RNA–Protein interactions for RNA: ENST00000557678.1

GPHN-216, Transcript of gephyrin, humanhuman

TSL 3

Gene GPHN, Length 592 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPHN-216ENST00000557678 DSG1Q02413 1049 aa4.11□□□□□ -1.75
GPHN-216ENST00000557678 HECTD2Q5U5R9 776 aa4.11□□□□□ -1.75
GPHN-216ENST00000557678 IQSEC1Q6DN90 963 aa4.11□□□□□ -1.75
GPHN-216ENST00000557678 TAS1R1Q7RTX1 841 aa4.11□□□□□ -1.75
GPHN-216ENST00000557678 GDF7Q7Z4P5 450 aa4.11□□□□□ -1.75
GPHN-216ENST00000557678 GLB1L2Q8IW92 636 aa4.11□□□□□ -1.75
GPHN-216ENST00000557678 DHX37Q8IY37 1157 aaKnown RBP4.11□□□□□ -1.75
GPHN-216ENST00000557678 MSL3Q8N5Y2 521 aaKnown RBP4.11□□□□□ -1.75
GPHN-216ENST00000557678 OR52N2Q8NGI0 321 aa4.11□□□□□ -1.75
GPHN-216ENST00000557678 MS4A5Q9H3V2 200 aa4.11□□□□□ -1.75
GPHN-216ENST00000557678 SPTLC3Q9NUV7 552 aa4.11□□□□□ -1.75
GPHN-216ENST00000557678 RNASET2O00584 256 aaKnown RBP4.1□□□□□ -1.75
GPHN-216ENST00000557678 TGM5O43548 720 aa4.1□□□□□ -1.75
GPHN-216ENST00000557678 NCR1O76036 304 aa4.1□□□□□ -1.75
GPHN-216ENST00000557678 LMNAP02545 664 aaKnown RBP4.1□□□□□ -1.75
GPHN-216ENST00000557678 PFKMP08237 780 aa4.1□□□□□ -1.75
GPHN-216ENST00000557678 CLEC2LP0C7M8 214 aa4.1□□□□□ -1.75
GPHN-216ENST00000557678 PROZP22891 400 aa4.1□□□□□ -1.75
GPHN-216ENST00000557678 FAM189BP81408 668 aa4.1□□□□□ -1.75
GPHN-216ENST00000557678 PCBP1Q15365 356 aaKnown RBP eCLIP4.1□□□□□ -1.75
GPHN-216ENST00000557678 STRIP1Q5VSL9 837 aa4.1□□□□□ -1.75
GPHN-216ENST00000557678 CCDC62Q6P9F0 684 aa4.1□□□□□ -1.75
GPHN-216ENST00000557678 RHOUQ7L0Q8 258 aa4.1□□□□□ -1.75
GPHN-216ENST00000557678 NIM1KQ8IY84 436 aa4.1□□□□□ -1.75
GPHN-216ENST00000557678 CMTR2Q8IYT2 770 aaKnown RBP4.1□□□□□ -1.75
GPHN-216ENST00000557678 AHI1Q8N157 1196 aa4.1□□□□□ -1.75
GPHN-216ENST00000557678 BEND2Q8NDZ0 799 aa4.1□□□□□ -1.75
GPHN-216ENST00000557678 OR2W6PQ8NHA6 318 aa4.1□□□□□ -1.75
GPHN-216ENST00000557678 PPP1R14CQ8TAE6 165 aa4.1□□□□□ -1.75
GPHN-216ENST00000557678 APPBP2Q92624 585 aa4.1□□□□□ -1.75
GPHN-216ENST00000557678 CAVIN3Q969G5 261 aa4.1□□□□□ -1.75
GPHN-216ENST00000557678 DCLRE1CQ96SD1 692 aaKnown RBP4.1□□□□□ -1.75
GPHN-216ENST00000557678 PDCD2LQ9BRP1 358 aa4.1□□□□□ -1.75
GPHN-216ENST00000557678 FDXACB1Q9BRP7 624 aaPredicted RBP4.1□□□□□ -1.75
GPHN-216ENST00000557678 LSM14BQ9BX40 385 aaKnown RBP4.1□□□□□ -1.75
GPHN-216ENST00000557678 SLC46A2Q9BY10 475 aa4.1□□□□□ -1.75
GPHN-216ENST00000557678 WDR11Q9BZH6 1224 aa4.1□□□□□ -1.75
GPHN-216ENST00000557678 ENKD1Q9H0I2 346 aa4.1□□□□□ -1.75
GPHN-216ENST00000557678 AKIP1Q9NQ31 210 aa4.1□□□□□ -1.75
GPHN-216ENST00000557678 FANCLQ9NW38 375 aa4.1□□□□□ -1.75
GPHN-216ENST00000557678 CLCA2Q9UQC9 943 aa4.1□□□□□ -1.75
GPHN-216ENST00000557678 KAT6AQ92794 2004 aa4.09□□□□□ -1.75
GPHN-216ENST00000557678 CENPVL1A0A0U1RR11 272 aa4.09□□□□□ -1.75
GPHN-216ENST00000557678 UNC119BA6NIH7 251 aa4.09□□□□□ -1.75
GPHN-216ENST00000557678 AHRRA9YTQ3 701 aa4.09□□□□□ -1.75
GPHN-216ENST00000557678 LEFTY2O00292 366 aa4.09□□□□□ -1.75
GPHN-216ENST00000557678 KDM1AO60341 852 aa4.09□□□□□ -1.75
GPHN-216ENST00000557678 CANXP27824 592 aaKnown RBP4.09□□□□□ -1.75
GPHN-216ENST00000557678 GPR15P49685 360 aa4.09□□□□□ -1.75
GPHN-216ENST00000557678 NHLH2Q02577 135 aa4.09□□□□□ -1.75
GPHN-216ENST00000557678 COL10A1Q03692 680 aa4.09□□□□□ -1.75
GPHN-216ENST00000557678 UBE3CQ15386 1083 aa4.09□□□□□ -1.75
GPHN-216ENST00000557678 METTL24Q5JXM2 366 aa4.09□□□□□ -1.75
GPHN-216ENST00000557678 EFCAB12Q6NXP0 572 aa4.09□□□□□ -1.75
GPHN-216ENST00000557678 FRMD7Q6ZUT3 714 aa4.09□□□□□ -1.75
GPHN-216ENST00000557678 C16orf86Q6ZW13 317 aa4.09□□□□□ -1.75
GPHN-216ENST00000557678 DOK3Q7L591 496 aa4.09□□□□□ -1.75
GPHN-216ENST00000557678 PPM1KQ8N3J5 372 aa4.09□□□□□ -1.75
GPHN-216ENST00000557678 ZNF610Q8N9Z0 462 aa4.09□□□□□ -1.75
GPHN-216ENST00000557678 SMC1BQ8NDV3 1235 aa4.09□□□□□ -1.75
GPHN-216ENST00000557678 OR10H5Q8NGA6 315 aa4.09□□□□□ -1.75
GPHN-216ENST00000557678 NINJ1Q92982 152 aa4.09□□□□□ -1.75
GPHN-216ENST00000557678 PHACTR3Q96KR7 559 aa4.09□□□□□ -1.75
GPHN-216ENST00000557678 DRC1Q96MC2 740 aa4.09□□□□□ -1.75
GPHN-216ENST00000557678 ORAI3Q9BRQ5 295 aa4.09□□□□□ -1.75
GPHN-216ENST00000557678 MTFR1LQ9H019 292 aa4.09□□□□□ -1.75
GPHN-216ENST00000557678 PTGFRNQ9P2B2 879 aa4.09□□□□□ -1.75
GPHN-216ENST00000557678 NOC2LQ9Y3T9 749 aaKnown RBP4.09□□□□□ -1.75
GPHN-216ENST00000557678 PPP2R3BQ9Y5P8 575 aa4.09□□□□□ -1.75
GPHN-216ENST00000557678 GRID2IPA4D2P6 1211 aa4.08□□□□□ -1.76
GPHN-216ENST00000557678 ZAR1LA6NP61 321 aa4.08□□□□□ -1.76
GPHN-216ENST00000557678 SEC24DO94855 1032 aaPredicted RBP4.08□□□□□ -1.76
GPHN-216ENST00000557678 FKBP9O95302 570 aa4.08□□□□□ -1.76
GPHN-216ENST00000557678 LTA4HP09960 611 aaKnown RBP4.08□□□□□ -1.76
GPHN-216ENST00000557678 SPATA31D3P0C874 917 aa4.08□□□□□ -1.76
GPHN-216ENST00000557678 ZEB1P37275 1124 aaPredicted RBP4.08□□□□□ -1.76
GPHN-216ENST00000557678 MRPS21P82921 87 aaKnown RBP4.08□□□□□ -1.76
GPHN-216ENST00000557678 MXRA7P84157 204 aa4.08□□□□□ -1.76
GPHN-216ENST00000557678 COL4A3Q01955 1670 aa4.08□□□□□ -1.76
GPHN-216ENST00000557678 ZMYM3Q14202 1370 aa4.08□□□□□ -1.76
GPHN-216ENST00000557678 TERF2Q15554 542 aa4.08□□□□□ -1.76
GPHN-216ENST00000557678 DDB1Q16531 1140 aa4.08□□□□□ -1.76
GPHN-216ENST00000557678 TKFCQ3LXA3 575 aa4.08□□□□□ -1.76
GPHN-216ENST00000557678 CCDC178Q5BJE1 867 aa4.08□□□□□ -1.76
GPHN-216ENST00000557678 GPR158Q5T848 1215 aa4.08□□□□□ -1.76
GPHN-216ENST00000557678 BROXQ5VW32 411 aa4.08□□□□□ -1.76
GPHN-216ENST00000557678 SPATA31D4Q6ZUB0 917 aa4.08□□□□□ -1.76
GPHN-216ENST00000557678 FKBP9P1Q75LS8 142 aa4.08□□□□□ -1.76
GPHN-216ENST00000557678 LILRA3Q8N6C8 439 aaPredicted RBP4.08□□□□□ -1.76
GPHN-216ENST00000557678 RNF169Q8NCN4 708 aa4.08□□□□□ -1.76
GPHN-216ENST00000557678 OR14C36Q8NHC7 312 aa4.08□□□□□ -1.76
GPHN-216ENST00000557678 MDM1Q8TC05 714 aa4.08□□□□□ -1.76
GPHN-216ENST00000557678 UBXN4Q92575 508 aa4.08□□□□□ -1.76
GPHN-216ENST00000557678 TFAP2CQ92754 450 aa4.08□□□□□ -1.76
GPHN-216ENST00000557678 MYEOVQ96EZ4 313 aa4.08□□□□□ -1.76
GPHN-216ENST00000557678 RNPC3Q96LT9 517 aaKnown RBP4.08□□□□□ -1.76
GPHN-216ENST00000557678 TARS2Q9BW92 718 aaKnown RBP4.08□□□□□ -1.76
GPHN-216ENST00000557678 SERHL2Q9H4I8 314 aa4.08□□□□□ -1.76
GPHN-216ENST00000557678 EVLQ9UI08 416 aaPredicted RBP4.08□□□□□ -1.76
GPHN-216ENST00000557678 PRSS50Q9UI38 385 aa4.08□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms