RNA–Protein interactions for RNA: ENST00000558910.2

TPM1-216, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 1,232 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-216ENST00000558910 PTENP60484 403 aa13.3□□□□□ -0.28
TPM1-216ENST00000558910 RNASELQ05823 741 aaKnown RBP13.3□□□□□ -0.28
TPM1-216ENST00000558910 MXD4Q14582 209 aaPredicted RBP13.3□□□□□ -0.28
TPM1-216ENST00000558910 TJAP1Q5JTD0 557 aa13.3□□□□□ -0.28
TPM1-216ENST00000558910 PLPP4Q5VZY2 271 aa13.3□□□□□ -0.28
TPM1-216ENST00000558910 KCNK18Q7Z418 384 aa13.3□□□□□ -0.28
TPM1-216ENST00000558910 HSCBQ8IWL3 235 aa13.3□□□□□ -0.28
TPM1-216ENST00000558910 RASSF8Q8NHQ8 419 aa13.3□□□□□ -0.28
TPM1-216ENST00000558910 SPPL3Q8TCT6 385 aa13.3□□□□□ -0.28
TPM1-216ENST00000558910 CDK5RAP3Q96JB5 506 aa13.3□□□□□ -0.28
TPM1-216ENST00000558910 ASB2Q96Q27 587 aa13.3□□□□□ -0.28
TPM1-216ENST00000558910 TRIM6Q9C030 488 aaPredicted RBP13.3□□□□□ -0.28
TPM1-216ENST00000558910 NSUN3Q9H649 340 aaKnown RBP13.3□□□□□ -0.28
TPM1-216ENST00000558910 CWH43Q9H720 699 aa13.3□□□□□ -0.28
TPM1-216ENST00000558910 ELAC1Q9H777 363 aaKnown RBP13.3□□□□□ -0.28
TPM1-216ENST00000558910 CHST12Q9NRB3 414 aa13.3□□□□□ -0.28
TPM1-216ENST00000558910 AAASQ9NRG9 546 aa13.3□□□□□ -0.28
TPM1-216ENST00000558910 DBR1Q9UK59 544 aaKnown RBP13.3□□□□□ -0.28
TPM1-216ENST00000558910 COL4A6Q14031 1691 aa13.3□□□□□ -0.28
TPM1-216ENST00000558910 CCDC169A6NNP5 214 aa13.29□□□□□ -0.28
TPM1-216ENST00000558910 SFI1A8K8P3 1242 aa13.29□□□□□ -0.28
TPM1-216ENST00000558910 PER2O15055 1255 aa13.29□□□□□ -0.28
TPM1-216ENST00000558910 HOXA2O43364 376 aa13.29□□□□□ -0.28
TPM1-216ENST00000558910 TSPAN1O60635 241 aa13.29□□□□□ -0.28
TPM1-216ENST00000558910 FGF18O76093 207 aa13.29□□□□□ -0.28
TPM1-216ENST00000558910 POMCP01189 267 aa13.29□□□□□ -0.28
TPM1-216ENST00000558910 SYT1P21579 422 aa13.29□□□□□ -0.28
TPM1-216ENST00000558910 MARCKSP29966 332 aaPredicted RBP13.29□□□□□ -0.28
TPM1-216ENST00000558910 HOXA11P31270 313 aaPredicted RBP13.29□□□□□ -0.28
TPM1-216ENST00000558910 AFF1P51825 1210 aaKnown RBP13.29□□□□□ -0.28
TPM1-216ENST00000558910 ATP2C1P98194 919 aaPredicted RBP13.29□□□□□ -0.28
TPM1-216ENST00000558910 GRIN1Q05586 938 aa13.29□□□□□ -0.28
TPM1-216ENST00000558910 MBTD1Q05BQ5 628 aa13.29□□□□□ -0.28
TPM1-216ENST00000558910 NCBP1Q09161 790 aaKnown RBP13.29□□□□□ -0.28
TPM1-216ENST00000558910 SF3A1Q15459 793 aaKnown RBP13.29□□□□□ -0.28
TPM1-216ENST00000558910 TIGD5Q53EQ6 642 aa13.29□□□□□ -0.28
TPM1-216ENST00000558910 SPECC1Q5M775 1068 aa13.29□□□□□ -0.28
TPM1-216ENST00000558910 GLB1LQ6UWU2 654 aa13.29□□□□□ -0.28
TPM1-216ENST00000558910 ADGRD2Q7Z7M1 963 aa13.29□□□□□ -0.28
TPM1-216ENST00000558910 ZNF598Q86UK7 904 aaKnown RBP13.29□□□□□ -0.28
TPM1-216ENST00000558910 ZBTB8OSQ8IWT0 167 aa13.29□□□□□ -0.28
TPM1-216ENST00000558910 LRRC43Q8N309 656 aa13.29□□□□□ -0.28
TPM1-216ENST00000558910 IGSF22Q8N9C0 903 aa13.29□□□□□ -0.28
TPM1-216ENST00000558910 MCPH1Q8NEM0 835 aa13.29□□□□□ -0.28
TPM1-216ENST00000558910 DEPTORQ8TB45 409 aa13.29□□□□□ -0.28
TPM1-216ENST00000558910 MMTAG2Q9BU76 263 aaKnown RBP13.29□□□□□ -0.28
TPM1-216ENST00000558910 UBE2ZQ9H832 354 aaPredicted RBP13.29□□□□□ -0.28
TPM1-216ENST00000558910 LMCD1Q9NZU5 365 aa13.29□□□□□ -0.28
TPM1-216ENST00000558910 DNM3Q9UQ16 869 aa13.29□□□□□ -0.28
TPM1-216ENST00000558910 CLIC4Q9Y696 253 aa13.29□□□□□ -0.28
TPM1-216ENST00000558910 ARID2Q68CP9 1835 aa13.29□□□□□ -0.28
TPM1-216ENST00000558910 NPHP3-ACAD11A0A0J9YXS1 232 aa13.28□□□□□ -0.28
TPM1-216ENST00000558910 C5orf67F2Z3F1 127 aa13.28□□□□□ -0.28
TPM1-216ENST00000558910 LINC01565O15544 149 aa13.28□□□□□ -0.28
TPM1-216ENST00000558910 XRCC6P12956 609 aaKnown RBP eCLIP13.28□□□□□ -0.28
TPM1-216ENST00000558910 ITGA4P13612 1032 aa13.28□□□□□ -0.28
TPM1-216ENST00000558910 LAG3P18627 525 aa13.28□□□□□ -0.28
TPM1-216ENST00000558910 CYP11B2P19099 503 aa13.28□□□□□ -0.28
TPM1-216ENST00000558910 AKAP5P24588 427 aa13.28□□□□□ -0.28
TPM1-216ENST00000558910 NRIP1P48552 1158 aa13.28□□□□□ -0.28
TPM1-216ENST00000558910 ERVFC1P60507 584 aa13.28□□□□□ -0.28
TPM1-216ENST00000558910 KCNC4Q03721 635 aa13.28□□□□□ -0.28
TPM1-216ENST00000558910 CAMK1Q14012 370 aa13.28□□□□□ -0.28
TPM1-216ENST00000558910 PDIA5Q14554 519 aa13.28□□□□□ -0.28
TPM1-216ENST00000558910 NOMO2Q5JPE7 1267 aa13.28□□□□□ -0.28
TPM1-216ENST00000558910 UBXN11Q5T124 520 aa13.28□□□□□ -0.28
TPM1-216ENST00000558910 LLGL2Q6P1M3 1020 aa13.28□□□□□ -0.28
TPM1-216ENST00000558910 KCNT2Q6UVM3 1135 aa13.28□□□□□ -0.28
TPM1-216ENST00000558910 CABP7Q86V35 215 aa13.28□□□□□ -0.28
TPM1-216ENST00000558910 ADAMTS19Q8TE59 1207 aa13.28□□□□□ -0.28
TPM1-216ENST00000558910 ATXN2LQ8WWM7 1075 aaKnown RBP13.28□□□□□ -0.28
TPM1-216ENST00000558910 ZNF558Q96NG5 402 aa13.28□□□□□ -0.28
TPM1-216ENST00000558910 RUSC1Q9BVN2 902 aa13.28□□□□□ -0.28
TPM1-216ENST00000558910 PLVAPQ9BX97 442 aa13.28□□□□□ -0.28
TPM1-216ENST00000558910 TMEM134Q9H6X4 195 aa13.28□□□□□ -0.28
TPM1-216ENST00000558910 ENTPD7Q9NQZ7 604 aa13.28□□□□□ -0.28
TPM1-216ENST00000558910 KLK14Q9P0G3 267 aa13.28□□□□□ -0.28
TPM1-216ENST00000558910 PARP2Q9UGN5 583 aa13.28□□□□□ -0.28
TPM1-216ENST00000558910 TCF20Q9UGU0 1960 aaKnown RBP13.28□□□□□ -0.28
TPM1-216ENST00000558910 LAD1O00515 517 aa13.27□□□□□ -0.29
TPM1-216ENST00000558910 HIP1RO75146 1068 aa13.27□□□□□ -0.29
TPM1-216ENST00000558910 OFD1O75665 1012 aa13.27□□□□□ -0.29
TPM1-216ENST00000558910 EOMESO95936 686 aa13.27□□□□□ -0.29
TPM1-216ENST00000558910 PRKCBP05771 671 aa13.27□□□□□ -0.29
TPM1-216ENST00000558910 ARF4P18085 180 aaPredicted RBP13.27□□□□□ -0.29
TPM1-216ENST00000558910 PDCP20941 246 aa13.27□□□□□ -0.29
TPM1-216ENST00000558910 PRPHP41219 470 aa13.27□□□□□ -0.29
TPM1-216ENST00000558910 BCAR1P56945 870 aa13.27□□□□□ -0.29
TPM1-216ENST00000558910 RBM10P98175 930 aaKnown RBP13.27□□□□□ -0.29
TPM1-216ENST00000558910 HYAL1Q12794 435 aa13.27□□□□□ -0.29
TPM1-216ENST00000558910 NOTUMQ6P988 496 aa13.27□□□□□ -0.29
TPM1-216ENST00000558910 AGMOQ6ZNB7 445 aa13.27□□□□□ -0.29
TPM1-216ENST00000558910 TMC7Q7Z402 723 aa13.27□□□□□ -0.29
TPM1-216ENST00000558910 BRAPQ7Z569 592 aa13.27□□□□□ -0.29
TPM1-216ENST00000558910 URGCPQ8TCY9 931 aa13.27□□□□□ -0.29
TPM1-216ENST00000558910 AUTS2Q8WXX7 1259 aa13.27□□□□□ -0.29
TPM1-216ENST00000558910 RABGGTAQ92696 567 aa13.27□□□□□ -0.29
TPM1-216ENST00000558910 PGBD4Q96DM1 585 aa13.27□□□□□ -0.29
TPM1-216ENST00000558910 IFT74Q96LB3 600 aa13.27□□□□□ -0.29
TPM1-216ENST00000558910 PNMA5Q96PV4 448 aa13.27□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms