RNA–Protein interactions for RNA: ENST00000556375.5

SLIRP-206, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2

Gene SLIRP, Length 408 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-206ENST00000556375 CDR2LQ86X02 465 aaPredicted RBP12.71□□□□□ -0.37
SLIRP-206ENST00000556375 SLC39A11Q8N1S5 342 aa12.71□□□□□ -0.37
SLIRP-206ENST00000556375 KRI1Q8N9T8 703 aaKnown RBP12.71□□□□□ -0.37
SLIRP-206ENST00000556375 RAD54LQ92698 747 aa12.71□□□□□ -0.37
SLIRP-206ENST00000556375 SYMPKQ92797 1274 aaKnown RBP12.71□□□□□ -0.37
SLIRP-206ENST00000556375 HLA-CQ95604 372 aa12.71□□□□□ -0.37
SLIRP-206ENST00000556375 ZNF396Q96N95 335 aaPredicted RBP12.71□□□□□ -0.37
SLIRP-206ENST00000556375 NXF3Q9H4D5 531 aaKnown RBP12.71□□□□□ -0.37
SLIRP-206ENST00000556375 PDZD7Q9H5P4 517 aa12.71□□□□□ -0.37
SLIRP-206ENST00000556375 KMT5AQ9NQR1 393 aa12.71□□□□□ -0.37
SLIRP-206ENST00000556375 TLR9Q9NR96 1032 aa12.71□□□□□ -0.37
SLIRP-206ENST00000556375 BLOC1S4Q9NUP1 217 aa12.71□□□□□ -0.37
SLIRP-206ENST00000556375 SPG21Q9NZD8 308 aa12.71□□□□□ -0.37
SLIRP-206ENST00000556375 NCOR1O75376 2440 aa12.7□□□□□ -0.38
SLIRP-206ENST00000556375 TTLL13PA6NNM8 815 aa12.7□□□□□ -0.38
SLIRP-206ENST00000556375 CSPG5O95196 566 aa12.7□□□□□ -0.38
SLIRP-206ENST00000556375 YEATS4O95619 227 aa12.7□□□□□ -0.38
SLIRP-206ENST00000556375 PLS3P13797 630 aa12.7□□□□□ -0.38
SLIRP-206ENST00000556375 LIG1P18858 919 aa12.7□□□□□ -0.38
SLIRP-206ENST00000556375 MLH1P40692 756 aa12.7□□□□□ -0.38
SLIRP-206ENST00000556375 ALDH7A1P49419 539 aaKnown RBP12.7□□□□□ -0.38
SLIRP-206ENST00000556375 BCAR1P56945 870 aa12.7□□□□□ -0.38
SLIRP-206ENST00000556375 RAD51AP2Q09MP3 1159 aa12.7□□□□□ -0.38
SLIRP-206ENST00000556375 COL19A1Q14993 1142 aa12.7□□□□□ -0.38
SLIRP-206ENST00000556375 STK38Q15208 465 aa12.7□□□□□ -0.38
SLIRP-206ENST00000556375 TMEM132AQ24JP5 1023 aa12.7□□□□□ -0.38
SLIRP-206ENST00000556375 ARSHQ5FYA8 562 aa12.7□□□□□ -0.38
SLIRP-206ENST00000556375 USP49Q70CQ1 688 aa12.7□□□□□ -0.38
SLIRP-206ENST00000556375 GPBP1Q86WP2 473 aa12.7□□□□□ -0.38
SLIRP-206ENST00000556375 SPRYD3Q8NCJ5 442 aa12.7□□□□□ -0.38
SLIRP-206ENST00000556375 LINC00301Q8NCQ3 95 aa12.7□□□□□ -0.38
SLIRP-206ENST00000556375 SPIRE2Q8WWL2 714 aa12.7□□□□□ -0.38
SLIRP-206ENST00000556375 MRPS27Q92552 414 aaKnown RBP12.7□□□□□ -0.38
SLIRP-206ENST00000556375 LARP4BQ92615 738 aaKnown RBP12.7□□□□□ -0.38
SLIRP-206ENST00000556375 PPP2R3CQ969Q6 453 aa12.7□□□□□ -0.38
SLIRP-206ENST00000556375 EPSTI1Q96J88 318 aa12.7□□□□□ -0.38
SLIRP-206ENST00000556375 CLIC6Q96NY7 704 aa12.7□□□□□ -0.38
SLIRP-206ENST00000556375 ASB2Q96Q27 587 aa12.7□□□□□ -0.38
SLIRP-206ENST00000556375 ADPGKQ9BRR6 497 aa12.7□□□□□ -0.38
SLIRP-206ENST00000556375 RNF39Q9H2S5 420 aa12.7□□□□□ -0.38
SLIRP-206ENST00000556375 TMEM134Q9H6X4 195 aa12.7□□□□□ -0.38
SLIRP-206ENST00000556375 NRDE2Q9H7Z3 1164 aa12.7□□□□□ -0.38
SLIRP-206ENST00000556375 UBE2ZQ9H832 354 aaPredicted RBP12.7□□□□□ -0.38
SLIRP-206ENST00000556375 KANSL3Q9P2N6 904 aa12.7□□□□□ -0.38
SLIRP-206ENST00000556375 STK17AQ9UEE5 414 aa12.7□□□□□ -0.38
SLIRP-206ENST00000556375 CCDC39Q9UFE4 941 aa12.7□□□□□ -0.38
SLIRP-206ENST00000556375 KCNG1Q9UIX4 513 aa12.7□□□□□ -0.38
SLIRP-206ENST00000556375 ODF2LQ9ULJ1 636 aa12.7□□□□□ -0.38
SLIRP-206ENST00000556375 GIT1Q9Y2X7 761 aa12.7□□□□□ -0.38
SLIRP-206ENST00000556375 RBM19Q9Y4C8 960 aaKnown RBP12.7□□□□□ -0.38
SLIRP-206ENST00000556375 HES2Q9Y543 173 aa12.7□□□□□ -0.38
SLIRP-206ENST00000556375 ARL5CA6NH57 179 aa12.69□□□□□ -0.38
SLIRP-206ENST00000556375 K7ERI5 159 aa12.69□□□□□ -0.38
SLIRP-206ENST00000556375 NCK2O43639 380 aa12.69□□□□□ -0.38
SLIRP-206ENST00000556375 B4GALT3O60512 393 aa12.69□□□□□ -0.38
SLIRP-206ENST00000556375 IRS1P35568 1242 aa12.69□□□□□ -0.38
SLIRP-206ENST00000556375 AFF1P51825 1210 aaKnown RBP12.69□□□□□ -0.38
SLIRP-206ENST00000556375 TFF2Q03403 129 aa12.69□□□□□ -0.38
SLIRP-206ENST00000556375 KRT17Q04695 432 aa12.69□□□□□ -0.38
SLIRP-206ENST00000556375 PKP1Q13835 747 aa12.69□□□□□ -0.38
SLIRP-206ENST00000556375 MCM6Q14566 821 aa12.69□□□□□ -0.38
SLIRP-206ENST00000556375 DCAF4L1Q3SXM0 396 aa12.69□□□□□ -0.38
SLIRP-206ENST00000556375 SPECC1Q5M775 1068 aa12.69□□□□□ -0.38
SLIRP-206ENST00000556375 ATF7IP2Q5U623 682 aa12.69□□□□□ -0.38
SLIRP-206ENST00000556375 FOXD4L5Q5VV16 416 aaPredicted RBP12.69□□□□□ -0.38
SLIRP-206ENST00000556375 EEF1DP3Q658K8 133 aa12.69□□□□□ -0.38
SLIRP-206ENST00000556375 PDE12Q6L8Q7 609 aaKnown RBP12.69□□□□□ -0.38
SLIRP-206ENST00000556375 APBB1IPQ7Z5R6 666 aaPredicted RBP12.69□□□□□ -0.38
SLIRP-206ENST00000556375 FOXD4L4Q8WXT5 416 aaPredicted RBP12.69□□□□□ -0.38
SLIRP-206ENST00000556375 PABPC5Q96DU9 382 aaKnown RBP12.69□□□□□ -0.38
SLIRP-206ENST00000556375 TMEM169Q96HH4 297 aa12.69□□□□□ -0.38
SLIRP-206ENST00000556375 GAD1Q99259 594 aa12.69□□□□□ -0.38
SLIRP-206ENST00000556375 REEP2Q9BRK0 252 aa12.69□□□□□ -0.38
SLIRP-206ENST00000556375 NTPCRQ9BSD7 190 aaKnown RBP12.69□□□□□ -0.38
SLIRP-206ENST00000556375 APOL6Q9BWW8 343 aa12.69□□□□□ -0.38
SLIRP-206ENST00000556375 LARSQ9P2J5 1176 aaKnown RBP12.69□□□□□ -0.38
SLIRP-206ENST00000556375 PUF60Q9UHX1 559 aaKnown RBP12.69□□□□□ -0.38
SLIRP-206ENST00000556375 CITO14578 2027 aa12.69□□□□□ -0.38
SLIRP-206ENST00000556375 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP12.68□□□□□ -0.38
SLIRP-206ENST00000556375 NPHP3-ACAD11A0A0J9YXS1 232 aa12.68□□□□□ -0.38
SLIRP-206ENST00000556375 SFI1A8K8P3 1242 aa12.68□□□□□ -0.38
SLIRP-206ENST00000556375 H0YCG3 227 aa12.68□□□□□ -0.38
SLIRP-206ENST00000556375 FSCN2O14926 492 aa12.68□□□□□ -0.38
SLIRP-206ENST00000556375 SPTLC2O15270 562 aa12.68□□□□□ -0.38
SLIRP-206ENST00000556375 SLC16A4O15374 487 aa12.68□□□□□ -0.38
SLIRP-206ENST00000556375 PPP6R2O75170 966 aa12.68□□□□□ -0.38
SLIRP-206ENST00000556375 POMCP01189 267 aa12.68□□□□□ -0.38
SLIRP-206ENST00000556375 GALTP07902 379 aa12.68□□□□□ -0.38
SLIRP-206ENST00000556375 SLC11A1P49279 550 aa12.68□□□□□ -0.38
SLIRP-206ENST00000556375 SCNN1GP51170 649 aa12.68□□□□□ -0.38
SLIRP-206ENST00000556375 ZNF131P52739 623 aa12.68□□□□□ -0.38
SLIRP-206ENST00000556375 SMTNP53814 917 aa12.68□□□□□ -0.38
SLIRP-206ENST00000556375 CACNB1Q02641 598 aaPredicted RBP12.68□□□□□ -0.38
SLIRP-206ENST00000556375 HYAL1Q12794 435 aa12.68□□□□□ -0.38
SLIRP-206ENST00000556375 DHX8Q14562 1220 aaKnown RBP12.68□□□□□ -0.38
SLIRP-206ENST00000556375 NT5DC1Q5TFE4 455 aa12.68□□□□□ -0.38
SLIRP-206ENST00000556375 ATL3Q6DD88 541 aa12.68□□□□□ -0.38
SLIRP-206ENST00000556375 TAS1R3Q7RTX0 852 aa12.68□□□□□ -0.38
SLIRP-206ENST00000556375 TMEM173Q86WV6 379 aaPredicted RBP12.68□□□□□ -0.38
SLIRP-206ENST00000556375 ZNF280BQ86YH2 543 aa12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms