RNA–Protein interactions for RNA: ENST00000556737.1

SHMT2-224, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 572 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-224ENST00000556737 NPTXRO95502 500 aa11.42□□□□□ -0.58
SHMT2-224ENST00000556737 GALTP07902 379 aa11.42□□□□□ -0.58
SHMT2-224ENST00000556737 ITGA4P13612 1032 aa11.42□□□□□ -0.58
SHMT2-224ENST00000556737 MLH1P40692 756 aa11.42□□□□□ -0.58
SHMT2-224ENST00000556737 NDUFV1P49821 464 aa11.42□□□□□ -0.58
SHMT2-224ENST00000556737 PUS10Q3MIT2 529 aaKnown RBP11.42□□□□□ -0.58
SHMT2-224ENST00000556737 TMEM119Q4V9L6 283 aa11.42□□□□□ -0.58
SHMT2-224ENST00000556737 KRT79Q5XKE5 535 aa11.42□□□□□ -0.58
SHMT2-224ENST00000556737 ARL6IP4Q66PJ3 421 aaKnown RBP11.42□□□□□ -0.58
SHMT2-224ENST00000556737 SLC27A1Q6PCB7 646 aa11.42□□□□□ -0.58
SHMT2-224ENST00000556737 EP400NLQ6ZTU2 488 aa11.42□□□□□ -0.58
SHMT2-224ENST00000556737 BRAPQ7Z569 592 aa11.42□□□□□ -0.58
SHMT2-224ENST00000556737 FAM178BQ8IXR5 827 aa11.42□□□□□ -0.58
SHMT2-224ENST00000556737 SMRP1Q8NCR6 262 aa11.42□□□□□ -0.58
SHMT2-224ENST00000556737 CNNM3Q8NE01 707 aa11.42□□□□□ -0.58
SHMT2-224ENST00000556737 URGCPQ8TCY9 931 aa11.42□□□□□ -0.58
SHMT2-224ENST00000556737 LRRC15Q8TF66 581 aa11.42□□□□□ -0.58
SHMT2-224ENST00000556737 KHSRPQ92945 711 aaKnown RBP eCLIP11.42□□□□□ -0.58
SHMT2-224ENST00000556737 PPP2R3CQ969Q6 453 aa11.42□□□□□ -0.58
SHMT2-224ENST00000556737 IGSF21Q96ID5 467 aa11.42□□□□□ -0.58
SHMT2-224ENST00000556737 ZFP42Q96MM3 310 aa11.42□□□□□ -0.58
SHMT2-224ENST00000556737 RUSC1Q9BVN2 902 aa11.42□□□□□ -0.58
SHMT2-224ENST00000556737 ZBP1Q9H171 429 aa11.42□□□□□ -0.58
SHMT2-224ENST00000556737 C2orf40Q9H1Z8 148 aa11.42□□□□□ -0.58
SHMT2-224ENST00000556737 PDZD7Q9H5P4 517 aa11.42□□□□□ -0.58
SHMT2-224ENST00000556737 POLD4Q9HCU8 107 aa11.42□□□□□ -0.58
SHMT2-224ENST00000556737 ENTPD7Q9NQZ7 604 aa11.42□□□□□ -0.58
SHMT2-224ENST00000556737 MARCH5Q9NX47 278 aa11.42□□□□□ -0.58
SHMT2-224ENST00000556737 VPS37CA5D8V6 355 aaPredicted RBP11.41□□□□□ -0.58
SHMT2-224ENST00000556737 C2orf71A6NGG8 1288 aa11.41□□□□□ -0.58
SHMT2-224ENST00000556737 ARL5CA6NH57 179 aa11.41□□□□□ -0.58
SHMT2-224ENST00000556737 POMCP01189 267 aa11.41□□□□□ -0.58
SHMT2-224ENST00000556737 PRKCBP05771 671 aa11.41□□□□□ -0.58
SHMT2-224ENST00000556737 ALDH7A1P49419 539 aaKnown RBP11.41□□□□□ -0.58
SHMT2-224ENST00000556737 SCNN1GP51170 649 aa11.41□□□□□ -0.58
SHMT2-224ENST00000556737 KRT17Q04695 432 aa11.41□□□□□ -0.58
SHMT2-224ENST00000556737 GRIN1Q05586 938 aa11.41□□□□□ -0.58
SHMT2-224ENST00000556737 RNASELQ05823 741 aaKnown RBP11.41□□□□□ -0.58
SHMT2-224ENST00000556737 DSC1Q08554 894 aa11.41□□□□□ -0.58
SHMT2-224ENST00000556737 COASYQ13057 564 aa11.41□□□□□ -0.58
SHMT2-224ENST00000556737 RESTQ13127 1097 aa11.41□□□□□ -0.58
SHMT2-224ENST00000556737 SMAD4Q13485 552 aaKnown RBP11.41□□□□□ -0.58
SHMT2-224ENST00000556737 SMAD2Q15796 467 aaKnown RBP11.41□□□□□ -0.58
SHMT2-224ENST00000556737 EEF1DP3Q658K8 133 aa11.41□□□□□ -0.58
SHMT2-224ENST00000556737 ZBTB8OSQ8IWT0 167 aa11.41□□□□□ -0.58
SHMT2-224ENST00000556737 GSTCDQ8NEC7 633 aa11.41□□□□□ -0.58
SHMT2-224ENST00000556737 DEPTORQ8TB45 409 aa11.41□□□□□ -0.58
SHMT2-224ENST00000556737 KIFAP3Q92845 792 aa11.41□□□□□ -0.58
SHMT2-224ENST00000556737 TMEM169Q96HH4 297 aa11.41□□□□□ -0.58
SHMT2-224ENST00000556737 INTS4Q96HW7 963 aaKnown RBP11.41□□□□□ -0.58
SHMT2-224ENST00000556737 GAD1Q99259 594 aa11.41□□□□□ -0.58
SHMT2-224ENST00000556737 CDCA3Q99618 268 aaPredicted RBP11.41□□□□□ -0.58
SHMT2-224ENST00000556737 TMEM175Q9BSA9 504 aa11.41□□□□□ -0.58
SHMT2-224ENST00000556737 GBP3Q9H0R5 595 aa11.41□□□□□ -0.58
SHMT2-224ENST00000556737 TLE6Q9H808 572 aa11.41□□□□□ -0.58
SHMT2-224ENST00000556737 NGRNQ9NPE2 291 aaKnown RBP11.41□□□□□ -0.58
SHMT2-224ENST00000556737 UBN1Q9NPG3 1134 aa11.41□□□□□ -0.58
SHMT2-224ENST00000556737 MIOSQ9NXC5 875 aa11.41□□□□□ -0.58
SHMT2-224ENST00000556737 PUF60Q9UHX1 559 aaKnown RBP11.41□□□□□ -0.58
SHMT2-224ENST00000556737 CD207Q9UJ71 328 aa11.41□□□□□ -0.58
SHMT2-224ENST00000556737 DNM3Q9UQ16 869 aa11.41□□□□□ -0.58
SHMT2-224ENST00000556737 USP20Q9Y2K6 914 aa11.41□□□□□ -0.58
SHMT2-224ENST00000556737 PHLPP2Q6ZVD8 1323 aa11.4□□□□□ -0.58
SHMT2-224ENST00000556737 MYH11P35749 1972 aa11.4□□□□□ -0.58
SHMT2-224ENST00000556737 FSD2A1L4K1 749 aa11.4□□□□□ -0.58
SHMT2-224ENST00000556737 ACKR2O00590 384 aa11.4□□□□□ -0.58
SHMT2-224ENST00000556737 HIP1RO75146 1068 aa11.4□□□□□ -0.58
SHMT2-224ENST00000556737 EFEMP2O95967 443 aa11.4□□□□□ -0.58
SHMT2-224ENST00000556737 AKAP5P24588 427 aa11.4□□□□□ -0.58
SHMT2-224ENST00000556737 GUCY2CP25092 1073 aa11.4□□□□□ -0.58
SHMT2-224ENST00000556737 SLC12A3P55017 1021 aa11.4□□□□□ -0.58
SHMT2-224ENST00000556737 ZP2Q05996 745 aa11.4□□□□□ -0.58
SHMT2-224ENST00000556737 PRPF4BQ13523 1007 aaKnown RBP11.4□□□□□ -0.58
SHMT2-224ENST00000556737 SMC1AQ14683 1233 aaKnown RBP11.4□□□□□ -0.58
SHMT2-224ENST00000556737 PPP2R5AQ15172 486 aa11.4□□□□□ -0.58
SHMT2-224ENST00000556737 SF3A1Q15459 793 aaKnown RBP11.4□□□□□ -0.58
SHMT2-224ENST00000556737 MAPK6Q16659 721 aa11.4□□□□□ -0.58
SHMT2-224ENST00000556737 RINT1Q6NUQ1 792 aa11.4□□□□□ -0.58
SHMT2-224ENST00000556737 C1orf186Q6ZWK4 172 aa11.4□□□□□ -0.58
SHMT2-224ENST00000556737 TAS1R3Q7RTX0 852 aa11.4□□□□□ -0.58
SHMT2-224ENST00000556737 DDX53Q86TM3 631 aaKnown RBP11.4□□□□□ -0.58
SHMT2-224ENST00000556737 COLGALT2Q8IYK4 626 aa11.4□□□□□ -0.58
SHMT2-224ENST00000556737 RNF168Q8IYW5 571 aaPredicted RBP11.4□□□□□ -0.58
SHMT2-224ENST00000556737 MICAL1Q8TDZ2 1067 aa11.4□□□□□ -0.58
SHMT2-224ENST00000556737 AUTS2Q8WXX7 1259 aa11.4□□□□□ -0.58
SHMT2-224ENST00000556737 APOL6Q9BWW8 343 aa11.4□□□□□ -0.58
SHMT2-224ENST00000556737 TRIM6Q9C030 488 aaPredicted RBP11.4□□□□□ -0.58
SHMT2-224ENST00000556737 ARHGAP28Q9P2N2 729 aa11.4□□□□□ -0.58
SHMT2-224ENST00000556737 GIT1Q9Y2X7 761 aa11.4□□□□□ -0.58
SHMT2-224ENST00000556737 PLXNA3P51805 1871 aa11.4□□□□□ -0.59
SHMT2-224ENST00000556737 DENND4AQ7Z401 1863 aa11.4□□□□□ -0.59
SHMT2-224ENST00000556737 CARNS1A5YM72 827 aa11.39□□□□□ -0.59
SHMT2-224ENST00000556737 C19orf67A6NJJ6 358 aa11.39□□□□□ -0.59
SHMT2-224ENST00000556737 F8W810 466 aa11.39□□□□□ -0.59
SHMT2-224ENST00000556737 NRP1O14786 923 aa11.39□□□□□ -0.59
SHMT2-224ENST00000556737 N4BP3O15049 544 aa11.39□□□□□ -0.59
SHMT2-224ENST00000556737 CTSAP10619 480 aa11.39□□□□□ -0.59
SHMT2-224ENST00000556737 SYT1P21579 422 aa11.39□□□□□ -0.59
SHMT2-224ENST00000556737 NPTX2P47972 431 aa11.39□□□□□ -0.59
SHMT2-224ENST00000556737 PEX3P56589 373 aa11.39□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms