RNA–Protein interactions for RNA: ENST00000559108.1

TPM1-217, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 437 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-217ENST00000559108 NXF3Q9H4D5 531 aaKnown RBP11.99□□□□□ -0.49
TPM1-217ENST00000559108 ST6GALNAC4Q9H4F1 302 aa11.99□□□□□ -0.49
TPM1-217ENST00000559108 PRMT7Q9NVM4 692 aaPredicted RBP11.99□□□□□ -0.49
TPM1-217ENST00000559108 LARSQ9P2J5 1176 aaKnown RBP11.99□□□□□ -0.49
TPM1-217ENST00000559108 TBX20Q9UMR3 447 aa11.99□□□□□ -0.49
TPM1-217ENST00000559108 GDAQ9Y2T3 454 aa11.99□□□□□ -0.49
TPM1-217ENST00000559108 CHD9Q3L8U1 2897 aa11.99□□□□□ -0.49
TPM1-217ENST00000559108 K7ERI5 159 aa11.98□□□□□ -0.49
TPM1-217ENST00000559108 FAM189A1O60320 539 aa11.98□□□□□ -0.49
TPM1-217ENST00000559108 ERLIN2O94905 339 aa11.98□□□□□ -0.49
TPM1-217ENST00000559108 NPTXRO95502 500 aa11.98□□□□□ -0.49
TPM1-217ENST00000559108 LINC00271P0C7V0 271 aa11.98□□□□□ -0.49
TPM1-217ENST00000559108 ACTN1P12814 892 aa11.98□□□□□ -0.49
TPM1-217ENST00000559108 SARSP49591 514 aaKnown RBP11.98□□□□□ -0.49
TPM1-217ENST00000559108 EFNA5P52803 228 aa11.98□□□□□ -0.49
TPM1-217ENST00000559108 PRPF4BQ13523 1007 aaKnown RBP11.98□□□□□ -0.49
TPM1-217ENST00000559108 CAMK4Q16566 473 aa11.98□□□□□ -0.49
TPM1-217ENST00000559108 MAPK6Q16659 721 aa11.98□□□□□ -0.49
TPM1-217ENST00000559108 CLLU1OSQ5K130 101 aa11.98□□□□□ -0.49
TPM1-217ENST00000559108 FAM26FQ5R3K3 315 aa11.98□□□□□ -0.49
TPM1-217ENST00000559108 ATF7IP2Q5U623 682 aa11.98□□□□□ -0.49
TPM1-217ENST00000559108 ECHDC2Q86YB7 292 aa11.98□□□□□ -0.49
TPM1-217ENST00000559108 MAP4K3Q8IVH8 894 aa11.98□□□□□ -0.49
TPM1-217ENST00000559108 CCDC65Q8IXS2 484 aa11.98□□□□□ -0.49
TPM1-217ENST00000559108 MYOCDQ8IZQ8 938 aa11.98□□□□□ -0.49
TPM1-217ENST00000559108 SCFD1Q8WVM8 642 aa11.98□□□□□ -0.49
TPM1-217ENST00000559108 TOP1MTQ969P6 601 aa11.98□□□□□ -0.49
TPM1-217ENST00000559108 TRAIPQ9BWF2 469 aa11.98□□□□□ -0.49
TPM1-217ENST00000559108 FTHL17Q9BXU8 183 aa11.98□□□□□ -0.49
TPM1-217ENST00000559108 CDT1Q9H211 546 aa11.98□□□□□ -0.49
TPM1-217ENST00000559108 MRPL44Q9H9J2 332 aaKnown RBP11.98□□□□□ -0.49
TPM1-217ENST00000559108 SLC39A2Q9NP94 309 aa11.98□□□□□ -0.49
TPM1-217ENST00000559108 FAM105AQ9NUU6 356 aa11.98□□□□□ -0.49
TPM1-217ENST00000559108 PCDHB2Q9Y5E7 798 aa11.98□□□□□ -0.49
TPM1-217ENST00000559108 PCDHA5Q9Y5H7 936 aa11.98□□□□□ -0.49
TPM1-217ENST00000559108 SLC4A7Q9Y6M7 1214 aa11.98□□□□□ -0.49
TPM1-217ENST00000559108 PLXNA4Q9HCM2 1894 aa11.97□□□□□ -0.49
TPM1-217ENST00000559108 A0A0U1RQF3 1178 aa11.97□□□□□ -0.49
TPM1-217ENST00000559108 PVALEFA0A1B0GWK0 134 aa11.97□□□□□ -0.49
TPM1-217ENST00000559108 TGFB1I1O43294 461 aa11.97□□□□□ -0.49
TPM1-217ENST00000559108 UPP2O95045 317 aa11.97□□□□□ -0.49
TPM1-217ENST00000559108 GJB5O95377 273 aa11.97□□□□□ -0.49
TPM1-217ENST00000559108 GCNT3O95395 438 aa11.97□□□□□ -0.49
TPM1-217ENST00000559108 PIGRP01833 764 aa11.97□□□□□ -0.49
TPM1-217ENST00000559108 ATP2A2P16615 1042 aaKnown RBP11.97□□□□□ -0.49
TPM1-217ENST00000559108 ADSSP30520 456 aa11.97□□□□□ -0.49
TPM1-217ENST00000559108 HTRA4P83105 476 aaPredicted RBP11.97□□□□□ -0.49
TPM1-217ENST00000559108 AMPD3Q01432 767 aa11.97□□□□□ -0.49
TPM1-217ENST00000559108 SEZ6Q53EL9 994 aa11.97□□□□□ -0.49
TPM1-217ENST00000559108 TWF2Q6IBS0 349 aaKnown RBP11.97□□□□□ -0.49
TPM1-217ENST00000559108 AGMOQ6ZNB7 445 aa11.97□□□□□ -0.49
TPM1-217ENST00000559108 SLC24A5Q71RS6 500 aa11.97□□□□□ -0.49
TPM1-217ENST00000559108 LRCH3Q96II8 777 aa11.97□□□□□ -0.49
TPM1-217ENST00000559108 PRIMPOLQ96LW4 560 aa11.97□□□□□ -0.49
TPM1-217ENST00000559108 PBX4Q9BYU1 374 aa11.97□□□□□ -0.49
TPM1-217ENST00000559108 CHST12Q9NRB3 414 aa11.97□□□□□ -0.49
TPM1-217ENST00000559108 SEL1LQ9UBV2 794 aa11.97□□□□□ -0.49
TPM1-217ENST00000559108 MAN1B1Q9UKM7 699 aa11.97□□□□□ -0.49
TPM1-217ENST00000559108 TNFSF13BQ9Y275 285 aa11.97□□□□□ -0.49
TPM1-217ENST00000559108 IPPQ9Y573 584 aa11.97□□□□□ -0.49
TPM1-217ENST00000559108 KINO60870 393 aaKnown RBP11.96□□□□□ -0.49
TPM1-217ENST00000559108 DGKIO75912 1065 aa11.96□□□□□ -0.49
TPM1-217ENST00000559108 RHOBTB3O94955 611 aa11.96□□□□□ -0.49
TPM1-217ENST00000559108 AMHP03971 560 aa11.96□□□□□ -0.49
TPM1-217ENST00000559108 CD44P16070 742 aaKnown RBP11.96□□□□□ -0.49
TPM1-217ENST00000559108 SMTNP53814 917 aa11.96□□□□□ -0.49
TPM1-217ENST00000559108 WNT7BP56706 349 aa11.96□□□□□ -0.49
TPM1-217ENST00000559108 BMT2Q1RMZ1 405 aa11.96□□□□□ -0.49
TPM1-217ENST00000559108 L1TD1Q5T7N2 865 aaKnown RBP11.96□□□□□ -0.49
TPM1-217ENST00000559108 ISM2Q6H9L7 571 aa11.96□□□□□ -0.49
TPM1-217ENST00000559108 NOTUMQ6P988 496 aa11.96□□□□□ -0.49
TPM1-217ENST00000559108 LRRC55Q6ZSA7 311 aa11.96□□□□□ -0.49
TPM1-217ENST00000559108 MRPL10Q7Z7H8 261 aaKnown RBP11.96□□□□□ -0.49
TPM1-217ENST00000559108 ZBTB33Q86T24 672 aa11.96□□□□□ -0.49
TPM1-217ENST00000559108 RNF169Q8NCN4 708 aa11.96□□□□□ -0.49
TPM1-217ENST00000559108 GSTCDQ8NEC7 633 aa11.96□□□□□ -0.49
TPM1-217ENST00000559108 ZNF689Q96CS4 500 aaPredicted RBP11.96□□□□□ -0.49
TPM1-217ENST00000559108 SLC9A7Q96T83 725 aa11.96□□□□□ -0.49
TPM1-217ENST00000559108 MRPL4Q9BYD3 311 aaKnown RBP11.96□□□□□ -0.49
TPM1-217ENST00000559108 LRRC27Q9C0I9 530 aa11.96□□□□□ -0.49
TPM1-217ENST00000559108 CLSTN2Q9H4D0 955 aa11.96□□□□□ -0.49
TPM1-217ENST00000559108 C1orf112Q9NSG2 853 aa11.96□□□□□ -0.49
TPM1-217ENST00000559108 ANKFY1Q9P2R3 1169 aa11.96□□□□□ -0.49
TPM1-217ENST00000559108 MAPK8IP1Q9UQF2 711 aa11.96□□□□□ -0.49
TPM1-217ENST00000559108 ZNF623O75123 536 aa11.95□□□□□ -0.5
TPM1-217ENST00000559108 MYL1P05976 194 aa11.95□□□□□ -0.5
TPM1-217ENST00000559108 HARSP12081 509 aaKnown RBP11.95□□□□□ -0.5
TPM1-217ENST00000559108 AKAP5P24588 427 aa11.95□□□□□ -0.5
TPM1-217ENST00000559108 AXLP30530 894 aa11.95□□□□□ -0.5
TPM1-217ENST00000559108 TNFSF9P41273 254 aa11.95□□□□□ -0.5
TPM1-217ENST00000559108 KCNJ6P48051 423 aa11.95□□□□□ -0.5
TPM1-217ENST00000559108 KCNB1Q14721 858 aa11.95□□□□□ -0.5
TPM1-217ENST00000559108 PCBP1Q15365 356 aaKnown RBP eCLIP11.95□□□□□ -0.5
TPM1-217ENST00000559108 LRIT3Q3SXY7 679 aa11.95□□□□□ -0.5
TPM1-217ENST00000559108 ZNF568Q3ZCX4 644 aa11.95□□□□□ -0.5
TPM1-217ENST00000559108 SLC27A1Q6PCB7 646 aa11.95□□□□□ -0.5
TPM1-217ENST00000559108 ZPBP2Q6X784 338 aa11.95□□□□□ -0.5
TPM1-217ENST00000559108 NPAS4Q8IUM7 802 aa11.95□□□□□ -0.5
TPM1-217ENST00000559108 NELFCDQ8IXH7 590 aa11.95□□□□□ -0.5
TPM1-217ENST00000559108 ELOA2Q8IYF1 753 aaPredicted RBP11.95□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms