RNA–Protein interactions for RNA: ENST00000558040.5

SNX1-203, Transcript of sorting nexin 1, humanhuman

TSL 5

Gene SNX1, Length 774 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-203ENST00000558040 TISP43B9A030 160 aa18.43■□□□□ 0.54
SNX1-203ENST00000558040 TLR3O15455 904 aaKnown RBP18.43■□□□□ 0.54
SNX1-203ENST00000558040 B4GALT4O60513 344 aa18.43■□□□□ 0.54
SNX1-203ENST00000558040 PSMC2P35998 433 aaKnown RBP18.43■□□□□ 0.54
SNX1-203ENST00000558040 MTIF2P46199 727 aaKnown RBP18.43■□□□□ 0.54
SNX1-203ENST00000558040 MARSP56192 900 aaKnown RBP18.43■□□□□ 0.54
SNX1-203ENST00000558040 SNX17Q15036 470 aa18.43■□□□□ 0.54
SNX1-203ENST00000558040 FILIP1LQ4L180 1135 aa18.43■□□□□ 0.54
SNX1-203ENST00000558040 ATF7IP2Q5U623 682 aa18.43■□□□□ 0.54
SNX1-203ENST00000558040 TSHZ1Q6ZSZ6 1077 aa18.43■□□□□ 0.54
SNX1-203ENST00000558040 ACO2Q99798 780 aaKnown RBP18.43■□□□□ 0.54
SNX1-203ENST00000558040 CBWD1Q9BRT8 395 aa18.43■□□□□ 0.54
SNX1-203ENST00000558040 KIAA1586Q9HCI6 787 aa18.43■□□□□ 0.54
SNX1-203ENST00000558040 ANKFY1Q9P2R3 1169 aa18.43■□□□□ 0.54
SNX1-203ENST00000558040 TNFSF13BQ9Y275 285 aa18.43■□□□□ 0.54
SNX1-203ENST00000558040 CDY2AQ9Y6F7 541 aa18.43■□□□□ 0.54
SNX1-203ENST00000558040 HTTP42858 3142 aa18.43■□□□□ 0.54
SNX1-203ENST00000558040 MAPK13O15264 365 aa18.42■□□□□ 0.54
SNX1-203ENST00000558040 CLDN3O15551 220 aa18.42■□□□□ 0.54
SNX1-203ENST00000558040 LDHAP00338 332 aaKnown RBP18.42■□□□□ 0.54
SNX1-203ENST00000558040 ADSSP30520 456 aa18.42■□□□□ 0.54
SNX1-203ENST00000558040 KRT31Q15323 416 aa18.42■□□□□ 0.54
SNX1-203ENST00000558040 CATSPER4Q7RTX7 472 aa18.42■□□□□ 0.54
SNX1-203ENST00000558040 APBB1IPQ7Z5R6 666 aaPredicted RBP18.42■□□□□ 0.54
SNX1-203ENST00000558040 FRMD5Q7Z6J6 570 aa18.42■□□□□ 0.54
SNX1-203ENST00000558040 FAM186BQ8IYM0 893 aa18.42■□□□□ 0.54
SNX1-203ENST00000558040 WNT8BQ93098 351 aa18.42■□□□□ 0.54
SNX1-203ENST00000558040 TCHPQ9BT92 498 aa18.42■□□□□ 0.54
SNX1-203ENST00000558040 TRPV6Q9H1D0 765 aa18.42■□□□□ 0.54
SNX1-203ENST00000558040 PCIF1Q9H4Z3 704 aa18.42■□□□□ 0.54
SNX1-203ENST00000558040 CDHR5Q9HBB8 845 aa18.42■□□□□ 0.54
SNX1-203ENST00000558040 ARMCX3Q9UH62 379 aaPredicted RBP18.42■□□□□ 0.54
SNX1-203ENST00000558040 N4BP3O15049 544 aa18.41■□□□□ 0.54
SNX1-203ENST00000558040 TSPAN1O60635 241 aa18.41■□□□□ 0.54
SNX1-203ENST00000558040 CSDE1O75534 798 aaKnown RBP18.41■□□□□ 0.54
SNX1-203ENST00000558040 AKAP3O75969 853 aa18.41■□□□□ 0.54
SNX1-203ENST00000558040 EDN1P05305 212 aa18.41■□□□□ 0.54
SNX1-203ENST00000558040 CTSHP09668 335 aa18.41■□□□□ 0.54
SNX1-203ENST00000558040 IQCF3P0C7M6 154 aa18.41■□□□□ 0.54
SNX1-203ENST00000558040 AXLP30530 894 aa18.41■□□□□ 0.54
SNX1-203ENST00000558040 MNX1P50219 401 aaPredicted RBP18.41■□□□□ 0.54
SNX1-203ENST00000558040 UBASH3AP57075 661 aa18.41■□□□□ 0.54
SNX1-203ENST00000558040 MGAT3Q09327 533 aa18.41■□□□□ 0.54
SNX1-203ENST00000558040 AMHR2Q16671 573 aa18.41■□□□□ 0.54
SNX1-203ENST00000558040 C1orf53Q5VUE5 145 aa18.41■□□□□ 0.54
SNX1-203ENST00000558040 MPZL3Q6UWV2 235 aa18.41■□□□□ 0.54
SNX1-203ENST00000558040 SLC39A5Q6ZMH5 540 aa18.41■□□□□ 0.54
SNX1-203ENST00000558040 FAM126BQ8IXS8 530 aa18.41■□□□□ 0.54
SNX1-203ENST00000558040 GPD1LQ8N335 351 aa18.41■□□□□ 0.54
SNX1-203ENST00000558040 CAGE1Q8TC20 777 aa18.41■□□□□ 0.54
SNX1-203ENST00000558040 DHX38Q92620 1227 aaKnown RBP18.41■□□□□ 0.54
SNX1-203ENST00000558040 TUBGCP2Q9BSJ2 902 aa18.41■□□□□ 0.54
SNX1-203ENST00000558040 MSTO1Q9BUK6 570 aa18.41■□□□□ 0.54
SNX1-203ENST00000558040 IFNKQ9P0W0 207 aa18.41■□□□□ 0.54
SNX1-203ENST00000558040 AGO2Q9UKV8 859 aaKnown RBP18.41■□□□□ 0.54
SNX1-203ENST00000558040 A0A0B4J269 797 aa18.4■□□□□ 0.54
SNX1-203ENST00000558040 LRRC10BA6NIK2 292 aa18.4■□□□□ 0.54
SNX1-203ENST00000558040 B4GALT5O43286 388 aa18.4■□□□□ 0.54
SNX1-203ENST00000558040 EXTL3O43909 919 aa18.4■□□□□ 0.54
SNX1-203ENST00000558040 COL6A1P12109 1028 aa18.4■□□□□ 0.54
SNX1-203ENST00000558040 KRT13P13646 458 aa18.4■□□□□ 0.54
SNX1-203ENST00000558040 PRKCSHP14314 528 aaPredicted RBP18.4■□□□□ 0.54
SNX1-203ENST00000558040 CASP4P49662 377 aa18.4■□□□□ 0.54
SNX1-203ENST00000558040 COPB1P53618 953 aaKnown RBP18.4■□□□□ 0.54
SNX1-203ENST00000558040 PPP2R3AQ06190 1150 aa18.4■□□□□ 0.54
SNX1-203ENST00000558040 MCL1Q07820 350 aa18.4■□□□□ 0.54
SNX1-203ENST00000558040 RBL2Q08999 1139 aa18.4■□□□□ 0.54
SNX1-203ENST00000558040 BFSP2Q13515 415 aa18.4■□□□□ 0.54
SNX1-203ENST00000558040 NOLC1Q14978 699 aaKnown RBP eCLIP18.4■□□□□ 0.54
SNX1-203ENST00000558040 MAN2A1Q16706 1144 aa18.4■□□□□ 0.54
SNX1-203ENST00000558040 TRIM71Q2Q1W2 868 aaKnown RBP18.4■□□□□ 0.54
SNX1-203ENST00000558040 ZNF568Q3ZCX4 644 aa18.4■□□□□ 0.54
SNX1-203ENST00000558040 FAM26DQ5JW98 314 aa18.4■□□□□ 0.54
SNX1-203ENST00000558040 ADPGKQ9BRR6 497 aa18.4■□□□□ 0.54
SNX1-203ENST00000558040 C11orf49Q9H6J7 331 aa18.4■□□□□ 0.54
SNX1-203ENST00000558040 TAB2Q9NYJ8 693 aa18.4■□□□□ 0.54
SNX1-203ENST00000558040 USP20Q9Y2K6 914 aa18.4■□□□□ 0.54
SNX1-203ENST00000558040 TTLL13PA6NNM8 815 aa18.39■□□□□ 0.53
SNX1-203ENST00000558040 DCDC2CA8MYV0 355 aa18.39■□□□□ 0.53
SNX1-203ENST00000558040 AP5Z1O43299 807 aa18.39■□□□□ 0.53
SNX1-203ENST00000558040 ADCY5O95622 1261 aa18.39■□□□□ 0.53
SNX1-203ENST00000558040 CD4P01730 458 aa18.39■□□□□ 0.53
SNX1-203ENST00000558040 CHRNA1P02708 482 aa18.39■□□□□ 0.53
SNX1-203ENST00000558040 ARF4P18085 180 aaPredicted RBP18.39■□□□□ 0.53
SNX1-203ENST00000558040 PROZP22891 400 aa18.39■□□□□ 0.53
SNX1-203ENST00000558040 ZNF75DP51815 510 aa18.39■□□□□ 0.53
SNX1-203ENST00000558040 ATN1P54259 1190 aaPredicted RBP18.39■□□□□ 0.53
SNX1-203ENST00000558040 SNRNP35Q16560 246 aaKnown RBP18.39■□□□□ 0.53
SNX1-203ENST00000558040 NOTUMQ6P988 496 aa18.39■□□□□ 0.53
SNX1-203ENST00000558040 INTS8Q75QN2 995 aaKnown RBP18.39■□□□□ 0.53
SNX1-203ENST00000558040 ANKRD33Q7Z3H0 272 aa18.39■□□□□ 0.53
SNX1-203ENST00000558040 USP37Q86T82 979 aa18.39■□□□□ 0.53
SNX1-203ENST00000558040 TMEM40Q8WWA1 233 aa18.39■□□□□ 0.53
SNX1-203ENST00000558040 SAAL1Q96ER3 474 aa18.39■□□□□ 0.53
SNX1-203ENST00000558040 ZBTB45Q96K62 511 aaPredicted RBP18.39■□□□□ 0.53
SNX1-203ENST00000558040 FBXL18Q96ME1 805 aa18.39■□□□□ 0.53
SNX1-203ENST00000558040 NOC4LQ9BVI4 516 aaKnown RBP18.39■□□□□ 0.53
SNX1-203ENST00000558040 XPO4Q9C0E2 1151 aaKnown RBP18.39■□□□□ 0.53
SNX1-203ENST00000558040 PTPRHQ9HD43 1115 aa18.39■□□□□ 0.53
SNX1-203ENST00000558040 AGPAT5Q9NUQ2 364 aa18.39■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms