RNA–Protein interactions for RNA: ENST00000557076.5

SCFD1-223, Transcript of sec1 family domain containing 1, human

TSL 3

Gene SCFD1, Length 743 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SCFD1-223	ENST00000557076	DYNLL1	P63167	89 aa	Known RBP	5.67	□□□□□ -1.5
SCFD1-223	ENST00000557076	BFSP2	Q13515	415 aa		5.67	□□□□□ -1.5
SCFD1-223	ENST00000557076	SMAD2	Q15796	467 aa	Known RBP	5.67	□□□□□ -1.5
SCFD1-223	ENST00000557076	RALGPS1	Q5JS13	557 aa		5.67	□□□□□ -1.5
SCFD1-223	ENST00000557076	ATG14	Q6ZNE5	492 aa		5.67	□□□□□ -1.5
SCFD1-223	ENST00000557076	NOL8	Q76FK4	1167 aa	Known RBP	5.67	□□□□□ -1.5
SCFD1-223	ENST00000557076	ARMCX2	Q7L311	632 aa		5.67	□□□□□ -1.5
SCFD1-223	ENST00000557076	SUGP1	Q8IWZ8	645 aa	Known RBP	5.67	□□□□□ -1.5
SCFD1-223	ENST00000557076	CCDC144CP	Q8IYA2	1237 aa		5.67	□□□□□ -1.5
SCFD1-223	ENST00000557076	MRPL38	Q96DV4	380 aa	Known RBP	5.67	□□□□□ -1.5
SCFD1-223	ENST00000557076	TMEM87B	Q96K49	555 aa		5.67	□□□□□ -1.5
SCFD1-223	ENST00000557076	CCDC17	Q96LX7	622 aa		5.67	□□□□□ -1.5
SCFD1-223	ENST00000557076	TRMT13	Q9NUP7	481 aa	Known RBP	5.67	□□□□□ -1.5
SCFD1-223	ENST00000557076	TJP2	Q9UDY2	1190 aa		5.67	□□□□□ -1.5
SCFD1-223	ENST00000557076	MUTYH	Q9UIF7	546 aa		5.67	□□□□□ -1.5
SCFD1-223	ENST00000557076	RIPK3	Q9Y572	518 aa		5.67	□□□□□ -1.5
SCFD1-223	ENST00000557076	MYO7A	Q13402	2215 aa		5.67	□□□□□ -1.5
SCFD1-223	ENST00000557076	ACACB	O00763	2458 aa		5.67	□□□□□ -1.5
SCFD1-223	ENST00000557076	DMXL1	Q9Y485	3027 aa		5.66	□□□□□ -1.5
SCFD1-223	ENST00000557076	LRRC37A2	A6NM11	1700 aa		5.66	□□□□□ -1.5
SCFD1-223	ENST00000557076	NCOR2	Q9Y618	2525 aa		5.66	□□□□□ -1.5
SCFD1-223	ENST00000557076	ABHD14A-ACY1	A0A1B0GW23	586 aa		5.66	□□□□□ -1.5
SCFD1-223	ENST00000557076	LINC01553	A4QN01	128 aa		5.66	□□□□□ -1.5
SCFD1-223	ENST00000557076	ASB14	A6NK59	587 aa		5.66	□□□□□ -1.5
SCFD1-223	ENST00000557076	EFCAB14	O75071	495 aa		5.66	□□□□□ -1.5
SCFD1-223	ENST00000557076	TPP2	P29144	1249 aa	Predicted RBP	5.66	□□□□□ -1.5
SCFD1-223	ENST00000557076	AVPR2	P30518	371 aa		5.66	□□□□□ -1.5
SCFD1-223	ENST00000557076	LTBR	P36941	435 aa		5.66	□□□□□ -1.5
SCFD1-223	ENST00000557076	KCNJ6	P48051	423 aa		5.66	□□□□□ -1.5
SCFD1-223	ENST00000557076	HK2	P52789	917 aa		5.66	□□□□□ -1.5
SCFD1-223	ENST00000557076	WDR5	P61964	334 aa	Known RBP	5.66	□□□□□ -1.5
SCFD1-223	ENST00000557076	PSMC6	P62333	389 aa		5.66	□□□□□ -1.5
SCFD1-223	ENST00000557076	ZXDA	P98168	799 aa		5.66	□□□□□ -1.5
SCFD1-223	ENST00000557076	SEPT6	Q14141	434 aa		5.66	□□□□□ -1.5
SCFD1-223	ENST00000557076	GPNMB	Q14956	572 aa		5.66	□□□□□ -1.5
SCFD1-223	ENST00000557076	LRRFIP1	Q32MZ4	808 aa	Known RBP	5.66	□□□□□ -1.5
SCFD1-223	ENST00000557076	CCDC158	Q5M9N0	1113 aa		5.66	□□□□□ -1.5
SCFD1-223	ENST00000557076	DIEXF	Q68CQ4	756 aa	Known RBP	5.66	□□□□□ -1.5
SCFD1-223	ENST00000557076	NFRKB	Q6P4R8	1299 aa		5.66	□□□□□ -1.5
SCFD1-223	ENST00000557076	AGMO	Q6ZNB7	445 aa		5.66	□□□□□ -1.5
SCFD1-223	ENST00000557076	TTLL10	Q6ZVT0	673 aa		5.66	□□□□□ -1.5
SCFD1-223	ENST00000557076	TLK2	Q86UE8	772 aa		5.66	□□□□□ -1.5
SCFD1-223	ENST00000557076	CREG2	Q8IUH2	290 aa		5.66	□□□□□ -1.5
SCFD1-223	ENST00000557076	LILRA2	Q8N149	483 aa		5.66	□□□□□ -1.5
SCFD1-223	ENST00000557076	PRPF38A	Q8NAV1	312 aa	Known RBP	5.66	□□□□□ -1.5
SCFD1-223	ENST00000557076	CHST13	Q8NET6	341 aa		5.66	□□□□□ -1.5
SCFD1-223	ENST00000557076	PPIL4	Q8WUA2	492 aa	Known RBP eCLIP	5.66	□□□□□ -1.5
SCFD1-223	ENST00000557076	FGD4	Q96M96	766 aa		5.66	□□□□□ -1.5
SCFD1-223	ENST00000557076	KANSL2	Q9H9L4	492 aa		5.66	□□□□□ -1.5
SCFD1-223	ENST00000557076	FBXO28	Q9NVF7	368 aa		5.66	□□□□□ -1.5
SCFD1-223	ENST00000557076	SWAP70	Q9UH65	585 aa		5.66	□□□□□ -1.5
SCFD1-223	ENST00000557076	FBXO40	Q9UH90	709 aa		5.66	□□□□□ -1.5
SCFD1-223	ENST00000557076	ADAM30	Q9UKF2	790 aa		5.66	□□□□□ -1.5
SCFD1-223	ENST00000557076	INSL6	Q9Y581	213 aa		5.66	□□□□□ -1.5
SCFD1-223	ENST00000557076	ATRX	P46100	2492 aa		5.66	□□□□□ -1.5
SCFD1-223	ENST00000557076	MYH13	Q9UKX3	1938 aa		5.66	□□□□□ -1.5
SCFD1-223	ENST00000557076	PKD1L2	Q7Z442	2459 aa		5.65	□□□□□ -1.5
SCFD1-223	ENST00000557076	C11orf97	A0A1B0GVM6	126 aa	Predicted RBP	5.65	□□□□□ -1.5
SCFD1-223	ENST00000557076		H3BNC9	293 aa		5.65	□□□□□ -1.5
SCFD1-223	ENST00000557076	ETV2	O00321	342 aa	Predicted RBP	5.65	□□□□□ -1.5
SCFD1-223	ENST00000557076	SRGAP3	O43295	1099 aa		5.65	□□□□□ -1.5
SCFD1-223	ENST00000557076	KPNA6	O60684	536 aa		5.65	□□□□□ -1.5
SCFD1-223	ENST00000557076	ZBED4	O75132	1171 aa		5.65	□□□□□ -1.5
SCFD1-223	ENST00000557076	KRT37	O76014	449 aa		5.65	□□□□□ -1.5
SCFD1-223	ENST00000557076	CXCL10	P02778	98 aa		5.65	□□□□□ -1.5
SCFD1-223	ENST00000557076	P4HB	P07237	508 aa	Known RBP	5.65	□□□□□ -1.5
SCFD1-223	ENST00000557076	NBL1	P41271	181 aa		5.65	□□□□□ -1.5
SCFD1-223	ENST00000557076	ICA1	Q05084	483 aa		5.65	□□□□□ -1.5
SCFD1-223	ENST00000557076	G3BP1	Q13283	466 aa	Known RBP eCLIP	5.65	□□□□□ -1.5
SCFD1-223	ENST00000557076	MTX1	Q13505	466 aa		5.65	□□□□□ -1.5
SCFD1-223	ENST00000557076	TIGD5	Q53EQ6	642 aa		5.65	□□□□□ -1.5
SCFD1-223	ENST00000557076	TCEAL5	Q5H9L2	206 aa		5.65	□□□□□ -1.5
SCFD1-223	ENST00000557076	SNRNP48	Q6IEG0	339 aa	Known RBP	5.65	□□□□□ -1.5
SCFD1-223	ENST00000557076	TAPT1	Q6NXT6	567 aa		5.65	□□□□□ -1.5
SCFD1-223	ENST00000557076	ASCL5	Q7RTU5	278 aa		5.65	□□□□□ -1.5
SCFD1-223	ENST00000557076	MCAT	Q8IVS2	390 aa	Known RBP	5.65	□□□□□ -1.5
SCFD1-223	ENST00000557076	ANKRD35	Q8N283	1001 aa		5.65	□□□□□ -1.5
SCFD1-223	ENST00000557076	FAM133A	Q8N9E0	248 aa		5.65	□□□□□ -1.5
SCFD1-223	ENST00000557076	PDZD8	Q8NEN9	1154 aa		5.65	□□□□□ -1.5
SCFD1-223	ENST00000557076	DPH2	Q9BQC3	489 aa	Predicted RBP	5.65	□□□□□ -1.5
SCFD1-223	ENST00000557076	FSD1	Q9BTV5	496 aa		5.65	□□□□□ -1.5
SCFD1-223	ENST00000557076	MIR1-1HG	Q9H1L0	117 aa		5.65	□□□□□ -1.5
SCFD1-223	ENST00000557076	ADAMTS10	Q9H324	1103 aa		5.65	□□□□□ -1.5
SCFD1-223	ENST00000557076	GPR108	Q9NPR9	543 aa		5.65	□□□□□ -1.5
SCFD1-223	ENST00000557076	FAM86C1	Q9NVL1	165 aa		5.65	□□□□□ -1.5
SCFD1-223	ENST00000557076	GPATCH2	Q9NW75	528 aa		5.65	□□□□□ -1.5
SCFD1-223	ENST00000557076	MTUS1	Q9ULD2	1270 aa		5.65	□□□□□ -1.5
SCFD1-223	ENST00000557076	PCDHB5	Q9Y5E4	795 aa		5.65	□□□□□ -1.5
SCFD1-223	ENST00000557076	ZNFX1	Q9P2E3	1918 aa	Known RBP	5.65	□□□□□ -1.51
SCFD1-223	ENST00000557076	NCAN	O14594	1321 aa		5.65	□□□□□ -1.51
SCFD1-223	ENST00000557076	FRYL	O94915	3013 aa		5.65	□□□□□ -1.51
SCFD1-223	ENST00000557076	ZNF292	O60281	2723 aa		5.64	□□□□□ -1.51
SCFD1-223	ENST00000557076	PRR23A	A6NEV1	266 aa		5.64	□□□□□ -1.51
SCFD1-223	ENST00000557076		H0Y858	1186 aa		5.64	□□□□□ -1.51
SCFD1-223	ENST00000557076	STXBP3	O00186	592 aa		5.64	□□□□□ -1.51
SCFD1-223	ENST00000557076	PRRG2	O14669	202 aa		5.64	□□□□□ -1.51
SCFD1-223	ENST00000557076	MBTPS2	O43462	519 aa		5.64	□□□□□ -1.51
SCFD1-223	ENST00000557076	EYA4	O95677	639 aa		5.64	□□□□□ -1.51
SCFD1-223	ENST00000557076	RLBP1	P12271	317 aa		5.64	□□□□□ -1.51
SCFD1-223	ENST00000557076	EEF2	P13639	858 aa	Known RBP	5.64	□□□□□ -1.51

Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms