RNA–Protein interactions for RNA: ENST00000556268.1

GTF2A1-204, Transcript of general transcription factor IIA subunit 1, humanhuman

TSL 5

Gene GTF2A1, Length 864 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A1-204ENST00000556268 BRDTQ58F21 947 aaPredicted RBP10.47□□□□□ -0.73
GTF2A1-204ENST00000556268 SCARA3Q6AZY7 606 aa10.47□□□□□ -0.73
GTF2A1-204ENST00000556268 SLC30A10Q6XR72 485 aa10.47□□□□□ -0.73
GTF2A1-204ENST00000556268 DEFB128Q7Z7B8 93 aa10.47□□□□□ -0.73
GTF2A1-204ENST00000556268 HERC6Q8IVU3 1022 aa10.47□□□□□ -0.73
GTF2A1-204ENST00000556268 ANKS1AQ92625 1134 aa10.47□□□□□ -0.73
GTF2A1-204ENST00000556268 COPS5Q92905 334 aa10.47□□□□□ -0.73
GTF2A1-204ENST00000556268 GAL3ST3Q96A11 431 aa10.47□□□□□ -0.73
GTF2A1-204ENST00000556268 SLC9A7Q96T83 725 aa10.47□□□□□ -0.73
GTF2A1-204ENST00000556268 LRRC4CQ9HCJ2 640 aa10.47□□□□□ -0.73
GTF2A1-204ENST00000556268 RAPGEFL1Q9UHV5 662 aa10.47□□□□□ -0.73
GTF2A1-204ENST00000556268 COG5Q9UP83 839 aa10.47□□□□□ -0.73
GTF2A1-204ENST00000556268 B4DLN1 442 aa10.46□□□□□ -0.73
GTF2A1-204ENST00000556268 BAIAP3O94812 1187 aa10.46□□□□□ -0.73
GTF2A1-204ENST00000556268 ARIH2O95376 493 aa10.46□□□□□ -0.73
GTF2A1-204ENST00000556268 FAM87AP0C7U9 286 aa10.46□□□□□ -0.73
GTF2A1-204ENST00000556268 TXNP10599 105 aaKnown RBP10.46□□□□□ -0.73
GTF2A1-204ENST00000556268 CALML3P27482 149 aa10.46□□□□□ -0.73
GTF2A1-204ENST00000556268 MRPL12P52815 198 aaKnown RBP10.46□□□□□ -0.73
GTF2A1-204ENST00000556268 PDE1AP54750 535 aa10.46□□□□□ -0.73
GTF2A1-204ENST00000556268 RBL2Q08999 1139 aa10.46□□□□□ -0.73
GTF2A1-204ENST00000556268 BFSP2Q13515 415 aa10.46□□□□□ -0.73
GTF2A1-204ENST00000556268 OGFOD3Q6PK18 319 aa10.46□□□□□ -0.73
GTF2A1-204ENST00000556268 TBC1D5Q92609 795 aa10.46□□□□□ -0.73
GTF2A1-204ENST00000556268 KAT2BQ92831 832 aa10.46□□□□□ -0.73
GTF2A1-204ENST00000556268 FAM227BQ96M60 508 aa10.46□□□□□ -0.73
GTF2A1-204ENST00000556268 C1QTNF1Q9BXJ1 281 aa10.46□□□□□ -0.73
GTF2A1-204ENST00000556268 SSU72Q9NP77 194 aaKnown RBP10.46□□□□□ -0.73
GTF2A1-204ENST00000556268 LMCD1Q9NZU5 365 aa10.46□□□□□ -0.73
GTF2A1-204ENST00000556268 PCOLCE2Q9UKZ9 415 aa10.46□□□□□ -0.73
GTF2A1-204ENST00000556268 ZMYM6O95789 1325 aa10.46□□□□□ -0.73
GTF2A1-204ENST00000556268 FRMPD2Q68DX3 1309 aaPredicted RBP10.46□□□□□ -0.73
GTF2A1-204ENST00000556268 LCTP09848 1927 aa10.46□□□□□ -0.74
GTF2A1-204ENST00000556268 TET1Q8NFU7 2136 aa10.45□□□□□ -0.74
GTF2A1-204ENST00000556268 KIF28PB7ZC32 967 aa10.45□□□□□ -0.74
GTF2A1-204ENST00000556268 PARNO95453 639 aaKnown RBP10.45□□□□□ -0.74
GTF2A1-204ENST00000556268 CXCL10P02778 98 aa10.45□□□□□ -0.74
GTF2A1-204ENST00000556268 KCNQ1P51787 676 aa10.45□□□□□ -0.74
GTF2A1-204ENST00000556268 PPP2R5BQ15173 497 aa10.45□□□□□ -0.74
GTF2A1-204ENST00000556268 FAM47CQ5HY64 1035 aa10.45□□□□□ -0.74
GTF2A1-204ENST00000556268 C12orf40Q86WS4 652 aa10.45□□□□□ -0.74
GTF2A1-204ENST00000556268 DGKHQ86XP1 1220 aa10.45□□□□□ -0.74
GTF2A1-204ENST00000556268 CAGE1Q8TC20 777 aa10.45□□□□□ -0.74
GTF2A1-204ENST00000556268 AFAP1L1Q8TED9 768 aa10.45□□□□□ -0.74
GTF2A1-204ENST00000556268 PPP1R13LQ8WUF5 828 aa10.45□□□□□ -0.74
GTF2A1-204ENST00000556268 AFG1LQ8WV93 481 aa10.45□□□□□ -0.74
GTF2A1-204ENST00000556268 IWS1Q96ST2 819 aa10.45□□□□□ -0.74
GTF2A1-204ENST00000556268 MPHOSPH6Q99547 160 aaKnown RBP10.45□□□□□ -0.74
GTF2A1-204ENST00000556268 CERS4Q9HA82 394 aa10.45□□□□□ -0.74
GTF2A1-204ENST00000556268 RAD50Q92878 1312 aa10.44□□□□□ -0.74
GTF2A1-204ENST00000556268 A0A0D9SFI3 127 aa10.44□□□□□ -0.74
GTF2A1-204ENST00000556268 CTSHP09668 335 aa10.44□□□□□ -0.74
GTF2A1-204ENST00000556268 NT5C2P49902 561 aa10.44□□□□□ -0.74
GTF2A1-204ENST00000556268 RING1Q06587 406 aa10.44□□□□□ -0.74
GTF2A1-204ENST00000556268 ARHGAP1Q07960 439 aa10.44□□□□□ -0.74
GTF2A1-204ENST00000556268 GRB10Q13322 594 aa10.44□□□□□ -0.74
GTF2A1-204ENST00000556268 PTGISQ16647 500 aa10.44□□□□□ -0.74
GTF2A1-204ENST00000556268 RRP12Q5JTH9 1297 aaKnown RBP10.44□□□□□ -0.74
GTF2A1-204ENST00000556268 GPATCH4Q5T3I0 446 aaKnown RBP10.44□□□□□ -0.74
GTF2A1-204ENST00000556268 ANKRD45Q5TZF3 282 aa10.44□□□□□ -0.74
GTF2A1-204ENST00000556268 KRT40Q6A162 431 aa10.44□□□□□ -0.74
GTF2A1-204ENST00000556268 LRFN4Q6PJG9 635 aa10.44□□□□□ -0.74
GTF2A1-204ENST00000556268 MFSD6Q6ZSS7 791 aa10.44□□□□□ -0.74
GTF2A1-204ENST00000556268 UBE3DQ7Z6J8 389 aa10.44□□□□□ -0.74
GTF2A1-204ENST00000556268 ZNF589Q86UQ0 364 aaPredicted RBP10.44□□□□□ -0.74
GTF2A1-204ENST00000556268 SYTL5Q8TDW5 730 aaPredicted RBP10.44□□□□□ -0.74
GTF2A1-204ENST00000556268 ARNTL2Q8WYA1 636 aa10.44□□□□□ -0.74
GTF2A1-204ENST00000556268 TAAR1Q96RJ0 339 aa10.44□□□□□ -0.74
GTF2A1-204ENST00000556268 FTOQ9C0B1 505 aaKnown RBP eCLIP10.44□□□□□ -0.74
GTF2A1-204ENST00000556268 EPHX3Q9H6B9 360 aa10.44□□□□□ -0.74
GTF2A1-204ENST00000556268 DDX41Q9UJV9 622 aaKnown RBP10.44□□□□□ -0.74
GTF2A1-204ENST00000556268 TCF20Q9UGU0 1960 aaKnown RBP10.44□□□□□ -0.74
GTF2A1-204ENST00000556268 GBF1Q92538 1859 aa10.43□□□□□ -0.74
GTF2A1-204ENST00000556268 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP10.43□□□□□ -0.74
GTF2A1-204ENST00000556268 HAS3O00219 553 aa10.43□□□□□ -0.74
GTF2A1-204ENST00000556268 EIF3JO75822 258 aaKnown RBP10.43□□□□□ -0.74
GTF2A1-204ENST00000556268 GH1P01241 217 aa10.43□□□□□ -0.74
GTF2A1-204ENST00000556268 CASTP20810 708 aaKnown RBP10.43□□□□□ -0.74
GTF2A1-204ENST00000556268 PLA2G5P39877 138 aa10.43□□□□□ -0.74
GTF2A1-204ENST00000556268 WDR5P61964 334 aaKnown RBP10.43□□□□□ -0.74
GTF2A1-204ENST00000556268 HDAC1Q13547 482 aaPredicted RBP10.43□□□□□ -0.74
GTF2A1-204ENST00000556268 INPP5AQ14642 412 aa10.43□□□□□ -0.74
GTF2A1-204ENST00000556268 STXBP2Q15833 593 aa10.43□□□□□ -0.74
GTF2A1-204ENST00000556268 LY6KQ17RY6 165 aa10.43□□□□□ -0.74
GTF2A1-204ENST00000556268 ZBTB37Q5TC79 503 aa10.43□□□□□ -0.74
GTF2A1-204ENST00000556268 PDZRN4Q6ZMN7 1036 aaPredicted RBP10.43□□□□□ -0.74
GTF2A1-204ENST00000556268 SPRED2Q7Z698 418 aa10.43□□□□□ -0.74
GTF2A1-204ENST00000556268 NSUN6Q8TEA1 469 aaKnown RBP10.43□□□□□ -0.74
GTF2A1-204ENST00000556268 DHX38Q92620 1227 aaKnown RBP10.43□□□□□ -0.74
GTF2A1-204ENST00000556268 ELMO3Q96BJ8 720 aa10.43□□□□□ -0.74
GTF2A1-204ENST00000556268 UBA5Q9GZZ9 404 aa10.43□□□□□ -0.74
GTF2A1-204ENST00000556268 COL20A1Q9P218 1284 aa10.43□□□□□ -0.74
GTF2A1-204ENST00000556268 ZC3H7BQ9UGR2 993 aaKnown RBP10.43□□□□□ -0.74
GTF2A1-204ENST00000556268 LRRC37A2A6NM11 1700 aa10.43□□□□□ -0.74
GTF2A1-204ENST00000556268 SCN5AQ14524 2016 aa10.42□□□□□ -0.74
GTF2A1-204ENST00000556268 ABHD14A-ACY1A0A1B0GW23 586 aa10.42□□□□□ -0.74
GTF2A1-204ENST00000556268 NBNO60934 754 aa10.42□□□□□ -0.74
GTF2A1-204ENST00000556268 PPFIA4O75335 1185 aa10.42□□□□□ -0.74
GTF2A1-204ENST00000556268 LEFTY1O75610 366 aa10.42□□□□□ -0.74
GTF2A1-204ENST00000556268 MMP3P08254 477 aa10.42□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms