RNA–Protein interactions for RNA: ENST00000557588.5

ABCD4-228, Transcript of ATP binding cassette subfamily D member 4, humanhuman

TSL 3 BASIC

Gene ABCD4, Length 763 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD4-228ENST00000557588 TDRD15B5MCY1 1934 aaKnown RBP20.53■□□□□ 0.88
ABCD4-228ENST00000557588 CYP3A7-CYP3A51PA0A087WV96 503 aa20.53■□□□□ 0.88
ABCD4-228ENST00000557588 DDX11L8A8MPP1 907 aa20.53■□□□□ 0.88
ABCD4-228ENST00000557588 CYP3A7P24462 503 aa20.53■□□□□ 0.88
ABCD4-228ENST00000557588 PSMC5P62195 406 aa20.53■□□□□ 0.88
ABCD4-228ENST00000557588 NTRK3Q16288 839 aa20.53■□□□□ 0.88
ABCD4-228ENST00000557588 PLA2G4FQ68DD2 849 aa20.53■□□□□ 0.88
ABCD4-228ENST00000557588 CNNM3Q8NE01 707 aa20.53■□□□□ 0.88
ABCD4-228ENST00000557588 TBCKQ8TEA7 893 aa20.53■□□□□ 0.88
ABCD4-228ENST00000557588 SLC7A3Q8WY07 619 aa20.53■□□□□ 0.88
ABCD4-228ENST00000557588 MBOAT7Q96N66 472 aa20.53■□□□□ 0.88
ABCD4-228ENST00000557588 MINDY3Q9H8M7 445 aa20.53■□□□□ 0.88
ABCD4-228ENST00000557588 MYH15Q9Y2K3 1946 aa20.53■□□□□ 0.88
ABCD4-228ENST00000557588 KMT2BQ9UMN6 2715 aaPredicted RBP20.52■□□□□ 0.88
ABCD4-228ENST00000557588 CACNA1IQ9P0X4 2223 aa20.52■□□□□ 0.88
ABCD4-228ENST00000557588 TDP2O95551 362 aa20.52■□□□□ 0.88
ABCD4-228ENST00000557588 GLULP15104 373 aa20.52■□□□□ 0.88
ABCD4-228ENST00000557588 OR1G1P47890 313 aa20.52■□□□□ 0.88
ABCD4-228ENST00000557588 FGD1P98174 961 aa20.52■□□□□ 0.88
ABCD4-228ENST00000557588 AKAP17AQ02040 695 aaKnown RBP20.52■□□□□ 0.88
ABCD4-228ENST00000557588 DCLRE1AQ6PJP8 1040 aa20.52■□□□□ 0.88
ABCD4-228ENST00000557588 GET4Q7L5D6 327 aaPredicted RBP20.52■□□□□ 0.88
ABCD4-228ENST00000557588 GPR65Q8IYL9 337 aa20.52■□□□□ 0.88
ABCD4-228ENST00000557588 SUMF1Q8NBK3 374 aa20.52■□□□□ 0.88
ABCD4-228ENST00000557588 SMG8Q8ND04 991 aaKnown RBP20.52■□□□□ 0.88
ABCD4-228ENST00000557588 PSPC1Q8WXF1 523 aaKnown RBP20.52■□□□□ 0.88
ABCD4-228ENST00000557588 C22orf23Q9BZE7 217 aa20.52■□□□□ 0.88
ABCD4-228ENST00000557588 NT5C3AQ9H0P0 336 aa20.52■□□□□ 0.88
ABCD4-228ENST00000557588 CHST7Q9NS84 486 aa20.52■□□□□ 0.88
ABCD4-228ENST00000557588 PPME1Q9Y570 386 aa20.52■□□□□ 0.88
ABCD4-228ENST00000557588 NUMBLQ9Y6R0 609 aa20.52■□□□□ 0.88
ABCD4-228ENST00000557588 ARID2Q68CP9 1835 aa20.52■□□□□ 0.88
ABCD4-228ENST00000557588 POTEMA6NI47 508 aa20.51■□□□□ 0.87
ABCD4-228ENST00000557588 MYBP10242 640 aa20.51■□□□□ 0.87
ABCD4-228ENST00000557588 STARD6P59095 220 aa20.51■□□□□ 0.87
ABCD4-228ENST00000557588 POTEGQ6S5H5 508 aa20.51■□□□□ 0.87
ABCD4-228ENST00000557588 MOXD1Q6UVY6 613 aa20.51■□□□□ 0.87
ABCD4-228ENST00000557588 MAML2Q8IZL2 1156 aaPredicted RBP20.51■□□□□ 0.87
ABCD4-228ENST00000557588 BRF1Q92994 677 aa20.51■□□□□ 0.87
ABCD4-228ENST00000557588 PRKD2Q9BZL6 878 aa20.51■□□□□ 0.87
ABCD4-228ENST00000557588 FOXQ1Q9C009 403 aa20.51■□□□□ 0.87
ABCD4-228ENST00000557588 DHX33Q9H6R0 707 aaKnown RBP20.51■□□□□ 0.87
ABCD4-228ENST00000557588 PIDD1Q9HB75 910 aa20.51■□□□□ 0.87
ABCD4-228ENST00000557588 SH3GLB2Q9NR46 395 aa20.51■□□□□ 0.87
ABCD4-228ENST00000557588 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP20.51■□□□□ 0.87
ABCD4-228ENST00000557588 IPPQ9Y573 584 aa20.51■□□□□ 0.87
ABCD4-228ENST00000557588 ARL5CA6NH57 179 aa20.5■□□□□ 0.87
ABCD4-228ENST00000557588 F8W810 466 aa20.5■□□□□ 0.87
ABCD4-228ENST00000557588 TGM5O43548 720 aa20.5■□□□□ 0.87
ABCD4-228ENST00000557588 SPATA31D3P0C874 917 aa20.5■□□□□ 0.87
ABCD4-228ENST00000557588 ITGA4P13612 1032 aa20.5■□□□□ 0.87
ABCD4-228ENST00000557588 MLH1P40692 756 aa20.5■□□□□ 0.87
ABCD4-228ENST00000557588 SPATA31D4Q6ZUB0 917 aa20.5■□□□□ 0.87
ABCD4-228ENST00000557588 Q6ZUG5 572 aa20.5■□□□□ 0.87
ABCD4-228ENST00000557588 EXOC8Q8IYI6 725 aa20.5■□□□□ 0.87
ABCD4-228ENST00000557588 DCLK2Q8N568 766 aa20.5■□□□□ 0.87
ABCD4-228ENST00000557588 PRPF31Q8WWY3 499 aaKnown RBP20.5■□□□□ 0.87
ABCD4-228ENST00000557588 SLC26A6Q9BXS9 759 aa20.5■□□□□ 0.87
ABCD4-228ENST00000557588 FNIP2Q9P278 1114 aa20.5■□□□□ 0.87
ABCD4-228ENST00000557588 ZFP37Q9Y6Q3 630 aaPredicted RBP20.5■□□□□ 0.87
ABCD4-228ENST00000557588 KINO60870 393 aaKnown RBP20.49■□□□□ 0.87
ABCD4-228ENST00000557588 SRGAP2CP0DJJ0 459 aa20.49■□□□□ 0.87
ABCD4-228ENST00000557588 CPA1P15085 419 aa20.49■□□□□ 0.87
ABCD4-228ENST00000557588 IFNAR1P17181 557 aa20.49■□□□□ 0.87
ABCD4-228ENST00000557588 RFC5P40937 340 aa20.49■□□□□ 0.87
ABCD4-228ENST00000557588 QARSP47897 775 aaKnown RBP20.49■□□□□ 0.87
ABCD4-228ENST00000557588 NPEPPSP55786 919 aa20.49■□□□□ 0.87
ABCD4-228ENST00000557588 LAMTOR4Q0VGL1 99 aa20.49■□□□□ 0.87
ABCD4-228ENST00000557588 ZNF528Q3MIS6 628 aa20.49■□□□□ 0.87
ABCD4-228ENST00000557588 BMP2KLQ5H9B9 411 aa20.49■□□□□ 0.87
ABCD4-228ENST00000557588 LILRA6Q6PI73 481 aa20.49■□□□□ 0.87
ABCD4-228ENST00000557588 FBXL16Q8N461 479 aa20.49■□□□□ 0.87
ABCD4-228ENST00000557588 CCDC51Q96ER9 411 aa20.49■□□□□ 0.87
ABCD4-228ENST00000557588 BORCS6Q96GS4 357 aa20.49■□□□□ 0.87
ABCD4-228ENST00000557588 SHDQ96IW2 340 aa20.49■□□□□ 0.87
ABCD4-228ENST00000557588 GAD1Q99259 594 aa20.49■□□□□ 0.87
ABCD4-228ENST00000557588 PCDHA4Q9UN74 947 aa20.49■□□□□ 0.87
ABCD4-228ENST00000557588 TPRP12270 2363 aaKnown RBP20.49■□□□□ 0.87
ABCD4-228ENST00000557588 COL4A3Q01955 1670 aa20.48■□□□□ 0.87
ABCD4-228ENST00000557588 SPTLC1O15269 473 aa20.48■□□□□ 0.87
ABCD4-228ENST00000557588 GAS2O43903 313 aaKnown RBP20.48■□□□□ 0.87
ABCD4-228ENST00000557588 TSPAN1O60635 241 aa20.48■□□□□ 0.87
ABCD4-228ENST00000557588 NR1I2O75469 434 aa20.48■□□□□ 0.87
ABCD4-228ENST00000557588 SCNN1GP51170 649 aa20.48■□□□□ 0.87
ABCD4-228ENST00000557588 NLRP5P59047 1200 aa20.48■□□□□ 0.87
ABCD4-228ENST00000557588 CREMQ03060 361 aa20.48■□□□□ 0.87
ABCD4-228ENST00000557588 PPP2R5CQ13362 524 aa20.48■□□□□ 0.87
ABCD4-228ENST00000557588 PCBP1Q15365 356 aaKnown RBP eCLIP20.48■□□□□ 0.87
ABCD4-228ENST00000557588 PALB2Q86YC2 1186 aa20.48■□□□□ 0.87
ABCD4-228ENST00000557588 ZNF579Q8NAF0 562 aaKnown RBP20.48■□□□□ 0.87
ABCD4-228ENST00000557588 TMEM143Q96AN5 459 aa20.48■□□□□ 0.87
ABCD4-228ENST00000557588 CEP170P1Q96L14 293 aa20.48■□□□□ 0.87
ABCD4-228ENST00000557588 B3GALT6Q96L58 329 aa20.48■□□□□ 0.87
ABCD4-228ENST00000557588 ZFP42Q96MM3 310 aa20.48■□□□□ 0.87
ABCD4-228ENST00000557588 DDX23Q9BUQ8 820 aaKnown RBP20.48■□□□□ 0.87
ABCD4-228ENST00000557588 EIF2AQ9BY44 585 aaKnown RBP20.48■□□□□ 0.87
ABCD4-228ENST00000557588 AGXT2Q9BYV1 514 aa20.48■□□□□ 0.87
ABCD4-228ENST00000557588 RNF39Q9H2S5 420 aa20.48■□□□□ 0.87
ABCD4-228ENST00000557588 VAV3Q9UKW4 847 aa20.48■□□□□ 0.87
ABCD4-228ENST00000557588 ACACBO00763 2458 aa20.47■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms