RNA–Protein interactions for RNA: ENST00000557866.1

SPG11-204, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 2

Gene SPG11, Length 468 nt, Biotype non stop decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-204ENST00000557866 ADGRA2Q96PE1 1338 aa8.09□□□□□ -1.11
SPG11-204ENST00000557866 LOC102724159A0A0B4J2E5 919 aa8.09□□□□□ -1.11
SPG11-204ENST00000557866 TTC26A0AVF1 554 aa8.09□□□□□ -1.11
SPG11-204ENST00000557866 PES1O00541 588 aaKnown RBP8.09□□□□□ -1.11
SPG11-204ENST00000557866 EPHB6O15197 1021 aa8.09□□□□□ -1.11
SPG11-204ENST00000557866 SLC16A4O15374 487 aa8.09□□□□□ -1.11
SPG11-204ENST00000557866 DKC1O60832 514 aaKnown RBP eCLIP8.09□□□□□ -1.11
SPG11-204ENST00000557866 GNA14O95837 355 aa8.09□□□□□ -1.11
SPG11-204ENST00000557866 NR2F2P24468 414 aa8.09□□□□□ -1.11
SPG11-204ENST00000557866 CASP4P49662 377 aa8.09□□□□□ -1.11
SPG11-204ENST00000557866 PEX3P56589 373 aa8.09□□□□□ -1.11
SPG11-204ENST00000557866 CCNA1P78396 465 aa8.09□□□□□ -1.11
SPG11-204ENST00000557866 NEDD9Q14511 834 aa8.09□□□□□ -1.11
SPG11-204ENST00000557866 PWP2Q15269 919 aaKnown RBP8.09□□□□□ -1.11
SPG11-204ENST00000557866 CCDC40Q4G0X9 1142 aa8.09□□□□□ -1.11
SPG11-204ENST00000557866 OXLD1Q5BKU9 147 aa8.09□□□□□ -1.11
SPG11-204ENST00000557866 XKR3Q5GH77 459 aa8.09□□□□□ -1.11
SPG11-204ENST00000557866 FAM102BQ5T8I3 360 aa8.09□□□□□ -1.11
SPG11-204ENST00000557866 DPY19L2P1Q6NXN4 242 aa8.09□□□□□ -1.11
SPG11-204ENST00000557866 TAPT1Q6NXT6 567 aa8.09□□□□□ -1.11
SPG11-204ENST00000557866 METTL7BQ6UX53 244 aa8.09□□□□□ -1.11
SPG11-204ENST00000557866 MAMDC4Q6UXC1 1216 aa8.09□□□□□ -1.11
SPG11-204ENST00000557866 RAD9BQ6WBX8 426 aa8.09□□□□□ -1.11
SPG11-204ENST00000557866 ARMCX2Q7L311 632 aa8.09□□□□□ -1.11
SPG11-204ENST00000557866 OTUD6AQ7L8S5 288 aa8.09□□□□□ -1.11
SPG11-204ENST00000557866 FRMD5Q7Z6J6 570 aa8.09□□□□□ -1.11
SPG11-204ENST00000557866 ABRAQ8N0Z2 381 aa8.09□□□□□ -1.11
SPG11-204ENST00000557866 DRC1Q96MC2 740 aa8.09□□□□□ -1.11
SPG11-204ENST00000557866 PARK7Q99497 189 aaKnown RBP8.09□□□□□ -1.11
SPG11-204ENST00000557866 GPR20Q99678 358 aa8.09□□□□□ -1.11
SPG11-204ENST00000557866 BAG1Q99933 345 aaPredicted RBP8.09□□□□□ -1.11
SPG11-204ENST00000557866 KIFC3Q9BVG8 833 aa8.09□□□□□ -1.11
SPG11-204ENST00000557866 KATNBL1Q9H079 304 aa8.09□□□□□ -1.11
SPG11-204ENST00000557866 ST6GALNAC4Q9H4F1 302 aa8.09□□□□□ -1.11
SPG11-204ENST00000557866 ZNF302Q9NR11 478 aa8.09□□□□□ -1.11
SPG11-204ENST00000557866 CYP26B1Q9NR63 512 aa8.09□□□□□ -1.11
SPG11-204ENST00000557866 AGPAT3Q9NRZ7 376 aa8.09□□□□□ -1.11
SPG11-204ENST00000557866 TRMT1Q9NXH9 659 aaKnown RBP8.09□□□□□ -1.11
SPG11-204ENST00000557866 CAPN11Q9UMQ6 739 aa8.09□□□□□ -1.11
SPG11-204ENST00000557866 PASKQ96RG2 1323 aa8.08□□□□□ -1.12
SPG11-204ENST00000557866 RBM47A0AV96 593 aaKnown RBP8.08□□□□□ -1.12
SPG11-204ENST00000557866 SOWAHDA6NJG2 315 aa8.08□□□□□ -1.12
SPG11-204ENST00000557866 ASB14A6NK59 587 aa8.08□□□□□ -1.12
SPG11-204ENST00000557866 TISP43B9A030 160 aa8.08□□□□□ -1.12
SPG11-204ENST00000557866 K7ENM7 598 aa8.08□□□□□ -1.12
SPG11-204ENST00000557866 SLC16A3O15427 465 aaKnown RBP8.08□□□□□ -1.12
SPG11-204ENST00000557866 ARHGAP6O43182 974 aa8.08□□□□□ -1.12
SPG11-204ENST00000557866 STX10O60499 249 aa8.08□□□□□ -1.12
SPG11-204ENST00000557866 LGR5O75473 907 aa8.08□□□□□ -1.12
SPG11-204ENST00000557866 SNAI1O95863 264 aaPredicted RBP8.08□□□□□ -1.12
SPG11-204ENST00000557866 TPM2P07951 284 aa8.08□□□□□ -1.12
SPG11-204ENST00000557866 KRT9P35527 623 aa8.08□□□□□ -1.12
SPG11-204ENST00000557866 NPTX2P47972 431 aa8.08□□□□□ -1.12
SPG11-204ENST00000557866 ZNF157P51786 506 aaPredicted RBP8.08□□□□□ -1.12
SPG11-204ENST00000557866 NCKAP1LP55160 1127 aa8.08□□□□□ -1.12
SPG11-204ENST00000557866 GTF2BQ00403 316 aa8.08□□□□□ -1.12
SPG11-204ENST00000557866 TRIM14Q14142 442 aa8.08□□□□□ -1.12
SPG11-204ENST00000557866 GAS6Q14393 721 aa8.08□□□□□ -1.12
SPG11-204ENST00000557866 GRB14Q14449 540 aa8.08□□□□□ -1.12
SPG11-204ENST00000557866 MTF1Q14872 753 aa8.08□□□□□ -1.12
SPG11-204ENST00000557866 TARBP2Q15633 366 aaKnown RBP8.08□□□□□ -1.12
SPG11-204ENST00000557866 FAM110CQ1W6H9 321 aa8.08□□□□□ -1.12
SPG11-204ENST00000557866 HSDL1Q3SXM5 330 aa8.08□□□□□ -1.12
SPG11-204ENST00000557866 MTERF2Q49AM1 385 aa8.08□□□□□ -1.12
SPG11-204ENST00000557866 GNASQ5JWF2 1037 aa8.08□□□□□ -1.12
SPG11-204ENST00000557866 TMEM214Q6NUQ4 689 aaKnown RBP8.08□□□□□ -1.12
SPG11-204ENST00000557866 KCNV1Q6PIU1 500 aa8.08□□□□□ -1.12
SPG11-204ENST00000557866 WDR59Q6PJI9 974 aa8.08□□□□□ -1.12
SPG11-204ENST00000557866 TOGARAM2Q6ZUX3 1019 aa8.08□□□□□ -1.12
SPG11-204ENST00000557866 GPR142Q7Z601 462 aa8.08□□□□□ -1.12
SPG11-204ENST00000557866 SAPCD2Q86UD0 394 aa8.08□□□□□ -1.12
SPG11-204ENST00000557866 REXO1L1PQ8IX06 675 aa8.08□□□□□ -1.12
SPG11-204ENST00000557866 TMEM161BQ8NDZ6 487 aa8.08□□□□□ -1.12
SPG11-204ENST00000557866 AFAP1L1Q8TED9 768 aa8.08□□□□□ -1.12
SPG11-204ENST00000557866 SEPT1Q8WYJ6 367 aa8.08□□□□□ -1.12
SPG11-204ENST00000557866 CCDC51Q96ER9 411 aa8.08□□□□□ -1.12
SPG11-204ENST00000557866 NIFKQ9BYG3 293 aaKnown RBP8.08□□□□□ -1.12
SPG11-204ENST00000557866 GBP3Q9H0R5 595 aa8.08□□□□□ -1.12
SPG11-204ENST00000557866 DHX33Q9H6R0 707 aaKnown RBP8.08□□□□□ -1.12
SPG11-204ENST00000557866 MLXIPQ9HAP2 919 aa8.08□□□□□ -1.12
SPG11-204ENST00000557866 ABHD10Q9NUJ1 306 aa8.08□□□□□ -1.12
SPG11-204ENST00000557866 AGPAT5Q9NUQ2 364 aa8.08□□□□□ -1.12
SPG11-204ENST00000557866 LARSQ9P2J5 1176 aaKnown RBP8.08□□□□□ -1.12
SPG11-204ENST00000557866 CPA4Q9UI42 421 aa8.08□□□□□ -1.12
SPG11-204ENST00000557866 DIS3Q9Y2L1 958 aaKnown RBP8.08□□□□□ -1.12
SPG11-204ENST00000557866 ADGRA3Q8IWK6 1321 aa8.07□□□□□ -1.12
SPG11-204ENST00000557866 MANSC4A6NHS7 340 aaPredicted RBP8.07□□□□□ -1.12
SPG11-204ENST00000557866 FAM155AB1AL88 458 aaPredicted RBP8.07□□□□□ -1.12
SPG11-204ENST00000557866 ZBTB42B2RXF5 422 aa8.07□□□□□ -1.12
SPG11-204ENST00000557866 STRNO43815 780 aa8.07□□□□□ -1.12
SPG11-204ENST00000557866 NOL4O94818 638 aa8.07□□□□□ -1.12
SPG11-204ENST00000557866 RPL13P26373 211 aaKnown RBP8.07□□□□□ -1.12
SPG11-204ENST00000557866 TCF7P36402 384 aaPredicted RBP8.07□□□□□ -1.12
SPG11-204ENST00000557866 ARL2P36404 184 aa8.07□□□□□ -1.12
SPG11-204ENST00000557866 STAT5BP51692 787 aa8.07□□□□□ -1.12
SPG11-204ENST00000557866 RTP1P59025 263 aa8.07□□□□□ -1.12
SPG11-204ENST00000557866 APBA1Q02410 837 aa8.07□□□□□ -1.12
SPG11-204ENST00000557866 ARHGAP1Q07960 439 aa8.07□□□□□ -1.12
SPG11-204ENST00000557866 ALCAMQ13740 583 aa8.07□□□□□ -1.12
SPG11-204ENST00000557866 MEA1Q16626 185 aa8.07□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms