RNA–Protein interactions for RNA: ENST00000558211.2

HMGB1P8-201, Transcript of high mobility group box 1 pseudogene 8, humanhuman

BASIC

Gene HMGB1P8, Length 949 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P8-201ENST00000558211 PRKAG2Q9UGJ0 569 aa13.31□□□□□ -0.28
HMGB1P8-201ENST00000558211 ZMYND8Q9ULU4 1186 aaPredicted RBP13.31□□□□□ -0.28
HMGB1P8-201ENST00000558211 UMODL1Q5DID0 1318 aa13.31□□□□□ -0.28
HMGB1P8-201ENST00000558211 MYH11P35749 1972 aa13.31□□□□□ -0.28
HMGB1P8-201ENST00000558211 IGKV6-21A0A0C4DH24 114 aa13.3□□□□□ -0.28
HMGB1P8-201ENST00000558211 FAM237AA0A1B0GTK4 181 aa13.3□□□□□ -0.28
HMGB1P8-201ENST00000558211 MYMKA6NI61 221 aa13.3□□□□□ -0.28
HMGB1P8-201ENST00000558211 SFI1A8K8P3 1242 aa13.3□□□□□ -0.28
HMGB1P8-201ENST00000558211 HIP1RO75146 1068 aa13.3□□□□□ -0.28
HMGB1P8-201ENST00000558211 CKBP12277 381 aa13.3□□□□□ -0.28
HMGB1P8-201ENST00000558211 RAG1P15918 1043 aa13.3□□□□□ -0.28
HMGB1P8-201ENST00000558211 RFX1P22670 979 aa13.3□□□□□ -0.28
HMGB1P8-201ENST00000558211 CYP2C18P33260 490 aa13.3□□□□□ -0.28
HMGB1P8-201ENST00000558211 BFSP2Q13515 415 aa13.3□□□□□ -0.28
HMGB1P8-201ENST00000558211 TRIM71Q2Q1W2 868 aaKnown RBP13.3□□□□□ -0.28
HMGB1P8-201ENST00000558211 ARSHQ5FYA8 562 aa13.3□□□□□ -0.28
HMGB1P8-201ENST00000558211 ZNF618Q5T7W0 954 aa13.3□□□□□ -0.28
HMGB1P8-201ENST00000558211 IER5Q5VY09 327 aa13.3□□□□□ -0.28
HMGB1P8-201ENST00000558211 KSR1Q8IVT5 923 aa13.3□□□□□ -0.28
HMGB1P8-201ENST00000558211 GRAMD1CQ8IYS0 662 aa13.3□□□□□ -0.28
HMGB1P8-201ENST00000558211 LINC01465Q8N7H1 131 aa13.3□□□□□ -0.28
HMGB1P8-201ENST00000558211 CNNM3Q8NE01 707 aa13.3□□□□□ -0.28
HMGB1P8-201ENST00000558211 MCPH1Q8NEM0 835 aa13.3□□□□□ -0.28
HMGB1P8-201ENST00000558211 TCP11Q8WWU5 503 aa13.3□□□□□ -0.28
HMGB1P8-201ENST00000558211 PRPF31Q8WWY3 499 aaKnown RBP13.3□□□□□ -0.28
HMGB1P8-201ENST00000558211 SCLT1Q96NL6 688 aa13.3□□□□□ -0.28
HMGB1P8-201ENST00000558211 NOC4LQ9BVI4 516 aaKnown RBP13.3□□□□□ -0.28
HMGB1P8-201ENST00000558211 ZNF395Q9H8N7 513 aaPredicted RBP13.3□□□□□ -0.28
HMGB1P8-201ENST00000558211 LMBRD1Q9NUN5 540 aa13.3□□□□□ -0.28
HMGB1P8-201ENST00000558211 TBX21Q9UL17 535 aa13.3□□□□□ -0.28
HMGB1P8-201ENST00000558211 PCDHGA11Q9Y5H2 935 aa13.3□□□□□ -0.28
HMGB1P8-201ENST00000558211 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP13.29□□□□□ -0.28
HMGB1P8-201ENST00000558211 RSPH10B2B2RC85 870 aa13.29□□□□□ -0.28
HMGB1P8-201ENST00000558211 M0QZ92 97 aa13.29□□□□□ -0.28
HMGB1P8-201ENST00000558211 SLFN14P0C7P3 912 aa13.29□□□□□ -0.28
HMGB1P8-201ENST00000558211 RSPH10BP0C881 870 aa13.29□□□□□ -0.28
HMGB1P8-201ENST00000558211 SRGAP2CP0DJJ0 459 aa13.29□□□□□ -0.28
HMGB1P8-201ENST00000558211 CASP1P29466 404 aa13.29□□□□□ -0.28
HMGB1P8-201ENST00000558211 NLRP11P59045 1033 aaKnown RBP13.29□□□□□ -0.28
HMGB1P8-201ENST00000558211 MRPS6P82932 125 aaKnown RBP13.29□□□□□ -0.28
HMGB1P8-201ENST00000558211 FAM160A1Q05DH4 1040 aa13.29□□□□□ -0.28
HMGB1P8-201ENST00000558211 KIZQ2M2Z5 673 aa13.29□□□□□ -0.28
HMGB1P8-201ENST00000558211 FMR1NBQ8N0W7 255 aaPredicted RBP13.29□□□□□ -0.28
HMGB1P8-201ENST00000558211 NME8Q8N427 588 aa13.29□□□□□ -0.28
HMGB1P8-201ENST00000558211 CAGE1Q8TC20 777 aa13.29□□□□□ -0.28
HMGB1P8-201ENST00000558211 ASAP3Q8TDY4 903 aa13.29□□□□□ -0.28
HMGB1P8-201ENST00000558211 PSPC1Q8WXF1 523 aaKnown RBP13.29□□□□□ -0.28
HMGB1P8-201ENST00000558211 SCLYQ96I15 445 aa13.29□□□□□ -0.28
HMGB1P8-201ENST00000558211 NLRP4Q96MN2 994 aa13.29□□□□□ -0.28
HMGB1P8-201ENST00000558211 BLZF1Q9H2G9 400 aa13.29□□□□□ -0.28
HMGB1P8-201ENST00000558211 CUEDC2Q9H467 287 aa13.29□□□□□ -0.28
HMGB1P8-201ENST00000558211 CDY2AQ9Y6F7 541 aa13.29□□□□□ -0.28
HMGB1P8-201ENST00000558211 A0A087WZ62 844 aa13.28□□□□□ -0.28
HMGB1P8-201ENST00000558211 KIAA0355O15063 1070 aa13.28□□□□□ -0.28
HMGB1P8-201ENST00000558211 GAS2O43903 313 aaKnown RBP13.28□□□□□ -0.28
HMGB1P8-201ENST00000558211 FAM13AO94988 1023 aa13.28□□□□□ -0.28
HMGB1P8-201ENST00000558211 IDEP14735 1019 aa13.28□□□□□ -0.28
HMGB1P8-201ENST00000558211 SELPP16109 830 aa13.28□□□□□ -0.28
HMGB1P8-201ENST00000558211 ITGB8P26012 769 aa13.28□□□□□ -0.28
HMGB1P8-201ENST00000558211 MCM4P33991 863 aa13.28□□□□□ -0.28
HMGB1P8-201ENST00000558211 ARL2P36404 184 aa13.28□□□□□ -0.28
HMGB1P8-201ENST00000558211 AMPD3Q01432 767 aa13.28□□□□□ -0.28
HMGB1P8-201ENST00000558211 LAMTOR4Q0VGL1 99 aa13.28□□□□□ -0.28
HMGB1P8-201ENST00000558211 SNW1Q13573 536 aaKnown RBP13.28□□□□□ -0.28
HMGB1P8-201ENST00000558211 GIT2Q14161 759 aa13.28□□□□□ -0.28
HMGB1P8-201ENST00000558211 KRBA2Q6ZNG9 492 aa13.28□□□□□ -0.28
HMGB1P8-201ENST00000558211 LRRC8DQ7L1W4 858 aa13.28□□□□□ -0.28
HMGB1P8-201ENST00000558211 ENGASEQ8NFI3 743 aa13.28□□□□□ -0.28
HMGB1P8-201ENST00000558211 PAGE5Q96GU1 130 aa13.28□□□□□ -0.28
HMGB1P8-201ENST00000558211 OSMRQ99650 979 aa13.28□□□□□ -0.28
HMGB1P8-201ENST00000558211 REEP2Q9BRK0 252 aa13.28□□□□□ -0.28
HMGB1P8-201ENST00000558211 FDXACB1Q9BRP7 624 aaPredicted RBP13.28□□□□□ -0.28
HMGB1P8-201ENST00000558211 CELF4Q9BZC1 486 aaKnown RBP13.28□□□□□ -0.28
HMGB1P8-201ENST00000558211 TNMDQ9H2S6 317 aa13.28□□□□□ -0.28
HMGB1P8-201ENST00000558211 KBTBD4Q9NVX7 518 aa13.28□□□□□ -0.28
HMGB1P8-201ENST00000558211 USP25Q9UHP3 1055 aa13.28□□□□□ -0.28
HMGB1P8-201ENST00000558211 COL4A3BPQ9Y5P4 624 aa13.28□□□□□ -0.28
HMGB1P8-201ENST00000558211 TRPV2Q9Y5S1 764 aa13.28□□□□□ -0.28
HMGB1P8-201ENST00000558211 NR2E3Q9Y5X4 410 aa13.28□□□□□ -0.28
HMGB1P8-201ENST00000558211 SCN5AQ14524 2016 aa13.27□□□□□ -0.28
HMGB1P8-201ENST00000558211 MKI67P46013 3256 aaKnown RBP13.27□□□□□ -0.28
HMGB1P8-201ENST00000558211 A0A1W2PRU2 124 aa13.27□□□□□ -0.29
HMGB1P8-201ENST00000558211 LRRIQ4A6NIV6 560 aa13.27□□□□□ -0.29
HMGB1P8-201ENST00000558211 CCDC169A6NNP5 214 aa13.27□□□□□ -0.29
HMGB1P8-201ENST00000558211 ASAP2O43150 1006 aa13.27□□□□□ -0.29
HMGB1P8-201ENST00000558211 KINO60870 393 aaKnown RBP13.27□□□□□ -0.29
HMGB1P8-201ENST00000558211 TBCAO75347 108 aaKnown RBP13.27□□□□□ -0.29
HMGB1P8-201ENST00000558211 TIMP1P01033 207 aa13.27□□□□□ -0.29
HMGB1P8-201ENST00000558211 CHRNA1P02708 482 aa13.27□□□□□ -0.29
HMGB1P8-201ENST00000558211 IQCF3P0C7M6 154 aa13.27□□□□□ -0.29
HMGB1P8-201ENST00000558211 GLRA2P23416 452 aa13.27□□□□□ -0.29
HMGB1P8-201ENST00000558211 GUCY2CP25092 1073 aa13.27□□□□□ -0.29
HMGB1P8-201ENST00000558211 RGS19P49795 217 aa13.27□□□□□ -0.29
HMGB1P8-201ENST00000558211 GPC3P51654 580 aa13.27□□□□□ -0.29
HMGB1P8-201ENST00000558211 PEX3P56589 373 aa13.27□□□□□ -0.29
HMGB1P8-201ENST00000558211 ASIC1P78348 528 aa13.27□□□□□ -0.29
HMGB1P8-201ENST00000558211 CUL4BQ13620 913 aa13.27□□□□□ -0.29
HMGB1P8-201ENST00000558211 DEFB128Q7Z7B8 93 aa13.27□□□□□ -0.29
HMGB1P8-201ENST00000558211 MYCT1Q8N699 235 aa13.27□□□□□ -0.29
HMGB1P8-201ENST00000558211 RNF149Q8NC42 400 aa13.27□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms