RNA–Protein interactions for RNA: ENST00000556867.1

TDP1-216, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 2

Gene TDP1, Length 748 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-216ENST00000556867 REEP2Q9BRK0 252 aa25.19■■□□□ 1.62
TDP1-216ENST00000556867 TMEM134Q9H6X4 195 aa25.19■■□□□ 1.62
TDP1-216ENST00000556867 UBN1Q9NPG3 1134 aa25.19■■□□□ 1.62
TDP1-216ENST00000556867 DAXXQ9UER7 740 aaPredicted RBP25.19■■□□□ 1.62
TDP1-216ENST00000556867 CFAP45Q9UL16 551 aa25.19■■□□□ 1.62
TDP1-216ENST00000556867 K7ERI5 159 aa25.18■■□□□ 1.62
TDP1-216ENST00000556867 CUTAO60888 179 aa25.18■■□□□ 1.62
TDP1-216ENST00000556867 NPTXRO95502 500 aa25.18■■□□□ 1.62
TDP1-216ENST00000556867 LIG1P18858 919 aa25.18■■□□□ 1.62
TDP1-216ENST00000556867 CACNB1Q02641 598 aaPredicted RBP25.18■■□□□ 1.62
TDP1-216ENST00000556867 DNM1Q05193 864 aaKnown RBP25.18■■□□□ 1.62
TDP1-216ENST00000556867 TIGD5Q53EQ6 642 aa25.18■■□□□ 1.62
TDP1-216ENST00000556867 CCDC73Q6ZRK6 1079 aa25.18■■□□□ 1.62
TDP1-216ENST00000556867 HACE1Q8IYU2 909 aa25.18■■□□□ 1.62
TDP1-216ENST00000556867 SPPL3Q8TCT6 385 aa25.18■■□□□ 1.62
TDP1-216ENST00000556867 ZNF558Q96NG5 402 aa25.18■■□□□ 1.62
TDP1-216ENST00000556867 NXF3Q9H4D5 531 aaKnown RBP25.18■■□□□ 1.62
TDP1-216ENST00000556867 ALG13Q9NP73 1137 aaKnown RBP25.18■■□□□ 1.62
TDP1-216ENST00000556867 TBC1D13Q9NVG8 400 aa25.18■■□□□ 1.62
TDP1-216ENST00000556867 INPP5FQ9Y2H2 1132 aa25.18■■□□□ 1.62
TDP1-216ENST00000556867 HES2Q9Y543 173 aa25.18■■□□□ 1.62
TDP1-216ENST00000556867 BRWD1Q9NSI6 2320 aa25.17■■□□□ 1.62
TDP1-216ENST00000556867 INPPL1O15357 1258 aa25.17■■□□□ 1.62
TDP1-216ENST00000556867 TMEM132AQ24JP5 1023 aa25.17■■□□□ 1.62
TDP1-216ENST00000556867 NT5DC1Q5TFE4 455 aa25.17■■□□□ 1.62
TDP1-216ENST00000556867 KCNT2Q6UVM3 1135 aa25.17■■□□□ 1.62
TDP1-216ENST00000556867 TAS1R3Q7RTX0 852 aa25.17■■□□□ 1.62
TDP1-216ENST00000556867 URGCPQ8TCY9 931 aa25.17■■□□□ 1.62
TDP1-216ENST00000556867 RNF39Q9H2S5 420 aa25.17■■□□□ 1.62
TDP1-216ENST00000556867 LARSQ9P2J5 1176 aaKnown RBP25.17■■□□□ 1.62
TDP1-216ENST00000556867 USP20Q9Y2K6 914 aa25.17■■□□□ 1.62
TDP1-216ENST00000556867 ZMYM2Q9UBW7 1377 aa25.17■■□□□ 1.62
TDP1-216ENST00000556867 A0A087X0B3 334 aa25.16■■□□□ 1.62
TDP1-216ENST00000556867 SLC16A4O15374 487 aa25.16■■□□□ 1.62
TDP1-216ENST00000556867 FGF18O76093 207 aa25.16■■□□□ 1.62
TDP1-216ENST00000556867 PPM1AP35813 382 aa25.16■■□□□ 1.62
TDP1-216ENST00000556867 ZNF131P52739 623 aa25.16■■□□□ 1.62
TDP1-216ENST00000556867 SMTNP53814 917 aa25.16■■□□□ 1.62
TDP1-216ENST00000556867 UBE3AQ05086 875 aa25.16■■□□□ 1.62
TDP1-216ENST00000556867 GIT2Q14161 759 aa25.16■■□□□ 1.62
TDP1-216ENST00000556867 THNSL1Q8IYQ7 743 aa25.16■■□□□ 1.62
TDP1-216ENST00000556867 TMEM161BQ8NDZ6 487 aa25.16■■□□□ 1.62
TDP1-216ENST00000556867 ADPGKQ9BRR6 497 aa25.16■■□□□ 1.62
TDP1-216ENST00000556867 KANSL3Q9P2N6 904 aa25.16■■□□□ 1.62
TDP1-216ENST00000556867 GIT1Q9Y2X7 761 aa25.16■■□□□ 1.62
TDP1-216ENST00000556867 CARNS1A5YM72 827 aa25.15■■□□□ 1.62
TDP1-216ENST00000556867 KRT18P05783 430 aaKnown RBP25.15■■□□□ 1.62
TDP1-216ENST00000556867 DNAJB1P25685 340 aa25.15■■□□□ 1.62
TDP1-216ENST00000556867 STAT6P42226 847 aa25.15■■□□□ 1.62
TDP1-216ENST00000556867 CAMK1Q14012 370 aa25.15■■□□□ 1.62
TDP1-216ENST00000556867 DCAF4L1Q3SXM0 396 aa25.15■■□□□ 1.62
TDP1-216ENST00000556867 AXDND1Q5T1B0 1012 aaPredicted RBP25.15■■□□□ 1.62
TDP1-216ENST00000556867 ATF7IP2Q5U623 682 aa25.15■■□□□ 1.62
TDP1-216ENST00000556867 EEF1DP3Q658K8 133 aa25.15■■□□□ 1.62
TDP1-216ENST00000556867 PHF6Q8IWS0 365 aaKnown RBP eCLIP25.15■■□□□ 1.62
TDP1-216ENST00000556867 POF1BQ8WVV4 589 aa25.15■■□□□ 1.62
TDP1-216ENST00000556867 KCNN1Q92952 543 aa25.15■■□□□ 1.62
TDP1-216ENST00000556867 PARVGQ9HBI0 331 aa25.15■■□□□ 1.62
TDP1-216ENST00000556867 TNFSF13BQ9Y275 285 aa25.15■■□□□ 1.62
TDP1-216ENST00000556867 UNC80Q8N2C7 3258 aa25.15■■□□□ 1.62
TDP1-216ENST00000556867 TDRD15B5MCY1 1934 aaKnown RBP25.14■■□□□ 1.62
TDP1-216ENST00000556867 FAM13AO94988 1023 aa25.14■■□□□ 1.62
TDP1-216ENST00000556867 PBX3P40426 434 aa25.14■■□□□ 1.62
TDP1-216ENST00000556867 AFF1P51825 1210 aaKnown RBP25.14■■□□□ 1.62
TDP1-216ENST00000556867 NCKAP1LP55160 1127 aa25.14■■□□□ 1.62
TDP1-216ENST00000556867 BCAR1P56945 870 aa25.14■■□□□ 1.62
TDP1-216ENST00000556867 PLCB3Q01970 1234 aa25.14■■□□□ 1.62
TDP1-216ENST00000556867 RNASELQ05823 741 aaKnown RBP25.14■■□□□ 1.62
TDP1-216ENST00000556867 SHC4Q6S5L8 630 aa25.14■■□□□ 1.62
TDP1-216ENST00000556867 SLC39A11Q8N1S5 342 aa25.14■■□□□ 1.62
TDP1-216ENST00000556867 SLC17A8Q8NDX2 589 aa25.14■■□□□ 1.62
TDP1-216ENST00000556867 APOL6Q9BWW8 343 aa25.14■■□□□ 1.62
TDP1-216ENST00000556867 MRPL4Q9BYD3 311 aaKnown RBP25.14■■□□□ 1.62
TDP1-216ENST00000556867 NSUN3Q9H649 340 aaKnown RBP25.14■■□□□ 1.62
TDP1-216ENST00000556867 NRDE2Q9H7Z3 1164 aa25.14■■□□□ 1.62
TDP1-216ENST00000556867 PRDM6Q9NQX0 595 aa25.14■■□□□ 1.62
TDP1-216ENST00000556867 RCOR1Q9UKL0 485 aa25.14■■□□□ 1.62
TDP1-216ENST00000556867 LZTS1Q9Y250 596 aa25.14■■□□□ 1.62
TDP1-216ENST00000556867 ARL5CA6NH57 179 aa25.13■■□□□ 1.61
TDP1-216ENST00000556867 H0YCG3 227 aa25.13■■□□□ 1.61
TDP1-216ENST00000556867 ZC3H11AO75152 810 aaKnown RBP eCLIP25.13■■□□□ 1.61
TDP1-216ENST00000556867 TBCAO75347 108 aaKnown RBP25.13■■□□□ 1.61
TDP1-216ENST00000556867 MAPTP10636 758 aaKnown RBP25.13■■□□□ 1.61
TDP1-216ENST00000556867 MLH1P40692 756 aa25.13■■□□□ 1.61
TDP1-216ENST00000556867 SV2BQ7L1I2 683 aa25.13■■□□□ 1.61
TDP1-216ENST00000556867 GAD1Q99259 594 aa25.13■■□□□ 1.61
TDP1-216ENST00000556867 ACO2Q99798 780 aaKnown RBP25.13■■□□□ 1.61
TDP1-216ENST00000556867 SPG21Q9NZD8 308 aa25.13■■□□□ 1.61
TDP1-216ENST00000556867 SCP2P22307 547 aa25.12■■□□□ 1.61
TDP1-216ENST00000556867 AKAP5P24588 427 aa25.12■■□□□ 1.61
TDP1-216ENST00000556867 ME1P48163 572 aa25.12■■□□□ 1.61
TDP1-216ENST00000556867 ALDH7A1P49419 539 aaKnown RBP25.12■■□□□ 1.61
TDP1-216ENST00000556867 STRN3Q13033 797 aa25.12■■□□□ 1.61
TDP1-216ENST00000556867 SKIV2LQ15477 1246 aaKnown RBP25.12■■□□□ 1.61
TDP1-216ENST00000556867 APBB1IPQ7Z5R6 666 aaPredicted RBP25.12■■□□□ 1.61
TDP1-216ENST00000556867 MYCT1Q8N699 235 aa25.12■■□□□ 1.61
TDP1-216ENST00000556867 PDILTQ8N807 584 aa25.12■■□□□ 1.61
TDP1-216ENST00000556867 MRPS27Q92552 414 aaKnown RBP25.12■■□□□ 1.61
TDP1-216ENST00000556867 ZFP42Q96MM3 310 aa25.12■■□□□ 1.61
TDP1-216ENST00000556867 TARS2Q9BW92 718 aaKnown RBP25.12■■□□□ 1.61
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms