 ZBTB45Q96K62 511 aaPredicted RBP22.28■■□□□ 1.16
TSPAN3-207ENST00000559494 FAM161BQ96MY7 647 aa22.28■■□□□ 1.16
TSPAN3-207ENST00000559494 FGFBP2Q9BYJ0 223 aa22.28■■□□□ 1.16
TSPAN3-207ENST00000559494 TRIM6Q9C030 488 aaPredicted RBP22.28■■□□□ 1.16
TSPAN3-207ENST00000559494 TMEM117Q9H0C3 514 aa22.28■■□□□ 1.16
TSPAN3-207ENST00000559494 NXF3Q9H4D5 531 aaKnown RBP22.28■■□□□ 1.16
TSPAN3-207ENST00000559494 MRPL44Q9H9J2 332 aaKnown RBP22.28■■□□□ 1.16
TSPAN3-207ENST00000559494 CERS4Q9HA82 394 aa22.28■■□□□ 1.16
TSPAN3-207ENST00000559494 OLFML3Q9NRN5 406 aa22.28■■□□□ 1.16
TSPAN3-207ENST00000559494 ABLIM1O14639 778 aa22.27■■□□□ 1.16
TSPAN3-207ENST00000559494 HOXA2O43364 376 aa22.27■■□□□ 1.16
TSPAN3-207ENST00000559494 OFD1O75665 1012 aa22.27■■□□□ 1.16
TSPAN3-207ENST00000559494 PPP1R37O75864 691 aa22.27■■□□□ 1.16
TSPAN3-207ENST00000559494 LINC00271P0C7V0 271 aa22.27■■□□□ 1.16
TSPAN3-207ENST00000559494 ITGA4P13612 1032 aa22.27■■□□□ 1.16
TSPAN3-207ENST00000559494 UNC13DQ70J99 1090 aa22.27■■□□□ 1.16
TSPAN3-207ENST00000559494 DEFB123Q8N688 67 aa22.27■■□□□ 1.16
TSPAN3-207ENST00000559494 SLC17A8Q8NDX2 589 aa22.27■■□□□ 1.16
TSPAN3-207ENST00000559494 PVALEFA0A1B0GWK0 134 aa22.26■■□□□ 1.15
TSPAN3-207ENST00000559494 GTPBP6O43824 516 aaPredicted RBP22.26■■□□□ 1.15
TSPAN3-207ENST00000559494 KLRC4O43908 158 aa22.26■■□□□ 1.15
TSPAN3-207ENST00000559494 MYBP10242 640 aa22.26■■□□□ 1.15
TSPAN3-207ENST00000559494 PROZP22891 400 aa22.26■■□□□ 1.15
TSPAN3-207ENST00000559494 CASP5P51878 434 aa22.26■■□□□ 1.15
TSPAN3-207ENST00000559494 ERVK-21P61565 698 aa22.26■■□□□ 1.15
TSPAN3-207ENST00000559494 GRIN2CQ14957 1233 aa22.26■■□□□ 1.15
TSPAN3-207ENST00000559494 ZPBP2Q6X784 338 aa22.26■■□□□ 1.15
TSPAN3-207ENST00000559494 LRRC55Q6ZSA7 311 aa22.26■■□□□ 1.15
TSPAN3-207ENST00000559494 TGS1Q96RS0 853 aaKnown RBP22.26■■□□□ 1.15
TSPAN3-207ENST00000559494 ADPGKQ9BRR6 497 aa22.26■■□□□ 1.15
TSPAN3-207ENST00000559494 C17orf80Q9BSJ5 609 aa22.26■■□□□ 1.15
TSPAN3-207ENST00000559494 APOL6Q9BWW8 343 aa22.26■■□□□ 1.15
TSPAN3-207ENST00000559494 TYW1Q9NV66 732 aaKnown RBP22.26■■□□□ 1.15
TSPAN3-207ENST00000559494 MRPL42Q9Y6G3 142 aaKnown RBP22.26■■□□□ 1.15
TSPAN3-207ENST00000559494 PIGRP01833 764 aa22.25■■□□□ 1.15
TSPAN3-207ENST00000559494 PRR29P0C7W0 189 aa22.25■■□□□ 1.15
TSPAN3-207ENST00000559494 AKAP5P24588 427 aa22.25■■□□□ 1.15
TSPAN3-207ENST00000559494 AFF1P51825 1210 aaKnown RBP22.25■■□□□ 1.15
TSPAN3-207ENST00000559494 FAM160A1Q05DH4 1040 aa22.25■■□□□ 1.15
TSPAN3-207ENST00000559494 EHHADHQ08426 723 aa22.25■■□□□ 1.15
TSPAN3-207ENST00000559494 KCNA1Q09470 495 aa22.25■■□□□ 1.15
TSPAN3-207ENST00000559494 ZBTB33Q86T24 672 aa22.25■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms