RNA–Protein interactions for RNA: ENST00000557658.5

VIPAS39-211, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VIPAS39, Length 2,562 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-211ENST00000557658 ACCSLQ4AC99 568 aa12.7□□□□□ -0.38
VIPAS39-211ENST00000557658 RPUSD2Q8IZ73 545 aaKnown RBP12.7□□□□□ -0.38
VIPAS39-211ENST00000557658 STAMBPL1Q96FJ0 436 aa12.7□□□□□ -0.38
VIPAS39-211ENST00000557658 DYDC2Q96IM9 177 aa12.7□□□□□ -0.38
VIPAS39-211ENST00000557658 FIZ1Q96SL8 496 aa12.7□□□□□ -0.38
VIPAS39-211ENST00000557658 ECT2Q9H8V3 914 aa12.7□□□□□ -0.38
VIPAS39-211ENST00000557658 ANKRD63C9JTQ0 380 aa12.7□□□□□ -0.38
VIPAS39-211ENST00000557658 TULP1O00294 542 aaPredicted RBP12.7□□□□□ -0.38
VIPAS39-211ENST00000557658 MTA2O94776 668 aa12.7□□□□□ -0.38
VIPAS39-211ENST00000557658 SLITRK3O94933 977 aa12.7□□□□□ -0.38
VIPAS39-211ENST00000557658 ECEL1O95672 775 aa12.7□□□□□ -0.38
VIPAS39-211ENST00000557658 PYGMP11217 842 aa12.7□□□□□ -0.38
VIPAS39-211ENST00000557658 PSEN1P49768 467 aa12.7□□□□□ -0.38
VIPAS39-211ENST00000557658 MAP2K1Q02750 393 aaPredicted RBP12.7□□□□□ -0.38
VIPAS39-211ENST00000557658 MYO1EQ12965 1108 aa12.7□□□□□ -0.38
VIPAS39-211ENST00000557658 IKQ13123 557 aaPredicted RBP12.7□□□□□ -0.38
VIPAS39-211ENST00000557658 ODR4Q5SWX8 454 aa12.7□□□□□ -0.38
VIPAS39-211ENST00000557658 CDC42EP5Q6NZY7 148 aa12.7□□□□□ -0.38
VIPAS39-211ENST00000557658 SLC9A9Q8IVB4 645 aa12.7□□□□□ -0.38
VIPAS39-211ENST00000557658 SYCP3Q8IZU3 236 aa12.7□□□□□ -0.38
VIPAS39-211ENST00000557658 LMO3Q8TAP4 145 aa12.7□□□□□ -0.38
VIPAS39-211ENST00000557658 ARHGEF2Q92974 986 aaKnown RBP12.7□□□□□ -0.38
VIPAS39-211ENST00000557658 SERPINB12Q96P63 405 aa12.7□□□□□ -0.38
VIPAS39-211ENST00000557658 FGFR1OP2Q9NVK5 253 aa12.7□□□□□ -0.38
VIPAS39-211ENST00000557658 BTAF1O14981 1849 aa12.69□□□□□ -0.38
VIPAS39-211ENST00000557658 TCP11X1B4DZS4 312 aa12.69□□□□□ -0.38
VIPAS39-211ENST00000557658 SPOPO43791 374 aa12.69□□□□□ -0.38
VIPAS39-211ENST00000557658 ALADP13716 330 aa12.69□□□□□ -0.38
VIPAS39-211ENST00000557658 HOXA13P31271 388 aaPredicted RBP12.69□□□□□ -0.38
VIPAS39-211ENST00000557658 MYBPC2Q14324 1141 aa12.69□□□□□ -0.38
VIPAS39-211ENST00000557658 LONRF1Q17RB8 773 aa12.69□□□□□ -0.38
VIPAS39-211ENST00000557658 GALNTL6Q49A17 601 aa12.69□□□□□ -0.38
VIPAS39-211ENST00000557658 C12orf50Q8NA57 414 aaPredicted RBP12.69□□□□□ -0.38
VIPAS39-211ENST00000557658 RDH13Q8NBN7 331 aa12.69□□□□□ -0.38
VIPAS39-211ENST00000557658 MGARPQ8TDB4 240 aa12.69□□□□□ -0.38
VIPAS39-211ENST00000557658 CD101Q93033 1021 aa12.69□□□□□ -0.38
VIPAS39-211ENST00000557658 IFT74Q96LB3 600 aa12.69□□□□□ -0.38
VIPAS39-211ENST00000557658 COA1Q9GZY4 146 aa12.69□□□□□ -0.38
VIPAS39-211ENST00000557658 CDC42EP4Q9H3Q1 356 aaKnown RBP12.69□□□□□ -0.38
VIPAS39-211ENST00000557658 C15orf41Q9Y2V0 281 aa12.69□□□□□ -0.38
VIPAS39-211ENST00000557658 QSER1Q2KHR3 1735 aa12.69□□□□□ -0.38
VIPAS39-211ENST00000557658 TCRBV7S2A1N4TA0A589 114 aa12.69□□□□□ -0.38
VIPAS39-211ENST00000557658 TMEM120BA0PK00 339 aa12.69□□□□□ -0.38
VIPAS39-211ENST00000557658 O00370 1275 aa12.69□□□□□ -0.38
VIPAS39-211ENST00000557658 ANP32DO95626 131 aa12.69□□□□□ -0.38
VIPAS39-211ENST00000557658 COPS2P61201 443 aa12.69□□□□□ -0.38
VIPAS39-211ENST00000557658 KCNJ2P63252 427 aa12.69□□□□□ -0.38
VIPAS39-211ENST00000557658 NAA25Q14CX7 972 aa12.69□□□□□ -0.38
VIPAS39-211ENST00000557658 LRRC14Q15048 493 aa12.69□□□□□ -0.38
VIPAS39-211ENST00000557658 CERKLQ49MI3 558 aaPredicted RBP12.69□□□□□ -0.38
VIPAS39-211ENST00000557658 LRCH2Q5VUJ6 765 aa12.69□□□□□ -0.38
VIPAS39-211ENST00000557658 RNF207Q6ZRF8 634 aa12.69□□□□□ -0.38
VIPAS39-211ENST00000557658 MIGA2Q7L4E1 593 aa12.69□□□□□ -0.38
VIPAS39-211ENST00000557658 OTOP1Q7RTM1 612 aa12.69□□□□□ -0.38
VIPAS39-211ENST00000557658 CERS5Q8N5B7 392 aa12.69□□□□□ -0.38
VIPAS39-211ENST00000557658 NSMCE1Q8WV22 266 aa12.69□□□□□ -0.38
VIPAS39-211ENST00000557658 NOP53Q9NZM5 478 aaKnown RBP12.69□□□□□ -0.38
VIPAS39-211ENST00000557658 KCND2Q9NZV8 630 aa12.69□□□□□ -0.38
VIPAS39-211ENST00000557658 WHRNQ9P202 907 aa12.69□□□□□ -0.38
VIPAS39-211ENST00000557658 EMSYQ7Z589 1322 aa12.68□□□□□ -0.38
VIPAS39-211ENST00000557658 IGLV3-22A0A075B6J6 115 aa12.68□□□□□ -0.38
VIPAS39-211ENST00000557658 RIMBP2O15034 1052 aa12.68□□□□□ -0.38
VIPAS39-211ENST00000557658 CHMP2AO43633 222 aa12.68□□□□□ -0.38
VIPAS39-211ENST00000557658 SLURP2P0DP57 97 aa12.68□□□□□ -0.38
VIPAS39-211ENST00000557658 GZMAP12544 262 aa12.68□□□□□ -0.38
VIPAS39-211ENST00000557658 KCNJ1P48048 391 aa12.68□□□□□ -0.38
VIPAS39-211ENST00000557658 SCNN1DP51172 638 aa12.68□□□□□ -0.38
VIPAS39-211ENST00000557658 ALDH5A1P51649 535 aaPredicted RBP12.68□□□□□ -0.38
VIPAS39-211ENST00000557658 SYDE2Q5VT97 1194 aa12.68□□□□□ -0.38
VIPAS39-211ENST00000557658 NUGGCQ68CJ6 796 aa12.68□□□□□ -0.38
VIPAS39-211ENST00000557658 ZNF746Q6NUN9 644 aaPredicted RBP12.68□□□□□ -0.38
VIPAS39-211ENST00000557658 INTS8Q75QN2 995 aaKnown RBP12.68□□□□□ -0.38
VIPAS39-211ENST00000557658 ARHGEF19Q8IW93 802 aa12.68□□□□□ -0.38
VIPAS39-211ENST00000557658 MAB21L3Q8N8X9 362 aa12.68□□□□□ -0.38
VIPAS39-211ENST00000557658 KLHL29Q96CT2 875 aa12.68□□□□□ -0.38
VIPAS39-211ENST00000557658 NACC1Q96RE7 527 aa12.68□□□□□ -0.38
VIPAS39-211ENST00000557658 ARL2BPQ9Y2Y0 163 aa12.68□□□□□ -0.38
VIPAS39-211ENST00000557658 IGF2BP3O00425 579 aaKnown RBP eCLIP12.68□□□□□ -0.38
VIPAS39-211ENST00000557658 ZBTB39O15060 712 aa12.68□□□□□ -0.38
VIPAS39-211ENST00000557658 P4HA2O15460 535 aa12.68□□□□□ -0.38
VIPAS39-211ENST00000557658 ACSL3O95573 720 aa12.68□□□□□ -0.38
VIPAS39-211ENST00000557658 MUTP22033 750 aa12.68□□□□□ -0.38
VIPAS39-211ENST00000557658 RWDD2BP57060 319 aa12.68□□□□□ -0.38
VIPAS39-211ENST00000557658 BNIP1Q12981 228 aa12.68□□□□□ -0.38
VIPAS39-211ENST00000557658 RRP1BQ14684 758 aaKnown RBP12.68□□□□□ -0.38
VIPAS39-211ENST00000557658 SIX1Q15475 284 aaPredicted RBP12.68□□□□□ -0.38
VIPAS39-211ENST00000557658 ZNF568Q3ZCX4 644 aa12.68□□□□□ -0.38
VIPAS39-211ENST00000557658 OTUD6AQ7L8S5 288 aa12.68□□□□□ -0.38
VIPAS39-211ENST00000557658 SPATA21Q7Z572 469 aa12.68□□□□□ -0.38
VIPAS39-211ENST00000557658 ZNF564Q8TBZ8 553 aaPredicted RBP12.68□□□□□ -0.38
VIPAS39-211ENST00000557658 AGAP11Q8TF27 550 aa12.68□□□□□ -0.38
VIPAS39-211ENST00000557658 L3MBTL3Q96JM7 780 aaPredicted RBP12.68□□□□□ -0.38
VIPAS39-211ENST00000557658 DDX23Q9BUQ8 820 aaKnown RBP12.68□□□□□ -0.38
VIPAS39-211ENST00000557658 PLVAPQ9BX97 442 aa12.68□□□□□ -0.38
VIPAS39-211ENST00000557658 LRRC19Q9H756 370 aa12.68□□□□□ -0.38
VIPAS39-211ENST00000557658 DNAJC18Q9H819 358 aa12.68□□□□□ -0.38
VIPAS39-211ENST00000557658 KCNK9Q9NPC2 374 aa12.68□□□□□ -0.38
VIPAS39-211ENST00000557658 BATF3Q9NR55 127 aa12.68□□□□□ -0.38
VIPAS39-211ENST00000557658 GGT7Q9UJ14 662 aa12.68□□□□□ -0.38
VIPAS39-211ENST00000557658 L3MBTL1Q9Y468 752 aa12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms